RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 UGT8Q16880 541 aa7.99□□□□□ -1.13
VAMP3-201ENST00000054666 LRRK1Q38SD2 2015 aa7.99□□□□□ -1.13
VAMP3-201ENST00000054666 TMEM52BQ4KMG9 183 aa7.99□□□□□ -1.13
VAMP3-201ENST00000054666 THEMIS2Q5TEJ8 643 aa7.99□□□□□ -1.13
VAMP3-201ENST00000054666 ERICH5Q6P6B1 374 aa7.99□□□□□ -1.13
VAMP3-201ENST00000054666 UBE2Q1Q7Z7E8 422 aa7.99□□□□□ -1.13
VAMP3-201ENST00000054666 PATL1Q86TB9 770 aaKnown RBP7.99□□□□□ -1.13
VAMP3-201ENST00000054666 SERPINA11Q86U17 422 aa7.99□□□□□ -1.13
VAMP3-201ENST00000054666 STK32CQ86UX6 486 aa7.99□□□□□ -1.13
VAMP3-201ENST00000054666 CALHM3Q86XJ0 350 aa7.99□□□□□ -1.13
VAMP3-201ENST00000054666 ADHFE1Q8IWW8 467 aa7.99□□□□□ -1.13
VAMP3-201ENST00000054666 C1orf52Q8N6N3 182 aaKnown RBP7.99□□□□□ -1.13
VAMP3-201ENST00000054666 METTL25Q8N6Q8 603 aa7.99□□□□□ -1.13
VAMP3-201ENST00000054666 OR7G3Q8NG95 312 aa7.99□□□□□ -1.13
VAMP3-201ENST00000054666 OR7A2PQ8NGA2 310 aa7.99□□□□□ -1.13
VAMP3-201ENST00000054666 OR8J2Q8NGG1 315 aa7.99□□□□□ -1.13
VAMP3-201ENST00000054666 OR9A1PQ8NGU1 263 aa7.99□□□□□ -1.13
VAMP3-201ENST00000054666 HUS1BQ8NHY5 278 aa7.99□□□□□ -1.13
VAMP3-201ENST00000054666 ZNF480Q8WV37 535 aa7.99□□□□□ -1.13
VAMP3-201ENST00000054666 NEIL2Q969S2 332 aa7.99□□□□□ -1.13
VAMP3-201ENST00000054666 FBXL20Q96IG2 436 aa7.99□□□□□ -1.13
VAMP3-201ENST00000054666 LINC00615Q96LM1 132 aaPredicted RBP7.99□□□□□ -1.13
VAMP3-201ENST00000054666 RDH12Q96NR8 316 aa7.99□□□□□ -1.13
VAMP3-201ENST00000054666 TMEM245Q9H330 911 aa7.99□□□□□ -1.13
VAMP3-201ENST00000054666 DPEP2Q9H4A9 486 aa7.99□□□□□ -1.13
VAMP3-201ENST00000054666 CCDC177Q9NQR7 707 aaPredicted RBP7.99□□□□□ -1.13
VAMP3-201ENST00000054666 SLC6A13Q9NSD5 602 aa7.99□□□□□ -1.13
VAMP3-201ENST00000054666 DCAF13Q9NV06 445 aaKnown RBP7.99□□□□□ -1.13
VAMP3-201ENST00000054666 TUBA8Q9NY65 449 aaPredicted RBP7.99□□□□□ -1.13
VAMP3-201ENST00000054666 ATXN10Q9UBB4 475 aa7.99□□□□□ -1.13
VAMP3-201ENST00000054666 GPR34Q9UPC5 381 aa7.99□□□□□ -1.13
VAMP3-201ENST00000054666 CORO2BQ9UQ03 480 aa7.99□□□□□ -1.13
VAMP3-201ENST00000054666 C2orf16Q68DN1 1984 aa7.99□□□□□ -1.13
VAMP3-201ENST00000054666 KIAA1549LQ6ZVL6 1849 aa7.99□□□□□ -1.13
VAMP3-201ENST00000054666 G3V2T6 193 aa7.98□□□□□ -1.13
VAMP3-201ENST00000054666 H0YAE9 185 aa7.98□□□□□ -1.13
VAMP3-201ENST00000054666 NPC1O15118 1278 aa7.98□□□□□ -1.13
VAMP3-201ENST00000054666 PCDH7O60245 1069 aa7.98□□□□□ -1.13
VAMP3-201ENST00000054666 LILRB5O75023 590 aa7.98□□□□□ -1.13
VAMP3-201ENST00000054666 PRSS23O95084 383 aa7.98□□□□□ -1.13
VAMP3-201ENST00000054666 CCNDBP1O95273 360 aa7.98□□□□□ -1.13
VAMP3-201ENST00000054666 CPSF4O95639 269 aaKnown RBP7.98□□□□□ -1.13
VAMP3-201ENST00000054666 GNAO1P09471 354 aa7.98□□□□□ -1.13
VAMP3-201ENST00000054666 ANXA4P09525 319 aaPredicted RBP7.98□□□□□ -1.13
VAMP3-201ENST00000054666 THRBP10828 461 aa7.98□□□□□ -1.13
VAMP3-201ENST00000054666 MYCLP1P12525 358 aaPredicted RBP7.98□□□□□ -1.13
VAMP3-201ENST00000054666 HOXB9P17482 250 aaPredicted RBP7.98□□□□□ -1.13
VAMP3-201ENST00000054666 IL1RNP18510 177 aa7.98□□□□□ -1.13
VAMP3-201ENST00000054666 PPIBP23284 216 aaKnown RBP7.98□□□□□ -1.13
VAMP3-201ENST00000054666 TIA1P31483 386 aaKnown RBP eCLIP7.98□□□□□ -1.131e-7■□□□□ 10.3
VAMP3-201ENST00000054666 LBX1P52954 281 aa7.98□□□□□ -1.13
VAMP3-201ENST00000054666 TPD52P55327 224 aaPredicted RBP7.98□□□□□ -1.13
VAMP3-201ENST00000054666 ERVK-21P61565 698 aa7.98□□□□□ -1.13
VAMP3-201ENST00000054666 ESRRGP62508 458 aa7.98□□□□□ -1.13
VAMP3-201ENST00000054666 VAC14Q08AM6 782 aa7.98□□□□□ -1.13
VAMP3-201ENST00000054666 LRRC74AQ0VAA2 488 aa7.98□□□□□ -1.13
VAMP3-201ENST00000054666 LAPTM5Q13571 262 aa7.98□□□□□ -1.13
VAMP3-201ENST00000054666 SLBPQ14493 270 aaKnown RBP eCLIP7.98□□□□□ -1.13
VAMP3-201ENST00000054666 PON2Q15165 354 aa7.98□□□□□ -1.13
VAMP3-201ENST00000054666 GAB4Q2WGN9 574 aa7.98□□□□□ -1.13
VAMP3-201ENST00000054666 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.98□□□□□ -1.13
VAMP3-201ENST00000054666 LRRC23Q53EV4 343 aaPredicted RBP7.98□□□□□ -1.13
VAMP3-201ENST00000054666 ANXA8L1Q5VT79 327 aa7.98□□□□□ -1.13
VAMP3-201ENST00000054666 BORAQ6PGQ7 559 aa7.98□□□□□ -1.13
VAMP3-201ENST00000054666 UNC5DQ6UXZ4 953 aa7.98□□□□□ -1.13
VAMP3-201ENST00000054666 SLCO4C1Q6ZQN7 724 aa7.98□□□□□ -1.13
VAMP3-201ENST00000054666 ZNF621Q6ZSS3 439 aa7.98□□□□□ -1.13
VAMP3-201ENST00000054666 NUDT18Q6ZVK8 323 aa7.98□□□□□ -1.13
VAMP3-201ENST00000054666 ZCCHC7Q8N3Z6 543 aaKnown RBP7.98□□□□□ -1.13
VAMP3-201ENST00000054666 FAM86B1Q8N7N1 296 aa7.98□□□□□ -1.13
VAMP3-201ENST00000054666 GPR156Q8NFN8 814 aa7.98□□□□□ -1.13
VAMP3-201ENST00000054666 SPDYE1Q8NFV5 336 aaPredicted RBP7.98□□□□□ -1.13
VAMP3-201ENST00000054666 OR2L2Q8NH16 312 aa7.98□□□□□ -1.13
VAMP3-201ENST00000054666 ZFAND2BQ8WV99 257 aa7.98□□□□□ -1.13
VAMP3-201ENST00000054666 SLC5A11Q8WWX8 675 aa7.98□□□□□ -1.13
VAMP3-201ENST00000054666 NCSTNQ92542 709 aa7.98□□□□□ -1.13
VAMP3-201ENST00000054666 UBE2E3Q969T4 207 aa7.98□□□□□ -1.13
VAMP3-201ENST00000054666 HIC2Q96JB3 615 aa7.98□□□□□ -1.13
VAMP3-201ENST00000054666 HHIPQ96QV1 700 aa7.98□□□□□ -1.13
VAMP3-201ENST00000054666 DUSP26Q9BV47 211 aa7.98□□□□□ -1.13
VAMP3-201ENST00000054666 HDAC8Q9BY41 377 aa7.98□□□□□ -1.13
VAMP3-201ENST00000054666 PTTG2Q9NZH5 202 aa7.98□□□□□ -1.13
VAMP3-201ENST00000054666 LAMA2P24043 3122 aaKnown RBP7.98□□□□□ -1.13
VAMP3-201ENST00000054666 OTOL1A6NHN0 477 aaPredicted RBP7.98□□□□□ -1.13
VAMP3-201ENST00000054666 GRXCR1A8MXD5 290 aa7.98□□□□□ -1.13
VAMP3-201ENST00000054666 CLIC1O00299 241 aa7.98□□□□□ -1.13
VAMP3-201ENST00000054666 POP7O75817 140 aaKnown RBP7.98□□□□□ -1.13
VAMP3-201ENST00000054666 SNAP29O95721 258 aa7.98□□□□□ -1.13
VAMP3-201ENST00000054666 RPN2P04844 631 aa7.98□□□□□ -1.13
VAMP3-201ENST00000054666 ETS2P15036 469 aa7.98□□□□□ -1.13
VAMP3-201ENST00000054666 ZNF8P17098 575 aaPredicted RBP7.98□□□□□ -1.13
VAMP3-201ENST00000054666 PTPN6P29350 595 aa7.98□□□□□ -1.13
VAMP3-201ENST00000054666 P2RY2P41231 377 aa7.98□□□□□ -1.13
VAMP3-201ENST00000054666 IL12RB1P42701 662 aa7.98□□□□□ -1.13
VAMP3-201ENST00000054666 RPS13P62277 151 aaKnown RBP7.98□□□□□ -1.13
VAMP3-201ENST00000054666 ZNF763Q0D2J5 394 aa7.98□□□□□ -1.13
VAMP3-201ENST00000054666 HKDC1Q2TB90 917 aa7.98□□□□□ -1.13
VAMP3-201ENST00000054666 ZNF658BQ4V348 819 aaPredicted RBP7.98□□□□□ -1.13
VAMP3-201ENST00000054666 CYBRD1Q53TN4 286 aa7.98□□□□□ -1.13
VAMP3-201ENST00000054666 CPTPQ5TA50 214 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms