RNA–Protein interactions for RNA: ENST00000297933.10

GAPVD1-202, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GAPVD1, Length 6,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-202ENST00000297933 ERVK-6Q9BXR3 956 aa6.74□□□□□ -1.33
GAPVD1-202ENST00000297933 TTYH1Q9H313 450 aaPredicted RBP6.74□□□□□ -1.33
GAPVD1-202ENST00000297933 FZD3Q9NPG1 666 aa6.74□□□□□ -1.33
GAPVD1-202ENST00000297933 ZFR2Q9UPR6 939 aaKnown RBP6.74□□□□□ -1.33
GAPVD1-202ENST00000297933 WASF2Q9Y6W5 498 aa6.74□□□□□ -1.33
GAPVD1-202ENST00000297933 UNC5CO95185 931 aa6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 APBB3O95704 486 aa6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 THEGLP0DJG4 465 aa6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 GALK1P51570 392 aa6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 CLRN1P58418 232 aa6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 NR0B2Q15466 257 aa6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 MORN1Q5T089 497 aa6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 SUSD1Q6UWL2 747 aa6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 ARL10Q8N8L6 244 aa6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 LRRN4CLQ8ND94 238 aa6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 OR5AK3PQ8NH89 298 aa6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 JPH3Q8WXH2 748 aaPredicted RBP6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 LPGAT1Q92604 370 aa6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 TEPSINQ96N21 525 aa6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 PLEKHG4BQ96PX9 1271 aa6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 FEM1AQ9BSK4 669 aa6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 RMI1Q9H9A7 625 aa6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 TCF7L1Q9HCS4 588 aa6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 ZDHHC7Q9NXF8 308 aa6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 PRODH2Q9UF12 536 aa6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 KNDC1Q76NI1 1749 aa6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 MON2Q7Z3U7 1717 aa6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 CIB4A0PJX0 185 aa6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 GRXCR1A8MXD5 290 aa6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 ZBTB11O95625 1053 aaPredicted RBP6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 RPS9P46781 194 aaKnown RBP6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 BCAP31P51572 246 aa6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 CBX3Q13185 183 aa6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 SIM2Q14190 667 aaPredicted RBP6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 ELAVL3Q14576 367 aaKnown RBP6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 TSC22D1Q15714 1073 aa6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 SLC9A4Q6AI14 798 aa6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 AAGABQ6PD74 315 aa6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 AGTRAPQ6RW13 159 aa6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 NANOGNBQ7Z5D8 188 aa6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 ASPGQ86U10 573 aa6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 AMIGO3Q86WK7 504 aa6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 C7orf57Q8NEG2 295 aa6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 KCNJ9Q92806 393 aa6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 C1orf74Q96LT6 269 aa6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 WDR77Q9BQA1 342 aaPredicted RBP6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 XKR8Q9H6D3 395 aa6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 SLCO1B3Q9NPD5 702 aa6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 RHBDL2Q9NX52 303 aa6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 SCML1Q9UN30 329 aa6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 PDCD5O14737 125 aa6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 PMM2O15305 246 aa6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 TM4SF4P48230 202 aa6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 TRAP1Q12931 704 aaKnown RBP6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 DLG1Q12959 904 aa6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 Q6ZVL8 140 aa6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 ADGRD2Q7Z7M1 963 aa6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 ZNF384Q8TF68 577 aa6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 COL21A1Q96P44 957 aa6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 HHIPQ96QV1 700 aa6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 MVB12BQ9H7P6 319 aa6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 BRD7Q9NPI1 651 aa6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 PLCL2Q9UPR0 1127 aa6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 MAN2B2Q9Y2E5 1009 aa6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 SNED1Q8TER0 1413 aa6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 ANKRD26Q9UPS8 1709 aa6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 NID2Q14112 1375 aa6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 NPIPA2E9PIF3 369 aa6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 NPIPA3F8WFD2 350 aa6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 EDF1O60869 148 aaKnown RBP6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 CDC123O75794 336 aaPredicted RBP6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 ERCC1P07992 297 aaPredicted RBP6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 TACSTD2P09758 323 aa6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 EPCAMP16422 314 aa6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 PFKLP17858 780 aa6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 MAP3K8P41279 467 aa6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 MTTPP55157 894 aa6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 RPS13P62277 151 aaKnown RBP6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 ID2Q02363 134 aa6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 KCNC3Q14003 757 aa6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 DPYSQ14117 519 aa6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 GANABQ14697 944 aaKnown RBP6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 RAB39AQ14964 217 aa6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 PLEKHS1Q5SXH7 462 aa6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 VWA5B1Q5TIE3 1220 aa6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 QSOX2Q6ZRP7 698 aa6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 CNTD1Q8N815 330 aa6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 ZNF781Q8N8C0 355 aa6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 MGME1Q9BQP7 344 aa6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 KCNK13Q9HB14 408 aa6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 PNPLA3Q9NST1 481 aa6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 NLE1Q9NVX2 485 aaPredicted RBP6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 PCDHGB1Q9Y5G3 927 aa6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 PLK4O00444 970 aa6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 SLC30A4O14863 429 aa6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 FARS2O95363 451 aaKnown RBP6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 CER1O95813 267 aa6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 IMPDH1P20839 514 aa6.73□□□□□ -1.33
GAPVD1-202ENST00000297933 MATN1P21941 496 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms