RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 OR4E2Q8NGC2 313 aa22.03■■□□□ 1.12
SMARCB1-201ENST00000263121 SLC37A2Q8TED4 501 aa22.03■■□□□ 1.12
SMARCB1-201ENST00000263121 RCN3Q96D15 328 aa22.03■■□□□ 1.12
SMARCB1-201ENST00000263121 APIPQ96GX9 242 aa22.03■■□□□ 1.12
SMARCB1-201ENST00000263121 FCRL1Q96LA6 429 aa22.03■■□□□ 1.12
SMARCB1-201ENST00000263121 TEX37Q96LM6 180 aa22.03■■□□□ 1.12
SMARCB1-201ENST00000263121 SLC25A23Q9BV35 468 aa22.03■■□□□ 1.12
SMARCB1-201ENST00000263121 ACTL8Q9H568 366 aa22.03■■□□□ 1.12
SMARCB1-201ENST00000263121 SPHK1Q9NYA1 384 aa22.03■■□□□ 1.12
SMARCB1-201ENST00000263121 CPNE7Q9UBL6 633 aa22.03■■□□□ 1.12
SMARCB1-201ENST00000263121 VPS29Q9UBQ0 182 aa22.03■■□□□ 1.12
SMARCB1-201ENST00000263121 TMED5Q9Y3A6 229 aa22.03■■□□□ 1.12
SMARCB1-201ENST00000263121 VIPP01282 170 aa22.02■■□□□ 1.12
SMARCB1-201ENST00000263121 CHRM5P08912 532 aaPredicted RBP22.02■■□□□ 1.12
SMARCB1-201ENST00000263121 ACPPP15309 386 aa22.02■■□□□ 1.12
SMARCB1-201ENST00000263121 AMD1P17707 334 aa22.02■■□□□ 1.12
SMARCB1-201ENST00000263121 ITGAXP20702 1163 aa22.02■■□□□ 1.12
SMARCB1-201ENST00000263121 CSNK1EP49674 416 aaKnown RBP22.02■■□□□ 1.12
SMARCB1-201ENST00000263121 AFF3P51826 1226 aaKnown RBP22.02■■□□□ 1.12
SMARCB1-201ENST00000263121 UFM1P61960 85 aa22.02■■□□□ 1.12
SMARCB1-201ENST00000263121 SLC25A3Q00325 362 aa22.02■■□□□ 1.12
SMARCB1-201ENST00000263121 STX5Q13190 355 aa22.02■■□□□ 1.12
SMARCB1-201ENST00000263121 ELOCQ15369 112 aa22.02■■□□□ 1.12
SMARCB1-201ENST00000263121 ZNF423Q2M1K9 1284 aa22.02■■□□□ 1.12
SMARCB1-201ENST00000263121 TMIGD1Q6UXZ0 262 aa22.02■■□□□ 1.12
SMARCB1-201ENST00000263121 C1orf210Q8IVY1 113 aa22.02■■□□□ 1.12
SMARCB1-201ENST00000263121 SFTPA2Q8IWL1 248 aa22.02■■□□□ 1.12
SMARCB1-201ENST00000263121 ADGRF3Q8IZF5 1079 aa22.02■■□□□ 1.12
SMARCB1-201ENST00000263121 PROKR1Q8TCW9 393 aa22.02■■□□□ 1.12
SMARCB1-201ENST00000263121 METTL2AQ96IZ6 378 aaKnown RBP22.02■■□□□ 1.12
SMARCB1-201ENST00000263121 SLC45A3Q96JT2 553 aa22.02■■□□□ 1.12
SMARCB1-201ENST00000263121 RAB3IPQ96QF0 476 aaPredicted RBP22.02■■□□□ 1.12
SMARCB1-201ENST00000263121 AIF1LQ9BQI0 150 aa22.02■■□□□ 1.12
SMARCB1-201ENST00000263121 PITHD1Q9GZP4 211 aaPredicted RBP22.02■■□□□ 1.12
SMARCB1-201ENST00000263121 DMRT3Q9NQL9 472 aa22.02■■□□□ 1.12
SMARCB1-201ENST00000263121 ARHGEF17Q96PE2 2063 aaPredicted RBP22.02■■□□□ 1.12
SMARCB1-201ENST00000263121 IGKV1-8A0A0C4DH67 115 aa22.01■■□□□ 1.11
SMARCB1-201ENST00000263121 FBP2O00757 339 aa22.01■■□□□ 1.11
SMARCB1-201ENST00000263121 AIM2O14862 343 aa22.01■■□□□ 1.11
SMARCB1-201ENST00000263121 SLC22A3O75751 556 aa22.01■■□□□ 1.11
SMARCB1-201ENST00000263121 ETHE1O95571 254 aa22.01■■□□□ 1.11
SMARCB1-201ENST00000263121 CXCR2P25025 360 aa22.01■■□□□ 1.11
SMARCB1-201ENST00000263121 PIK3CBP42338 1070 aa22.01■■□□□ 1.11
SMARCB1-201ENST00000263121 ABATP80404 500 aa22.01■■□□□ 1.11
SMARCB1-201ENST00000263121 GPR18Q14330 331 aa22.01■■□□□ 1.11
SMARCB1-201ENST00000263121 TJAP1Q5JTD0 557 aa22.01■■□□□ 1.11
SMARCB1-201ENST00000263121 BLOC1S3Q6QNY0 202 aa22.01■■□□□ 1.11
SMARCB1-201ENST00000263121 FAM46DQ8NEK8 389 aa22.01■■□□□ 1.11
SMARCB1-201ENST00000263121 TSPEARQ8WU66 669 aa22.01■■□□□ 1.11
SMARCB1-201ENST00000263121 SRMSQ9H3Y6 488 aa22.01■■□□□ 1.11
SMARCB1-201ENST00000263121 NT5DC2Q9H857 520 aa22.01■■□□□ 1.11
SMARCB1-201ENST00000263121 SLC52A3Q9NQ40 469 aa22.01■■□□□ 1.11
SMARCB1-201ENST00000263121 PPT2Q9UMR5 302 aa22.01■■□□□ 1.11
SMARCB1-201ENST00000263121 H7BY64 318 aa22.01■■□□□ 1.11
SMARCB1-201ENST00000263121 NR5A2O00482 541 aa22.01■■□□□ 1.11
SMARCB1-201ENST00000263121 NUDT2P50583 147 aa22.01■■□□□ 1.11
SMARCB1-201ENST00000263121 RPS13P62277 151 aaKnown RBP22.01■■□□□ 1.11
SMARCB1-201ENST00000263121 CSNK1G2P78368 415 aa22.01■■□□□ 1.11
SMARCB1-201ENST00000263121 RCAN2Q14206 197 aa22.01■■□□□ 1.11
SMARCB1-201ENST00000263121 CACHD1Q5VU97 1274 aa22.01■■□□□ 1.11
SMARCB1-201ENST00000263121 PMS2CLQ68D20 193 aa22.01■■□□□ 1.11
SMARCB1-201ENST00000263121 C11orf74Q86VG3 221 aa22.01■■□□□ 1.11
SMARCB1-201ENST00000263121 LIX1Q8N485 282 aa22.01■■□□□ 1.11
SMARCB1-201ENST00000263121 OR2L3Q8NG85 312 aa22.01■■□□□ 1.11
SMARCB1-201ENST00000263121 ZDHHC1Q8WTX9 485 aa22.01■■□□□ 1.11
SMARCB1-201ENST00000263121 GAB3Q8WWW8 586 aa22.01■■□□□ 1.11
SMARCB1-201ENST00000263121 C11orf24Q96F05 449 aaPredicted RBP22.01■■□□□ 1.11
SMARCB1-201ENST00000263121 PRAP1Q96NZ9 151 aa22.01■■□□□ 1.11
SMARCB1-201ENST00000263121 RHBGQ9H310 441 aa22.01■■□□□ 1.11
SMARCB1-201ENST00000263121 EFCAB1Q9HAE3 211 aa22.01■■□□□ 1.11
SMARCB1-201ENST00000263121 SPASTQ9UBP0 616 aa22.01■■□□□ 1.11
SMARCB1-201ENST00000263121 DLGAP4Q9Y2H0 992 aa22.01■■□□□ 1.11
SMARCB1-201ENST00000263121 THADAQ6YHU6 1953 aa22.01■■□□□ 1.11
SMARCB1-201ENST00000263121 VCANP13611 3396 aa22■■□□□ 1.11
SMARCB1-201ENST00000263121 BTN3A3O00478 584 aa22■■□□□ 1.11
SMARCB1-201ENST00000263121 CCNDBP1O95273 360 aa22■■□□□ 1.11
SMARCB1-201ENST00000263121 BCKDHAP12694 445 aa22■■□□□ 1.11
SMARCB1-201ENST00000263121 CAPN3P20807 821 aa22■■□□□ 1.11
SMARCB1-201ENST00000263121 JAK1P23458 1154 aa22■■□□□ 1.11
SMARCB1-201ENST00000263121 IL12AP29459 219 aa22■■□□□ 1.11
SMARCB1-201ENST00000263121 CSTF1Q05048 431 aaKnown RBP22■■□□□ 1.11
SMARCB1-201ENST00000263121 REP15Q6BDI9 236 aa22■■□□□ 1.11
SMARCB1-201ENST00000263121 VN1R5Q7Z5H4 357 aa22■■□□□ 1.11
SMARCB1-201ENST00000263121 GKN2Q86XP6 184 aa22■■□□□ 1.11
SMARCB1-201ENST00000263121 TMEM105Q8N8V8 129 aa22■■□□□ 1.11
SMARCB1-201ENST00000263121 KYQ8NBH2 561 aa22■■□□□ 1.11
SMARCB1-201ENST00000263121 LMX1AQ8TE12 382 aa22■■□□□ 1.11
SMARCB1-201ENST00000263121 NPAS2Q99743 824 aa22■■□□□ 1.11
SMARCB1-201ENST00000263121 SLC6A20Q9NP91 592 aa22■■□□□ 1.11
SMARCB1-201ENST00000263121 MRPS30Q9NP92 439 aaKnown RBP22■■□□□ 1.11
SMARCB1-201ENST00000263121 FAM234BA2RU67 622 aa21.99■■□□□ 1.11
SMARCB1-201ENST00000263121 BBIP1A8MTZ0 92 aa21.99■■□□□ 1.11
SMARCB1-201ENST00000263121 C9JVG2 144 aa21.99■■□□□ 1.11
SMARCB1-201ENST00000263121 H0YHG0 523 aa21.99■■□□□ 1.11
SMARCB1-201ENST00000263121 NRP2O60462 931 aa21.99■■□□□ 1.11
SMARCB1-201ENST00000263121 PRPS2P11908 318 aa21.99■■□□□ 1.11
SMARCB1-201ENST00000263121 MAPK1P28482 360 aa21.99■■□□□ 1.11
SMARCB1-201ENST00000263121 C21orf59P57076 290 aa21.99■■□□□ 1.11
SMARCB1-201ENST00000263121 HNRNPKP61978 463 aaKnown RBP eCLIP21.99■■□□□ 1.114e-10■■■■□ 21
SMARCB1-201ENST00000263121 TBL3Q12788 808 aaKnown RBP21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms