RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 RAB21Q9UL25 225 aa10.54□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 SLC22A14Q9Y267 594 aa10.54□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 APC2O95996 2303 aa10.53□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 IGKV1-8A0A0C4DH67 115 aa10.53□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 TEX51A0A1B0GUA7 166 aa10.53□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 TLDC2A0PJX2 215 aa10.53□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 TXNDC9O14530 226 aa10.53□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 CLGNO14967 610 aa10.53□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 NRP2O60462 931 aa10.53□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 CTSVO60911 334 aa10.53□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 SMIM24O75264 130 aa10.53□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 STK16O75716 305 aa10.53□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 NUDT17P0C025 328 aa10.53□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 GNAZP19086 355 aa10.53□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 AGXTP21549 392 aa10.53□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 YBX1P67809 324 aaKnown RBP10.53□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 CDC16Q13042 620 aa10.53□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 TGIF1Q15583 401 aa10.53□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 TECRLQ5HYJ1 363 aa10.53□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 YOD1Q5VVQ6 348 aaPredicted RBP10.53□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 TIFABQ6ZNK6 161 aa10.53□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 VASH2Q86V25 355 aa10.53□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 LCA5Q86VQ0 697 aa10.53□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 KLHDC8AQ8IYD2 350 aa10.53□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 PLD6Q8N2A8 252 aaKnown RBP10.53□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 MREGQ8N565 214 aa10.53□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 PROKR1Q8TCW9 393 aa10.53□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 MR1Q95460 341 aa10.53□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 NKD1Q969G9 470 aa10.53□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 NEIL2Q969S2 332 aa10.53□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 THAP11Q96EK4 314 aa10.53□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 LRFN5Q96NI6 719 aa10.53□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 C17orf62Q9BQA9 187 aa10.53□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 TMEM79Q9BSE2 394 aa10.53□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 CAPS2Q9BXY5 557 aa10.53□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 SPRTNQ9H040 489 aaPredicted RBP10.53□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 PELI2Q9HAT8 420 aa10.53□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 LHX9Q9NQ69 397 aa10.53□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 GPRC5BQ9NZH0 403 aa10.53□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 XPR1Q9UBH6 696 aa10.53□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 OPTCQ9UBM4 332 aa10.53□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 NDOR1Q9UHB4 597 aa10.53□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 PADI1Q9ULC6 663 aa10.53□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 TMCO1Q9UM00 188 aa10.53□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 ANGPTL3Q9Y5C1 460 aa10.53□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 WDFY3Q8IZQ1 3526 aa10.53□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 AHCTF1Q8WYP5 2266 aa10.53□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 FEZF1A0PJY2 475 aa10.52□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 C9J4A7 227 aa10.52□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 H0YGG7 62 aa10.52□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 GOLGA8RI6L899 631 aa10.52□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 HCRTR1O43613 425 aa10.52□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 RFPL1O75677 317 aa10.52□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 GSTA1P08263 222 aa10.52□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 NPPBP16860 134 aa10.52□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 TAC1P20366 129 aa10.52□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 CXCR2P25025 360 aa10.52□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 GGT5P36269 586 aa10.52□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 DLSTP36957 453 aa10.52□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 STAT5AP42229 794 aa10.52□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 GDF5P43026 501 aa10.52□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 SLC6A12P48065 614 aa10.52□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 ARF3P61204 181 aaPredicted RBP10.52□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 CSNK1G2P78368 415 aa10.52□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 RELAQ04206 551 aa10.52□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 TLE3Q04726 772 aa10.52□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 GPS2Q13227 327 aa10.52□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 PDK4Q16654 411 aa10.52□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 NDUFA9Q16795 377 aa10.52□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 PFKFB4Q16877 469 aa10.52□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 FAM214AQ32MH5 1076 aa10.52□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 C18orf21Q32NC0 220 aaPredicted RBP10.52□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 FBXO48Q5FWF7 155 aa10.52□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 WASHC2DQ5SRD0 308 aa10.52□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 PRAMEF17Q5VTA0 474 aa10.52□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 FRMPD2BQ6IN97 320 aa10.52□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 RHBDD2Q6NTF9 364 aa10.52□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 CCDC81Q6ZN84 652 aa10.52□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 TIPARPQ7Z3E1 657 aaKnown RBP10.52□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 DSELQ8IZU8 1212 aa10.52□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 CSNK1A1LQ8N752 337 aa10.52□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 OR2W6PQ8NHA6 318 aa10.52□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 UBTD2Q8WUN7 234 aa10.52□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 HNRNPLLQ8WVV9 542 aaKnown RBP10.52□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 OR4K3Q96R72 315 aa10.52□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 DPH2Q9BQC3 489 aaPredicted RBP10.52□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 AIF1LQ9BQI0 150 aa10.52□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 CD244Q9BZW8 370 aa10.52□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 MRPL46Q9H2W6 279 aaKnown RBP10.52□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 CUTCQ9NTM9 273 aa10.52□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 GPN3Q9UHW5 284 aaPredicted RBP10.52□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 KCND3Q9UK17 655 aa10.52□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 PTBP2Q9UKA9 531 aaKnown RBP10.52□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 CROTQ9UKG9 612 aa10.52□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 SH2B3Q9UQQ2 575 aa10.52□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 PLAAQ9Y263 795 aa10.52□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 TNPO3Q9Y5L0 923 aaKnown RBP10.52□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 MAP1BP46821 2468 aaKnown RBP10.52□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 AKAP13Q12802 2813 aa10.52□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 SCN3AQ9NY46 2000 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms