RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 OR51B5Q9H339 312 aa13.36□□□□□ -0.27
SIX4-201ENST00000216513 EIF2B3Q9NR50 452 aaKnown RBP13.36□□□□□ -0.27
SIX4-201ENST00000216513 ABCB10Q9NRK6 738 aa13.36□□□□□ -0.27
SIX4-201ENST00000216513 EHD3Q9NZN3 535 aa13.36□□□□□ -0.27
SIX4-201ENST00000216513 COL6A2P12110 1019 aa13.35□□□□□ -0.27
SIX4-201ENST00000216513 ARF5P84085 180 aa13.35□□□□□ -0.27
SIX4-201ENST00000216513 SPATA19Q7Z5L4 167 aa13.35□□□□□ -0.27
SIX4-201ENST00000216513 ZNF781Q8N8C0 355 aa13.35□□□□□ -0.27
SIX4-201ENST00000216513 CNDP2Q96KP4 475 aaKnown RBP13.35□□□□□ -0.27
SIX4-201ENST00000216513 GPER1Q99527 375 aa13.35□□□□□ -0.27
SIX4-201ENST00000216513 CIB1Q99828 191 aa13.35□□□□□ -0.27
SIX4-201ENST00000216513 ZCCHC3Q9NUD5 404 aaKnown RBP13.35□□□□□ -0.27
SIX4-201ENST00000216513 CPSF4LA6NMK7 179 aaKnown RBP13.35□□□□□ -0.27
SIX4-201ENST00000216513 MGRN1O60291 552 aa13.35□□□□□ -0.27
SIX4-201ENST00000216513 MFN2O95140 757 aa13.35□□□□□ -0.27
SIX4-201ENST00000216513 CBSLP0DN79 551 aa13.35□□□□□ -0.27
SIX4-201ENST00000216513 CBSP35520 551 aa13.35□□□□□ -0.27
SIX4-201ENST00000216513 NUP62P37198 522 aaPredicted RBP13.35□□□□□ -0.27
SIX4-201ENST00000216513 DHDDSQ86SQ9 333 aa13.35□□□□□ -0.27
SIX4-201ENST00000216513 CHERPQ8IWX8 916 aaKnown RBP13.35□□□□□ -0.27
SIX4-201ENST00000216513 ZNF671Q8TAW3 534 aa13.35□□□□□ -0.27
SIX4-201ENST00000216513 LRCH3Q96II8 777 aa13.35□□□□□ -0.27
SIX4-201ENST00000216513 TPK1Q9H3S4 243 aa13.35□□□□□ -0.27
SIX4-201ENST00000216513 IKZF3Q9UKT9 509 aa13.35□□□□□ -0.27
SIX4-201ENST00000216513 RUVBL1Q9Y265 456 aaKnown RBP13.35□□□□□ -0.27
SIX4-201ENST00000216513 A0A1B0GW55 424 aa13.35□□□□□ -0.27
SIX4-201ENST00000216513 DUX4L2P0CJ85 424 aa13.35□□□□□ -0.27
SIX4-201ENST00000216513 DUX4L3P0CJ86 424 aa13.35□□□□□ -0.27
SIX4-201ENST00000216513 DUX4L4P0CJ87 422 aa13.35□□□□□ -0.27
SIX4-201ENST00000216513 DUX4L5P0CJ88 424 aa13.35□□□□□ -0.27
SIX4-201ENST00000216513 DUX4L6P0CJ89 424 aa13.35□□□□□ -0.27
SIX4-201ENST00000216513 DUX4L7P0CJ90 424 aa13.35□□□□□ -0.27
SIX4-201ENST00000216513 NFE2L1Q14494 772 aa13.35□□□□□ -0.27
SIX4-201ENST00000216513 HTR3DQ70Z44 454 aa13.35□□□□□ -0.27
SIX4-201ENST00000216513 TRIM73Q86UV7 250 aa13.35□□□□□ -0.27
SIX4-201ENST00000216513 ADHFE1Q8IWW8 467 aa13.35□□□□□ -0.27
SIX4-201ENST00000216513 ULK2Q8IYT8 1036 aa13.35□□□□□ -0.27
SIX4-201ENST00000216513 PEBP4Q96S96 227 aa13.35□□□□□ -0.27
SIX4-201ENST00000216513 MARCH5Q9NX47 278 aa13.35□□□□□ -0.27
SIX4-201ENST00000216513 DUX4Q9UBX2 424 aa13.35□□□□□ -0.27
SIX4-201ENST00000216513 MYRFQ9Y2G1 1151 aa13.35□□□□□ -0.27
SIX4-201ENST00000216513 MAGEB3O15480 346 aa13.35□□□□□ -0.27
SIX4-201ENST00000216513 AP2A2O94973 939 aa13.35□□□□□ -0.27
SIX4-201ENST00000216513 ABHD2P08910 425 aa13.35□□□□□ -0.27
SIX4-201ENST00000216513 POLR2JP52435 117 aaKnown RBP13.35□□□□□ -0.27
SIX4-201ENST00000216513 PTP4A2Q12974 167 aa13.35□□□□□ -0.27
SIX4-201ENST00000216513 SEMA3AQ14563 771 aa13.35□□□□□ -0.27
SIX4-201ENST00000216513 DUOXA1Q1HG43 343 aa13.35□□□□□ -0.27
SIX4-201ENST00000216513 TMEM151BQ8IW70 566 aa13.35□□□□□ -0.27
SIX4-201ENST00000216513 SFRP1Q8N474 314 aa13.35□□□□□ -0.27
SIX4-201ENST00000216513 FAM47BQ8NA70 645 aa13.35□□□□□ -0.27
SIX4-201ENST00000216513 APOL4Q9BPW4 351 aa13.35□□□□□ -0.27
SIX4-201ENST00000216513 TRMOQ9BU70 441 aa13.35□□□□□ -0.27
SIX4-201ENST00000216513 ULBP3Q9BZM4 244 aa13.35□□□□□ -0.27
SIX4-201ENST00000216513 TRIM8Q9BZR9 551 aa13.35□□□□□ -0.27
SIX4-201ENST00000216513 VRTNQ9H8Y1 702 aa13.35□□□□□ -0.27
SIX4-201ENST00000216513 MAGEE1Q9HCI5 957 aa13.35□□□□□ -0.27
SIX4-201ENST00000216513 STRCP1A6NGW2 1772 aa13.35□□□□□ -0.27
SIX4-201ENST00000216513 hCG_2039718K7EN88 272 aa13.35□□□□□ -0.27
SIX4-201ENST00000216513 FCER2P06734 321 aa13.35□□□□□ -0.27
SIX4-201ENST00000216513 PROZP22891 400 aa13.35□□□□□ -0.27
SIX4-201ENST00000216513 PTX3P26022 381 aaPredicted RBP13.35□□□□□ -0.27
SIX4-201ENST00000216513 AK4P27144 223 aaPredicted RBP13.35□□□□□ -0.27
SIX4-201ENST00000216513 IL12RB1P42701 662 aa13.35□□□□□ -0.27
SIX4-201ENST00000216513 TMPRSS9Q7Z410 1059 aa13.35□□□□□ -0.27
SIX4-201ENST00000216513 OR2AJ1Q8NGZ0 328 aa13.35□□□□□ -0.27
SIX4-201ENST00000216513 DOK4Q8TEW6 326 aa13.35□□□□□ -0.27
SIX4-201ENST00000216513 CEP295NLQ96MC4 621 aa13.35□□□□□ -0.27
SIX4-201ENST00000216513 MRPS26Q9BYN8 205 aaKnown RBP13.35□□□□□ -0.27
SIX4-201ENST00000216513 FAM117AQ9C073 453 aa13.35□□□□□ -0.27
SIX4-201ENST00000216513 ABCB9Q9NP78 766 aa13.35□□□□□ -0.27
SIX4-201ENST00000216513 CALML5Q9NZT1 146 aa13.35□□□□□ -0.27
SIX4-201ENST00000216513 RGSL1A5PLK6 1076 aa13.34□□□□□ -0.27
SIX4-201ENST00000216513 OR1I1O60431 355 aa13.34□□□□□ -0.27
SIX4-201ENST00000216513 P04436 131 aa13.34□□□□□ -0.27
SIX4-201ENST00000216513 MED22Q15528 200 aa13.34□□□□□ -0.27
SIX4-201ENST00000216513 DEFB134Q4QY38 66 aa13.34□□□□□ -0.27
SIX4-201ENST00000216513 MYADMQ96S97 322 aa13.34□□□□□ -0.27
SIX4-201ENST00000216513 GIN1Q9NXP7 522 aa13.34□□□□□ -0.27
SIX4-201ENST00000216513 FKBP6O75344 327 aa13.34□□□□□ -0.27
SIX4-201ENST00000216513 AP1S2P56377 157 aa13.34□□□□□ -0.27
SIX4-201ENST00000216513 TUBB3Q13509 450 aa13.34□□□□□ -0.27
SIX4-201ENST00000216513 TRIQKQ629K1 86 aa13.34□□□□□ -0.27
SIX4-201ENST00000216513 NEK5Q6P3R8 708 aa13.34□□□□□ -0.27
SIX4-201ENST00000216513 OR5AK3PQ8NH89 298 aa13.34□□□□□ -0.27
SIX4-201ENST00000216513 PSKH2Q96QS6 385 aa13.34□□□□□ -0.27
SIX4-201ENST00000216513 CRISPLD1Q9H336 500 aa13.34□□□□□ -0.27
SIX4-201ENST00000216513 DNAAF2Q9NVR5 837 aaKnown RBP13.34□□□□□ -0.27
SIX4-201ENST00000216513 RAPGEFL1Q9UHV5 662 aa13.34□□□□□ -0.27
SIX4-201ENST00000216513 GMPPBQ9Y5P6 360 aa13.34□□□□□ -0.27
SIX4-201ENST00000216513 A0A1W2PRB8 838 aa13.34□□□□□ -0.27
SIX4-201ENST00000216513 CDC14CA4D256 554 aa13.34□□□□□ -0.27
SIX4-201ENST00000216513 CTHP32929 405 aa13.34□□□□□ -0.27
SIX4-201ENST00000216513 NOVA1P51513 510 aaKnown RBP13.34□□□□□ -0.27
SIX4-201ENST00000216513 NNATQ16517 81 aa13.34□□□□□ -0.27
SIX4-201ENST00000216513 FBXW8Q8N3Y1 598 aa13.34□□□□□ -0.27
SIX4-201ENST00000216513 DCAKDQ8WVC6 231 aa13.34□□□□□ -0.27
SIX4-201ENST00000216513 PGM2Q96G03 612 aa13.34□□□□□ -0.27
SIX4-201ENST00000216513 TMEM74Q96NL1 305 aa13.34□□□□□ -0.27
SIX4-201ENST00000216513 COPS4Q9BT78 406 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms