RNA–Protein interactions for RNA: ENST00000308664.10

ATP2A2-201, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2A2, Length 4,453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2-201ENST00000308664 GPRIN1Q7Z2K8 1008 aa17.71■□□□□ 0.43
ATP2A2-201ENST00000308664 RERGQ96A58 199 aaPredicted RBP17.71■□□□□ 0.43
ATP2A2-201ENST00000308664 TDP1Q9NUW8 608 aa17.71■□□□□ 0.43
ATP2A2-201ENST00000308664 RBM47A0AV96 593 aaKnown RBP17.7■□□□□ 0.42
ATP2A2-201ENST00000308664 C7orf72A4D263 438 aa17.7■□□□□ 0.42
ATP2A2-201ENST00000308664 HTR3EA5X5Y0 456 aa17.7■□□□□ 0.42
ATP2A2-201ENST00000308664 GNRH1P01148 92 aa17.7■□□□□ 0.42
ATP2A2-201ENST00000308664 CSTF2P33240 577 aaKnown RBP eCLIP17.7■□□□□ 0.42
ATP2A2-201ENST00000308664 PSMD4P55036 377 aaKnown RBP17.7■□□□□ 0.42
ATP2A2-201ENST00000308664 ABHD18Q0P651 414 aa17.7■□□□□ 0.42
ATP2A2-201ENST00000308664 TARDBPQ13148 414 aaKnown RBP eCLIP17.7■□□□□ 0.421e-6■■■□□ 15.8
ATP2A2-201ENST00000308664 TUBA3EQ6PEY2 450 aa17.7■□□□□ 0.42
ATP2A2-201ENST00000308664 ZNF433Q8N7K0 673 aaPredicted RBP17.7■□□□□ 0.42
ATP2A2-201ENST00000308664 KCTD13Q8WZ19 329 aa17.7■□□□□ 0.42
ATP2A2-201ENST00000308664 EXOSC8Q96B26 276 aaKnown RBP17.7■□□□□ 0.42
ATP2A2-201ENST00000308664 MYRFLQ96LU7 910 aa17.7■□□□□ 0.42
ATP2A2-201ENST00000308664 GVINP1Q7Z2Y8 2422 aa17.7■□□□□ 0.42
ATP2A2-201ENST00000308664 SCN11AQ9UI33 1791 aa17.7■□□□□ 0.42
ATP2A2-201ENST00000308664 DOT1LQ8TEK3 1739 aa17.7■□□□□ 0.42
ATP2A2-201ENST00000308664 I3L521 148 aa17.7■□□□□ 0.42
ATP2A2-201ENST00000308664 IDSP22304 550 aa17.7■□□□□ 0.42
ATP2A2-201ENST00000308664 STARP49675 285 aa17.7■□□□□ 0.42
ATP2A2-201ENST00000308664 STC1P52823 247 aa17.7■□□□□ 0.42
ATP2A2-201ENST00000308664 DCDC1P59894 354 aa17.7■□□□□ 0.42
ATP2A2-201ENST00000308664 EMX2Q04743 252 aa17.7■□□□□ 0.42
ATP2A2-201ENST00000308664 TBRG1Q3YBR2 411 aa17.7■□□□□ 0.42
ATP2A2-201ENST00000308664 LY6G5CQ5SRR4 150 aa17.7■□□□□ 0.42
ATP2A2-201ENST00000308664 DPY19L2P1Q6NXN4 242 aa17.7■□□□□ 0.42
ATP2A2-201ENST00000308664 MAMDC4Q6UXC1 1216 aa17.7■□□□□ 0.42
ATP2A2-201ENST00000308664 IGFN1Q86VF2 1251 aa17.7■□□□□ 0.42
ATP2A2-201ENST00000308664 ASCC1Q8N9N2 400 aaKnown RBP17.7■□□□□ 0.42
ATP2A2-201ENST00000308664 C7orf57Q8NEG2 295 aa17.7■□□□□ 0.42
ATP2A2-201ENST00000308664 RELTQ969Z4 430 aa17.7■□□□□ 0.42
ATP2A2-201ENST00000308664 FAM118AQ9NWS6 357 aa17.7■□□□□ 0.42
ATP2A2-201ENST00000308664 STOML2Q9UJZ1 356 aa17.7■□□□□ 0.42
ATP2A2-201ENST00000308664 FZD4Q9ULV1 537 aa17.7■□□□□ 0.42
ATP2A2-201ENST00000308664 RUVBL1Q9Y265 456 aaKnown RBP17.7■□□□□ 0.42
ATP2A2-201ENST00000308664 KRBA1A5PL33 1030 aa17.7■□□□□ 0.42
ATP2A2-201ENST00000308664 VILLO15195 856 aa17.7■□□□□ 0.42
ATP2A2-201ENST00000308664 VIPP01282 170 aa17.7■□□□□ 0.42
ATP2A2-201ENST00000308664 SLC2A2P11168 524 aaPredicted RBP17.7■□□□□ 0.42
ATP2A2-201ENST00000308664 SH3BP2P78314 561 aa17.7■□□□□ 0.42
ATP2A2-201ENST00000308664 UPP1Q16831 310 aa17.7■□□□□ 0.42
ATP2A2-201ENST00000308664 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.7■□□□□ 0.42
ATP2A2-201ENST00000308664 PRSS58Q8IYP2 241 aa17.7■□□□□ 0.42
ATP2A2-201ENST00000308664 RASSF5Q8WWW0 418 aa17.7■□□□□ 0.42
ATP2A2-201ENST00000308664 TFAP2CQ92754 450 aa17.7■□□□□ 0.42
ATP2A2-201ENST00000308664 HSH2DQ96JZ2 352 aa17.7■□□□□ 0.42
ATP2A2-201ENST00000308664 FAIM2Q9BWQ8 316 aa17.7■□□□□ 0.42
ATP2A2-201ENST00000308664 PRDM8Q9NQV8 689 aa17.7■□□□□ 0.42
ATP2A2-201ENST00000308664 APC2O95996 2303 aa17.7■□□□□ 0.42
ATP2A2-201ENST00000308664 JUNP05412 331 aaKnown RBP17.7■□□□□ 0.42
ATP2A2-201ENST00000308664 CLCN2P51788 898 aa17.7■□□□□ 0.42
ATP2A2-201ENST00000308664 CLDN10P78369 228 aa17.7■□□□□ 0.42
ATP2A2-201ENST00000308664 TEAD2Q15562 447 aa17.7■□□□□ 0.42
ATP2A2-201ENST00000308664 MS4A13Q5J8X5 152 aa17.7■□□□□ 0.42
ATP2A2-201ENST00000308664 BLOC1S3Q6QNY0 202 aa17.7■□□□□ 0.42
ATP2A2-201ENST00000308664 LILRA2Q8N149 483 aa17.7■□□□□ 0.42
ATP2A2-201ENST00000308664 ACDQ96AP0 544 aa17.7■□□□□ 0.42
ATP2A2-201ENST00000308664 RAD51AP1Q96B01 352 aa17.7■□□□□ 0.42
ATP2A2-201ENST00000308664 PKP4Q99569 1192 aa17.7■□□□□ 0.42
ATP2A2-201ENST00000308664 GSDMCQ9BYG8 508 aa17.7■□□□□ 0.42
ATP2A2-201ENST00000308664 NFKBIL1Q9UBC1 381 aaPredicted RBP17.7■□□□□ 0.42
ATP2A2-201ENST00000308664 ZNF451Q9Y4E5 1061 aa17.7■□□□□ 0.42
ATP2A2-201ENST00000308664 CFAP20Q9Y6A4 193 aaKnown RBP17.7■□□□□ 0.42
ATP2A2-201ENST00000308664 BCAS1O75363 584 aaPredicted RBP17.69■□□□□ 0.42
ATP2A2-201ENST00000308664 C7P10643 843 aa17.69■□□□□ 0.42
ATP2A2-201ENST00000308664 HLA-EP13747 358 aa17.69■□□□□ 0.42
ATP2A2-201ENST00000308664 PRPS1L1P21108 318 aa17.69■□□□□ 0.42
ATP2A2-201ENST00000308664 HTR1EP28566 365 aa17.69■□□□□ 0.42
ATP2A2-201ENST00000308664 PCSK6P29122 969 aa17.69■□□□□ 0.42
ATP2A2-201ENST00000308664 HOXD12P35452 270 aa17.69■□□□□ 0.42
ATP2A2-201ENST00000308664 AFF1P51825 1210 aaKnown RBP17.69■□□□□ 0.42
ATP2A2-201ENST00000308664 PLA2G16P53816 162 aa17.69■□□□□ 0.42
ATP2A2-201ENST00000308664 C9orf43Q8TAL5 461 aaPredicted RBP17.69■□□□□ 0.42
ATP2A2-201ENST00000308664 RDH12Q96NR8 316 aa17.69■□□□□ 0.42
ATP2A2-201ENST00000308664 COL21A1Q96P44 957 aa17.69■□□□□ 0.42
ATP2A2-201ENST00000308664 NPLQ9BXD5 320 aaPredicted RBP17.69■□□□□ 0.42
ATP2A2-201ENST00000308664 NAA50Q9GZZ1 169 aaKnown RBP17.69■□□□□ 0.42
ATP2A2-201ENST00000308664 SUV39H2Q9H5I1 410 aa17.69■□□□□ 0.42
ATP2A2-201ENST00000308664 INSL5Q9Y5Q6 135 aa17.69■□□□□ 0.42
ATP2A2-201ENST00000308664 CPSF4LA6NMK7 179 aaKnown RBP17.69■□□□□ 0.42
ATP2A2-201ENST00000308664 CLDN7O95471 211 aa17.69■□□□□ 0.42
ATP2A2-201ENST00000308664 VEGFBP49765 207 aa17.69■□□□□ 0.42
ATP2A2-201ENST00000308664 CD47Q08722 323 aa17.69■□□□□ 0.42
ATP2A2-201ENST00000308664 RNF44Q7L0R7 432 aa17.69■□□□□ 0.42
ATP2A2-201ENST00000308664 GOLGA7Q7Z5G4 137 aa17.69■□□□□ 0.42
ATP2A2-201ENST00000308664 TAF8Q7Z7C8 310 aa17.69■□□□□ 0.42
ATP2A2-201ENST00000308664 C2orf15Q8WU43 125 aaKnown RBP17.69■□□□□ 0.42
ATP2A2-201ENST00000308664 ABCG4Q9H172 646 aa17.69■□□□□ 0.42
ATP2A2-201ENST00000308664 FLRT1Q9NZU1 646 aa17.69■□□□□ 0.42
ATP2A2-201ENST00000308664 SLC1A7O00341 560 aa17.69■□□□□ 0.42
ATP2A2-201ENST00000308664 FGF19O95750 216 aa17.69■□□□□ 0.42
ATP2A2-201ENST00000308664 SKP1P63208 163 aa17.69■□□□□ 0.42
ATP2A2-201ENST00000308664 C9orf64Q5T6V5 341 aa17.69■□□□□ 0.42
ATP2A2-201ENST00000308664 LCN8Q6JVE9 175 aa17.69■□□□□ 0.42
ATP2A2-201ENST00000308664 GHDCQ8N2G8 530 aa17.69■□□□□ 0.42
ATP2A2-201ENST00000308664 HDDC3Q8N4P3 179 aa17.69■□□□□ 0.42
ATP2A2-201ENST00000308664 FAM110BQ8TC76 370 aa17.69■□□□□ 0.42
ATP2A2-201ENST00000308664 IGSF21Q96ID5 467 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms