RNA–Protein interactions for RNA: ENST00000243056.4

HOXC13-201, Transcript of homeobox C13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC13, Length 2,423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13-201ENST00000243056 PPP6CO00743 305 aa19.3■□□□□ 0.68
HOXC13-201ENST00000243056 UBFD1O14562 309 aaKnown RBP19.3■□□□□ 0.68
HOXC13-201ENST00000243056 ERCC2P18074 760 aa19.3■□□□□ 0.68
HOXC13-201ENST00000243056 TSPAN8P19075 237 aa19.3■□□□□ 0.68
HOXC13-201ENST00000243056 HMGCLP35914 325 aa19.3■□□□□ 0.68
HOXC13-201ENST00000243056 HYAL2Q12891 473 aa19.3■□□□□ 0.68
HOXC13-201ENST00000243056 SPATS1Q496A3 300 aa19.3■□□□□ 0.68
HOXC13-201ENST00000243056 SETMARQ53H47 684 aaPredicted RBP19.3■□□□□ 0.68
HOXC13-201ENST00000243056 TXNDC8Q6A555 127 aa19.3■□□□□ 0.68
HOXC13-201ENST00000243056 TYW3Q6IPR3 259 aaKnown RBP19.3■□□□□ 0.68
HOXC13-201ENST00000243056 TMC8Q8IU68 726 aa19.3■□□□□ 0.68
HOXC13-201ENST00000243056 CEP97Q8IW35 865 aa19.3■□□□□ 0.68
HOXC13-201ENST00000243056 MRPL43Q8N983 215 aaKnown RBP19.3■□□□□ 0.68
HOXC13-201ENST00000243056 OR52H1Q8NGJ2 320 aa19.3■□□□□ 0.68
HOXC13-201ENST00000243056 CELF6Q96J87 481 aaKnown RBP19.3■□□□□ 0.68
HOXC13-201ENST00000243056 RBM4BQ9BQ04 359 aaKnown RBP19.3■□□□□ 0.68
HOXC13-201ENST00000243056 RBM4Q9BWF3 364 aaKnown RBP19.3■□□□□ 0.68
HOXC13-201ENST00000243056 LOC100506127A0A0U1RQW1 187 aa19.29■□□□□ 0.68
HOXC13-201ENST00000243056 CCL16O15467 120 aa19.29■□□□□ 0.68
HOXC13-201ENST00000243056 IFNA16P05015 189 aa19.29■□□□□ 0.68
HOXC13-201ENST00000243056 ALPPP05187 535 aa19.29■□□□□ 0.68
HOXC13-201ENST00000243056 MYL9P24844 172 aa19.29■□□□□ 0.68
HOXC13-201ENST00000243056 CTSKP43235 329 aa19.29■□□□□ 0.68
HOXC13-201ENST00000243056 GPR85P60893 370 aa19.29■□□□□ 0.68
HOXC13-201ENST00000243056 GBX1Q14549 363 aa19.29■□□□□ 0.68
HOXC13-201ENST00000243056 PAGE3Q5JUK9 113 aa19.29■□□□□ 0.68
HOXC13-201ENST00000243056 TMEM135Q86UB9 458 aa19.29■□□□□ 0.68
HOXC13-201ENST00000243056 CIR1Q86X95 450 aaPredicted RBP19.29■□□□□ 0.68
HOXC13-201ENST00000243056 LILRB2Q8N423 598 aa19.29■□□□□ 0.68
HOXC13-201ENST00000243056 VANGL1Q8TAA9 524 aaPredicted RBP19.29■□□□□ 0.68
HOXC13-201ENST00000243056 ZNF578Q96N58 590 aaPredicted RBP19.29■□□□□ 0.68
HOXC13-201ENST00000243056 ADGRE2Q9UHX3 823 aa19.29■□□□□ 0.68
HOXC13-201ENST00000243056 TMEFF2Q9UIK5 374 aaPredicted RBP19.29■□□□□ 0.68
HOXC13-201ENST00000243056 HSPE1-MOB4S4R3N1 261 aa19.29■□□□□ 0.68
HOXC13-201ENST00000243056 SLC16A6O15403 523 aa19.29■□□□□ 0.68
HOXC13-201ENST00000243056 COCHO43405 550 aa19.29■□□□□ 0.68
HOXC13-201ENST00000243056 MITFO75030 526 aaPredicted RBP19.29■□□□□ 0.68
HOXC13-201ENST00000243056 F9P00740 461 aa19.29■□□□□ 0.68
HOXC13-201ENST00000243056 IRF1P10914 325 aa19.29■□□□□ 0.68
HOXC13-201ENST00000243056 HOXB1P14653 301 aaPredicted RBP19.29■□□□□ 0.68
HOXC13-201ENST00000243056 CCR1P32246 355 aa19.29■□□□□ 0.68
HOXC13-201ENST00000243056 PIK3CBP42338 1070 aa19.29■□□□□ 0.68
HOXC13-201ENST00000243056 TBX4P57082 545 aa19.29■□□□□ 0.68
HOXC13-201ENST00000243056 DNAJB13P59910 316 aa19.29■□□□□ 0.68
HOXC13-201ENST00000243056 TPI1P60174 286 aa19.29■□□□□ 0.68
HOXC13-201ENST00000243056 CYP4F8P98187 520 aa19.29■□□□□ 0.68
HOXC13-201ENST00000243056 NKG7Q16617 165 aa19.29■□□□□ 0.68
HOXC13-201ENST00000243056 LIPIQ6XZB0 460 aa19.29■□□□□ 0.68
HOXC13-201ENST00000243056 TCEAL8Q8IYN2 117 aa19.29■□□□□ 0.68
HOXC13-201ENST00000243056 MIER2Q8N344 545 aa19.29■□□□□ 0.68
HOXC13-201ENST00000243056 NCLNQ969V3 563 aa19.29■□□□□ 0.68
HOXC13-201ENST00000243056 PTERQ96BW5 349 aa19.29■□□□□ 0.68
HOXC13-201ENST00000243056 SLC30A2Q9BRI3 323 aa19.29■□□□□ 0.68
HOXC13-201ENST00000243056 RGS5O15539 181 aa19.28■□□□□ 0.68
HOXC13-201ENST00000243056 TULP3O75386 442 aa19.28■□□□□ 0.68
HOXC13-201ENST00000243056 C8AP07357 584 aa19.28■□□□□ 0.68
HOXC13-201ENST00000243056 EPCAMP16422 314 aa19.28■□□□□ 0.68
HOXC13-201ENST00000243056 HTR1EP28566 365 aa19.28■□□□□ 0.68
HOXC13-201ENST00000243056 PLK1P53350 603 aa19.28■□□□□ 0.68
HOXC13-201ENST00000243056 POLR2GP62487 172 aaKnown RBP eCLIP19.28■□□□□ 0.68
HOXC13-201ENST00000243056 RGS1Q08116 209 aa19.28■□□□□ 0.68
HOXC13-201ENST00000243056 GRB7Q14451 532 aa19.28■□□□□ 0.68
HOXC13-201ENST00000243056 AANATQ16613 207 aa19.28■□□□□ 0.68
HOXC13-201ENST00000243056 ARTNQ5T4W7 220 aa19.28■□□□□ 0.68
HOXC13-201ENST00000243056 SYVN1Q86TM6 617 aa19.28■□□□□ 0.68
HOXC13-201ENST00000243056 PROSER1Q86XN7 944 aa19.28■□□□□ 0.68
HOXC13-201ENST00000243056 KREMEN2Q8NCW0 462 aa19.28■□□□□ 0.68
HOXC13-201ENST00000243056 C19orf60Q96EN9 201 aa19.28■□□□□ 0.68
HOXC13-201ENST00000243056 TBATAQ96M53 351 aa19.28■□□□□ 0.68
HOXC13-201ENST00000243056 MRPL57Q9BQC6 102 aaKnown RBP19.28■□□□□ 0.68
HOXC13-201ENST00000243056 PBX4Q9BYU1 374 aa19.28■□□□□ 0.68
HOXC13-201ENST00000243056 MTIF3Q9H2K0 278 aaKnown RBP19.28■□□□□ 0.68
HOXC13-201ENST00000243056 PPA2Q9H2U2 334 aa19.28■□□□□ 0.68
HOXC13-201ENST00000243056 BFARQ9NZS9 450 aa19.28■□□□□ 0.68
HOXC13-201ENST00000243056 STOML2Q9UJZ1 356 aa19.28■□□□□ 0.68
HOXC13-201ENST00000243056 C3orf18Q9UK00 162 aa19.28■□□□□ 0.68
HOXC13-201ENST00000243056 ACOT9Q9Y305 439 aa19.28■□□□□ 0.68
HOXC13-201ENST00000243056 HS3ST4Q9Y661 456 aa19.28■□□□□ 0.68
HOXC13-201ENST00000243056 U3KQV3 271 aa19.28■□□□□ 0.68
HOXC13-201ENST00000243056 B4DXG7 233 aa19.27■□□□□ 0.68
HOXC13-201ENST00000243056 ZDHHC11BP0C7U3 371 aa19.27■□□□□ 0.68
HOXC13-201ENST00000243056 ATP5F1P24539 256 aaPredicted RBP19.27■□□□□ 0.68
HOXC13-201ENST00000243056 AZGP1P25311 298 aaKnown RBP19.27■□□□□ 0.68
HOXC13-201ENST00000243056 SLC12A2P55011 1212 aa19.27■□□□□ 0.68
HOXC13-201ENST00000243056 EEFSECP57772 596 aaKnown RBP19.27■□□□□ 0.68
HOXC13-201ENST00000243056 ZXDBP98169 803 aa19.27■□□□□ 0.68
HOXC13-201ENST00000243056 LILRA6Q6PI73 481 aa19.27■□□□□ 0.68
HOXC13-201ENST00000243056 ADGRD2Q7Z7M1 963 aa19.27■□□□□ 0.68
HOXC13-201ENST00000243056 MFSD6LQ8IWD5 586 aa19.27■□□□□ 0.68
HOXC13-201ENST00000243056 DTWD1Q8N5C7 304 aa19.27■□□□□ 0.68
HOXC13-201ENST00000243056 KCNS3Q9BQ31 491 aa19.27■□□□□ 0.68
HOXC13-201ENST00000243056 SPATA9Q9BWV2 254 aa19.27■□□□□ 0.68
HOXC13-201ENST00000243056 TTLL2Q9BWV7 592 aa19.27■□□□□ 0.68
HOXC13-201ENST00000243056 FAM83DQ9H4H8 585 aa19.27■□□□□ 0.68
HOXC13-201ENST00000243056 FANCFQ9NPI8 374 aa19.27■□□□□ 0.68
HOXC13-201ENST00000243056 SCN3BQ9NY72 215 aa19.27■□□□□ 0.68
HOXC13-201ENST00000243056 MRPL39Q9NYK5 338 aaKnown RBP19.27■□□□□ 0.68
HOXC13-201ENST00000243056 FNIP2Q9P278 1114 aa19.27■□□□□ 0.68
HOXC13-201ENST00000243056 KLHL21Q9UJP4 597 aa19.27■□□□□ 0.68
HOXC13-201ENST00000243056 ZNF175Q9Y473 711 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms