RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 DUOXA1Q1HG43 343 aa18.74■□□□□ 0.59
HOXC4-201ENST00000303406 PLA2G4EQ3MJ16 856 aa18.74■□□□□ 0.59
HOXC4-201ENST00000303406 PRAMEF14Q5SWL7 426 aa18.74■□□□□ 0.59
HOXC4-201ENST00000303406 PRAMEF13Q5VWM6 474 aa18.74■□□□□ 0.59
HOXC4-201ENST00000303406 OR52E8Q6IFG1 317 aa18.74■□□□□ 0.59
HOXC4-201ENST00000303406 ZBTB49Q6ZSB9 765 aa18.74■□□□□ 0.59
HOXC4-201ENST00000303406 MICU2Q8IYU8 434 aa18.74■□□□□ 0.59
HOXC4-201ENST00000303406 OR5K2Q8NHB8 316 aa18.74■□□□□ 0.59
HOXC4-201ENST00000303406 ASB12Q8WXK4 309 aa18.74■□□□□ 0.59
HOXC4-201ENST00000303406 TFGQ92734 400 aaPredicted RBP18.74■□□□□ 0.59
HOXC4-201ENST00000303406 TIMM29Q9BSF4 260 aa18.74■□□□□ 0.59
HOXC4-201ENST00000303406 C1QTNF7Q9BXJ2 289 aa18.74■□□□□ 0.59
HOXC4-201ENST00000303406 UGT2B28Q9BY64 529 aa18.74■□□□□ 0.59
HOXC4-201ENST00000303406 TRPV5Q9NQA5 729 aa18.74■□□□□ 0.59
HOXC4-201ENST00000303406 GEMIN8Q9NWZ8 242 aaKnown RBP18.74■□□□□ 0.59
HOXC4-201ENST00000303406 ZFR2Q9UPR6 939 aaKnown RBP18.74■□□□□ 0.59
HOXC4-201ENST00000303406 PCYT1BQ9Y5K3 369 aaPredicted RBP18.74■□□□□ 0.59
HOXC4-201ENST00000303406 GMEB1Q9Y692 573 aa18.74■□□□□ 0.59
HOXC4-201ENST00000303406 PIPSLA2A3N6 862 aa18.74■□□□□ 0.59
HOXC4-201ENST00000303406 PCNAP12004 261 aa18.74■□□□□ 0.59
HOXC4-201ENST00000303406 MYCLP1P12525 358 aaPredicted RBP18.74■□□□□ 0.59
HOXC4-201ENST00000303406 TIA1P31483 386 aaKnown RBP eCLIP18.74■□□□□ 0.59
HOXC4-201ENST00000303406 TIE1P35590 1138 aa18.74■□□□□ 0.59
HOXC4-201ENST00000303406 SOX9P48436 509 aa18.74■□□□□ 0.59
HOXC4-201ENST00000303406 RAE1P78406 368 aaKnown RBP18.74■□□□□ 0.59
HOXC4-201ENST00000303406 DDX39BQ13838 428 aaKnown RBP18.74■□□□□ 0.59
HOXC4-201ENST00000303406 CYP2A13Q16696 494 aa18.74■□□□□ 0.59
HOXC4-201ENST00000303406 PGS1Q32NB8 556 aa18.74■□□□□ 0.59
HOXC4-201ENST00000303406 TMEM259Q4ZIN3 620 aa18.74■□□□□ 0.59
HOXC4-201ENST00000303406 TMTC4Q5T4D3 741 aa18.74■□□□□ 0.59
HOXC4-201ENST00000303406 DOK6Q6PKX4 331 aa18.74■□□□□ 0.59
HOXC4-201ENST00000303406 GALNT4Q8N4A0 578 aa18.74■□□□□ 0.59
HOXC4-201ENST00000303406 RNF175Q8N4F7 328 aa18.74■□□□□ 0.59
HOXC4-201ENST00000303406 PHC3Q8NDX5 983 aa18.74■□□□□ 0.59
HOXC4-201ENST00000303406 OR10A6Q8NH74 314 aa18.74■□□□□ 0.59
HOXC4-201ENST00000303406 PCBD2Q9H0N5 130 aa18.74■□□□□ 0.59
HOXC4-201ENST00000303406 PELI2Q9HAT8 420 aa18.74■□□□□ 0.59
HOXC4-201ENST00000303406 MBNL1Q9NR56 388 aaKnown RBP18.74■□□□□ 0.59
HOXC4-201ENST00000303406 OLAHQ9NV23 265 aa18.74■□□□□ 0.59
HOXC4-201ENST00000303406 SLC23A2Q9UGH3 650 aa18.74■□□□□ 0.59
HOXC4-201ENST00000303406 SERGEFQ9UGK8 458 aa18.74■□□□□ 0.59
HOXC4-201ENST00000303406 CIDEBQ9UHD4 219 aa18.74■□□□□ 0.59
HOXC4-201ENST00000303406 ADGRE2Q9UHX3 823 aa18.74■□□□□ 0.59
HOXC4-201ENST00000303406 USP22Q9UPT9 525 aa18.74■□□□□ 0.59
HOXC4-201ENST00000303406 INVSQ9Y283 1065 aa18.74■□□□□ 0.59
HOXC4-201ENST00000303406 TICRRQ7Z2Z1 1910 aa18.73■□□□□ 0.59
HOXC4-201ENST00000303406 DPPA5A6NC42 116 aa18.73■□□□□ 0.59
HOXC4-201ENST00000303406 RFXANKO14593 260 aa18.73■□□□□ 0.59
HOXC4-201ENST00000303406 SCAMP2O15127 329 aaKnown RBP18.73■□□□□ 0.59
HOXC4-201ENST00000303406 GSTA4O15217 222 aa18.73■□□□□ 0.59
HOXC4-201ENST00000303406 SCN2BO60939 215 aa18.73■□□□□ 0.59
HOXC4-201ENST00000303406 ETHE1O95571 254 aa18.73■□□□□ 0.59
HOXC4-201ENST00000303406 RETP07949 1114 aa18.73■□□□□ 0.59
HOXC4-201ENST00000303406 RAP2AP10114 183 aa18.73■□□□□ 0.59
HOXC4-201ENST00000303406 WNT3P56703 355 aa18.73■□□□□ 0.59
HOXC4-201ENST00000303406 RPS13P62277 151 aaKnown RBP18.73■□□□□ 0.59
HOXC4-201ENST00000303406 TXNL4AP83876 142 aaKnown RBP18.73■□□□□ 0.59
HOXC4-201ENST00000303406 FAM98BQ52LJ0 330 aaKnown RBP18.73■□□□□ 0.59
HOXC4-201ENST00000303406 CATSPEREQ5SY80 951 aa18.73■□□□□ 0.59
HOXC4-201ENST00000303406 CAPRIN2Q6IMN6 1127 aaKnown RBP18.73■□□□□ 0.59
HOXC4-201ENST00000303406 ST13P4Q8IZP2 240 aaPredicted RBP18.73■□□□□ 0.59
HOXC4-201ENST00000303406 C1orf52Q8N6N3 182 aaKnown RBP18.73■□□□□ 0.59
HOXC4-201ENST00000303406 REXO5Q96IC2 774 aaKnown RBP18.73■□□□□ 0.59
HOXC4-201ENST00000303406 EGLN2Q96KS0 407 aa18.73■□□□□ 0.59
HOXC4-201ENST00000303406 LGR4Q9BXB1 951 aa18.73■□□□□ 0.59
HOXC4-201ENST00000303406 EBPLQ9BY08 206 aa18.73■□□□□ 0.59
HOXC4-201ENST00000303406 PITHD1Q9GZP4 211 aaPredicted RBP18.73■□□□□ 0.59
HOXC4-201ENST00000303406 REXO4Q9GZR2 422 aaKnown RBP18.73■□□□□ 0.59
HOXC4-201ENST00000303406 IKZF5Q9H5V7 419 aa18.73■□□□□ 0.59
HOXC4-201ENST00000303406 PREBQ9HCU5 417 aa18.73■□□□□ 0.59
HOXC4-201ENST00000303406 DMRT3Q9NQL9 472 aa18.73■□□□□ 0.59
HOXC4-201ENST00000303406 BTNL2Q9UIR0 455 aa18.73■□□□□ 0.59
HOXC4-201ENST00000303406 C7orf72A4D263 438 aa18.72■□□□□ 0.59
HOXC4-201ENST00000303406 LDLRP01130 860 aa18.72■□□□□ 0.59
HOXC4-201ENST00000303406 DNTTP04053 509 aa18.72■□□□□ 0.59
HOXC4-201ENST00000303406 COX7A2P14406 83 aa18.72■□□□□ 0.59
HOXC4-201ENST00000303406 HPCAL1P37235 193 aa18.72■□□□□ 0.59
HOXC4-201ENST00000303406 RPL3P39023 403 aaKnown RBP18.72■□□□□ 0.59
HOXC4-201ENST00000303406 PLIN5Q00G26 463 aa18.72■□□□□ 0.59
HOXC4-201ENST00000303406 CTBSQ01459 385 aa18.72■□□□□ 0.59
HOXC4-201ENST00000303406 SGCGQ13326 291 aa18.72■□□□□ 0.59
HOXC4-201ENST00000303406 FGL2Q14314 439 aa18.72■□□□□ 0.59
HOXC4-201ENST00000303406 TMEM196Q5HYL7 178 aa18.72■□□□□ 0.59
HOXC4-201ENST00000303406 ANXA8L1Q5VT79 327 aa18.72■□□□□ 0.59
HOXC4-201ENST00000303406 OR4F3Q6IEY1 312 aa18.72■□□□□ 0.59
HOXC4-201ENST00000303406 SERPINA11Q86U17 422 aa18.72■□□□□ 0.59
HOXC4-201ENST00000303406 CHERPQ8IWX8 916 aaKnown RBP18.72■□□□□ 0.59
HOXC4-201ENST00000303406 KRT78Q8N1N4 520 aa18.72■□□□□ 0.59
HOXC4-201ENST00000303406 OR5AR1Q8NGP9 310 aa18.72■□□□□ 0.59
HOXC4-201ENST00000303406 FAM110BQ8TC76 370 aa18.72■□□□□ 0.59
HOXC4-201ENST00000303406 COQ8BQ96D53 544 aa18.72■□□□□ 0.59
HOXC4-201ENST00000303406 FAM120BQ96EK7 910 aaKnown RBP18.72■□□□□ 0.59
HOXC4-201ENST00000303406 MSLNLQ96KJ4 702 aa18.72■□□□□ 0.59
HOXC4-201ENST00000303406 PHF12Q96QT6 1004 aa18.72■□□□□ 0.59
HOXC4-201ENST00000303406 PRPF18Q99633 342 aaKnown RBP18.72■□□□□ 0.59
HOXC4-201ENST00000303406 SLC29A1Q99808 456 aa18.72■□□□□ 0.59
HOXC4-201ENST00000303406 CIB1Q99828 191 aa18.72■□□□□ 0.59
HOXC4-201ENST00000303406 INPP5KQ9BT40 448 aa18.72■□□□□ 0.59
HOXC4-201ENST00000303406 TRIT1Q9H3H1 467 aaKnown RBP18.72■□□□□ 0.59
HOXC4-201ENST00000303406 FBXL12Q9NXK8 326 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms