RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 DNAJB8Q8NHS0 232 aa10.14□□□□□ -0.79
CLIP1-201ENST00000302528 JOSD2Q8TAC2 188 aa10.14□□□□□ -0.79
CLIP1-201ENST00000302528 WACQ9BTA9 647 aa10.14□□□□□ -0.79
CLIP1-201ENST00000302528 A0A1B0GVT2 93 aa10.14□□□□□ -0.79
CLIP1-201ENST00000302528 A0A1W2PQ45 241 aaPredicted RBP10.14□□□□□ -0.79
CLIP1-201ENST00000302528 A0A1W2PQY0 241 aa10.14□□□□□ -0.79
CLIP1-201ENST00000302528 OR4Q2P0C623 313 aa10.14□□□□□ -0.79
CLIP1-201ENST00000302528 GNB3P16520 340 aa10.14□□□□□ -0.79
CLIP1-201ENST00000302528 ACTR1BP42025 376 aa10.14□□□□□ -0.79
CLIP1-201ENST00000302528 ACTR1AP61163 376 aa10.14□□□□□ -0.79
CLIP1-201ENST00000302528 TUBA1BP68363 451 aa10.14□□□□□ -0.79
CLIP1-201ENST00000302528 NFKB2Q00653 900 aa10.14□□□□□ -0.79
CLIP1-201ENST00000302528 PCBP2Q15366 365 aaKnown RBP eCLIP10.14□□□□□ -0.792e-8■■□□□ 11.9
CLIP1-201ENST00000302528 SYT16Q17RD7 645 aa10.14□□□□□ -0.79
CLIP1-201ENST00000302528 TUBA1AQ71U36 451 aa10.14□□□□□ -0.79
CLIP1-201ENST00000302528 LGI4Q8N135 537 aa10.14□□□□□ -0.79
CLIP1-201ENST00000302528 BORCS7Q96B45 105 aa10.14□□□□□ -0.79
CLIP1-201ENST00000302528 NUSAP1Q9BXS6 441 aaKnown RBP10.14□□□□□ -0.79
CLIP1-201ENST00000302528 EIF5A2Q9GZV4 153 aaKnown RBP10.14□□□□□ -0.79
CLIP1-201ENST00000302528 COQ10BQ9H8M1 238 aa10.14□□□□□ -0.79
CLIP1-201ENST00000302528 PLEKHA3Q9HB20 300 aa10.14□□□□□ -0.79
CLIP1-201ENST00000302528 DKKL1Q9UK85 242 aa10.14□□□□□ -0.79
CLIP1-201ENST00000302528 EDARQ9UNE0 448 aa10.14□□□□□ -0.79
CLIP1-201ENST00000302528 WASF2Q9Y6W5 498 aa10.14□□□□□ -0.79
CLIP1-201ENST00000302528 SPATA31A6Q5VVP1 1343 aa10.14□□□□□ -0.79
CLIP1-201ENST00000302528 BTNL10A8MVZ5 291 aa10.13□□□□□ -0.79
CLIP1-201ENST00000302528 MAP2K7O14733 419 aa10.13□□□□□ -0.79
CLIP1-201ENST00000302528 BRINP1O60477 761 aa10.13□□□□□ -0.79
CLIP1-201ENST00000302528 RP2O75695 350 aa10.13□□□□□ -0.79
CLIP1-201ENST00000302528 PIM1P11309 404 aaPredicted RBP10.13□□□□□ -0.79
CLIP1-201ENST00000302528 MAPK3P27361 379 aaPredicted RBP10.13□□□□□ -0.79
CLIP1-201ENST00000302528 DSTNP60981 165 aa10.13□□□□□ -0.79
CLIP1-201ENST00000302528 GNA12Q03113 381 aa10.13□□□□□ -0.79
CLIP1-201ENST00000302528 RPA4Q13156 261 aa10.13□□□□□ -0.79
CLIP1-201ENST00000302528 PLEKHN1Q494U1 663 aaPredicted RBP10.13□□□□□ -0.79
CLIP1-201ENST00000302528 ANKDD1AQ495B1 522 aa10.13□□□□□ -0.79
CLIP1-201ENST00000302528 GPR139Q6DWJ6 353 aa10.13□□□□□ -0.79
CLIP1-201ENST00000302528 LRRN1Q6UXK5 716 aa10.13□□□□□ -0.79
CLIP1-201ENST00000302528 AMZ2Q86W34 360 aa10.13□□□□□ -0.79
CLIP1-201ENST00000302528 FAM86B1Q8N7N1 296 aa10.13□□□□□ -0.79
CLIP1-201ENST00000302528 EZH1Q92800 747 aaPredicted RBP10.13□□□□□ -0.79
CLIP1-201ENST00000302528 C7orf34Q96L11 122 aa10.13□□□□□ -0.79
CLIP1-201ENST00000302528 PTTG2Q9NZH5 202 aa10.13□□□□□ -0.79
CLIP1-201ENST00000302528 B4DGG1 531 aa10.13□□□□□ -0.79
CLIP1-201ENST00000302528 B4GALT5O43286 388 aa10.13□□□□□ -0.79
CLIP1-201ENST00000302528 FKTNO75072 461 aa10.13□□□□□ -0.79
CLIP1-201ENST00000302528 ZNF8P17098 575 aaPredicted RBP10.13□□□□□ -0.79
CLIP1-201ENST00000302528 HOXB9P17482 250 aaPredicted RBP10.13□□□□□ -0.79
CLIP1-201ENST00000302528 DGKGP49619 791 aa10.13□□□□□ -0.79
CLIP1-201ENST00000302528 CCR8P51685 355 aa10.13□□□□□ -0.79
CLIP1-201ENST00000302528 SMSP52788 366 aa10.13□□□□□ -0.79
CLIP1-201ENST00000302528 HYAL2Q12891 473 aa10.13□□□□□ -0.79
CLIP1-201ENST00000302528 IRF5Q13568 498 aa10.13□□□□□ -0.79
CLIP1-201ENST00000302528 NPTX1Q15818 432 aa10.13□□□□□ -0.79
CLIP1-201ENST00000302528 CHRFAM7AQ494W8 412 aa10.13□□□□□ -0.79
CLIP1-201ENST00000302528 UBE2Q1Q7Z7E8 422 aa10.13□□□□□ -0.79
CLIP1-201ENST00000302528 HDAC2Q92769 488 aaKnown RBP10.13□□□□□ -0.79
CLIP1-201ENST00000302528 RAD9AQ99638 391 aa10.13□□□□□ -0.79
CLIP1-201ENST00000302528 GTPBP2Q9BX10 602 aaKnown RBP10.13□□□□□ -0.79
CLIP1-201ENST00000302528 OR2AG1Q9H205 316 aa10.13□□□□□ -0.79
CLIP1-201ENST00000302528 TAS2R3Q9NYW6 316 aa10.13□□□□□ -0.79
CLIP1-201ENST00000302528 PCDH10Q9P2E7 1040 aa10.13□□□□□ -0.79
CLIP1-201ENST00000302528 J3QRK9 145 aa10.13□□□□□ -0.79
CLIP1-201ENST00000302528 M0R2N6 131 aa10.13□□□□□ -0.79
CLIP1-201ENST00000302528 ESR1P03372 595 aa10.13□□□□□ -0.79
CLIP1-201ENST00000302528 CYP11A1P05108 521 aa10.13□□□□□ -0.79
CLIP1-201ENST00000302528 COL9A3Q14050 684 aaPredicted RBP10.13□□□□□ -0.79
CLIP1-201ENST00000302528 ELOAQ14241 798 aaKnown RBP10.13□□□□□ -0.79
CLIP1-201ENST00000302528 LRRC37A5PQ49AS3 106 aa10.13□□□□□ -0.79
CLIP1-201ENST00000302528 PLPPR4Q7Z2D5 763 aa10.13□□□□□ -0.79
CLIP1-201ENST00000302528 FAM156AQ8NDB6 213 aa10.13□□□□□ -0.79
CLIP1-201ENST00000302528 OR5M3Q8NGP4 307 aa10.13□□□□□ -0.79
CLIP1-201ENST00000302528 TMEM125Q96AQ2 219 aa10.13□□□□□ -0.79
CLIP1-201ENST00000302528 KCTD15Q96SI1 283 aaPredicted RBP10.13□□□□□ -0.79
CLIP1-201ENST00000302528 B3GNT5Q9BYG0 378 aa10.13□□□□□ -0.79
CLIP1-201ENST00000302528 FKBPLQ9UIM3 349 aa10.13□□□□□ -0.79
CLIP1-201ENST00000302528 COQ9O75208 318 aa10.13□□□□□ -0.79
CLIP1-201ENST00000302528 NSG1P42857 185 aa10.13□□□□□ -0.79
CLIP1-201ENST00000302528 CDH11P55287 796 aa10.13□□□□□ -0.79
CLIP1-201ENST00000302528 GAD2Q05329 585 aa10.13□□□□□ -0.79
CLIP1-201ENST00000302528 MRPL49Q13405 166 aaKnown RBP10.13□□□□□ -0.79
CLIP1-201ENST00000302528 TPRG1LQ5T0D9 272 aa10.13□□□□□ -0.79
CLIP1-201ENST00000302528 OR52E4Q8NGH9 312 aa10.13□□□□□ -0.79
CLIP1-201ENST00000302528 FN3KQ9H479 309 aa10.13□□□□□ -0.79
CLIP1-201ENST00000302528 GRHPRQ9UBQ7 328 aa10.13□□□□□ -0.79
CLIP1-201ENST00000302528 ZNF451Q9Y4E5 1061 aa10.13□□□□□ -0.79
CLIP1-201ENST00000302528 MAB21L2Q9Y586 359 aa10.13□□□□□ -0.79
CLIP1-201ENST00000302528 SNX10Q9Y5X0 201 aa10.13□□□□□ -0.79
CLIP1-201ENST00000302528 DPPA5A6NC42 116 aa10.13□□□□□ -0.79
CLIP1-201ENST00000302528 CLCA1A8K7I4 914 aa10.13□□□□□ -0.79
CLIP1-201ENST00000302528 HSBP1L1C9JCN9 74 aa10.13□□□□□ -0.79
CLIP1-201ENST00000302528 HHLA1C9JL84 531 aa10.13□□□□□ -0.79
CLIP1-201ENST00000302528 AP2A1O95782 977 aa10.13□□□□□ -0.79
CLIP1-201ENST00000302528 HLA-DPB1P04440 258 aa10.13□□□□□ -0.79
CLIP1-201ENST00000302528 UGT2B10P36537 528 aa10.13□□□□□ -0.79
CLIP1-201ENST00000302528 PTGER3P43115 390 aa10.13□□□□□ -0.79
CLIP1-201ENST00000302528 MAGEA8P43361 318 aa10.13□□□□□ -0.79
CLIP1-201ENST00000302528 SLC15A1P46059 708 aa10.13□□□□□ -0.79
CLIP1-201ENST00000302528 ZNF41P51814 821 aaPredicted RBP10.13□□□□□ -0.79
CLIP1-201ENST00000302528 MAP2K5Q13163 448 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms