RNA–Protein interactions for RNA: ENST00000628516.1

LINC00628-201, long intergenic non-protein coding RNA 628, humanhuman

BASIC

Gene LINC00628, Length 1,289 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00628-201ENST00000628516 MMP11P24347 488 aa15.71■□□□□ 0.11
LINC00628-201ENST00000628516 CMPK1P30085 196 aa15.71■□□□□ 0.11
LINC00628-201ENST00000628516 YBX1P67809 324 aaKnown RBP15.71■□□□□ 0.11
LINC00628-201ENST00000628516 CTBP1Q13363 440 aa15.71■□□□□ 0.11
LINC00628-201ENST00000628516 TSTA3Q13630 321 aaPredicted RBP15.71■□□□□ 0.11
LINC00628-201ENST00000628516 TRADDQ15628 312 aa15.71■□□□□ 0.11
LINC00628-201ENST00000628516 NKG7Q16617 165 aa15.71■□□□□ 0.11
LINC00628-201ENST00000628516 HIF1AQ16665 826 aa15.71■□□□□ 0.11
LINC00628-201ENST00000628516 PRR30Q53SZ7 412 aaPredicted RBP15.71■□□□□ 0.11
LINC00628-201ENST00000628516 HP1BP3Q5SSJ5 553 aaPredicted RBP15.71■□□□□ 0.11
LINC00628-201ENST00000628516 SUSD1Q6UWL2 747 aa15.71■□□□□ 0.11
LINC00628-201ENST00000628516 COX15Q7KZN9 410 aa15.71■□□□□ 0.11
LINC00628-201ENST00000628516 DENND6AQ8IWF6 608 aa15.71■□□□□ 0.11
LINC00628-201ENST00000628516 PDIK1LQ8N165 341 aa15.71■□□□□ 0.11
LINC00628-201ENST00000628516 SPSB2Q99619 263 aa15.71■□□□□ 0.11
LINC00628-201ENST00000628516 CCDC68Q9H2F9 335 aa15.71■□□□□ 0.11
LINC00628-201ENST00000628516 SOX17Q9H6I2 414 aaPredicted RBP15.71■□□□□ 0.11
LINC00628-201ENST00000628516 ZNF552Q9H707 407 aaPredicted RBP15.71■□□□□ 0.11
LINC00628-201ENST00000628516 WDR54Q9H977 334 aa15.71■□□□□ 0.11
LINC00628-201ENST00000628516 ATP13A2Q9NQ11 1180 aa15.71■□□□□ 0.11
LINC00628-201ENST00000628516 FBXO6Q9NRD1 293 aaPredicted RBP15.71■□□□□ 0.11
LINC00628-201ENST00000628516 ENAMQ9NRM1 1142 aa15.71■□□□□ 0.11
LINC00628-201ENST00000628516 MAU2Q9Y6X3 613 aa15.71■□□□□ 0.11
LINC00628-201ENST00000628516 LOC105369274A0A096LPK9 316 aa15.7■□□□□ 0.1
LINC00628-201ENST00000628516 LOC102723532A0A0G2JNH3 316 aa15.7■□□□□ 0.1
LINC00628-201ENST00000628516 HYKKA2RU49 373 aa15.7■□□□□ 0.1
LINC00628-201ENST00000628516 CATP04040 527 aaKnown RBP15.7■□□□□ 0.1
LINC00628-201ENST00000628516 ERGP11308 486 aa15.7■□□□□ 0.1
LINC00628-201ENST00000628516 RPA3P35244 121 aaPredicted RBP15.7■□□□□ 0.1
LINC00628-201ENST00000628516 CLCN7P51798 805 aa15.7■□□□□ 0.1
LINC00628-201ENST00000628516 GUCY2DQ02846 1103 aa15.7■□□□□ 0.1
LINC00628-201ENST00000628516 NAA25Q14CX7 972 aa15.7■□□□□ 0.1
LINC00628-201ENST00000628516 TTLL9Q3SXZ7 439 aa15.7■□□□□ 0.1
LINC00628-201ENST00000628516 SHISA6Q6ZSJ9 500 aa15.7■□□□□ 0.1
LINC00628-201ENST00000628516 RNF44Q7L0R7 432 aa15.7■□□□□ 0.1
LINC00628-201ENST00000628516 OR4N4Q8N0Y3 316 aa15.7■□□□□ 0.1
LINC00628-201ENST00000628516 DTWD1Q8N5C7 304 aa15.7■□□□□ 0.1
LINC00628-201ENST00000628516 LRRN4CLQ8ND94 238 aa15.7■□□□□ 0.1
LINC00628-201ENST00000628516 SMPDL3AQ92484 453 aa15.7■□□□□ 0.1
LINC00628-201ENST00000628516 NACC2Q96BF6 587 aa15.7■□□□□ 0.1
LINC00628-201ENST00000628516 PKP4Q99569 1192 aa15.7■□□□□ 0.1
LINC00628-201ENST00000628516 SLC30A3Q99726 388 aa15.7■□□□□ 0.1
LINC00628-201ENST00000628516 ZFYVE21Q9BQ24 234 aa15.7■□□□□ 0.1
LINC00628-201ENST00000628516 DPH7Q9BTV6 452 aa15.7■□□□□ 0.1
LINC00628-201ENST00000628516 SLC26A1Q9H2B4 701 aa15.7■□□□□ 0.1
LINC00628-201ENST00000628516 MRPS30Q9NP92 439 aaKnown RBP15.7■□□□□ 0.1
LINC00628-201ENST00000628516 FAM114A2Q9NRY5 505 aa15.7■□□□□ 0.1
LINC00628-201ENST00000628516 CTSFQ9UBX1 484 aa15.7■□□□□ 0.1
LINC00628-201ENST00000628516 NXT1Q9UKK6 140 aaKnown RBP15.7■□□□□ 0.1
LINC00628-201ENST00000628516 ZCWPW2A0A1B0GU75 182 aa15.69■□□□□ 0.1
LINC00628-201ENST00000628516 OR2A25A4D2G3 310 aa15.69■□□□□ 0.1
LINC00628-201ENST00000628516 MYO1CO00159 1063 aa15.69■□□□□ 0.1
LINC00628-201ENST00000628516 IPO13O94829 963 aaKnown RBP15.69■□□□□ 0.1
LINC00628-201ENST00000628516 MED26O95402 600 aa15.69■□□□□ 0.1
LINC00628-201ENST00000628516 ERVK-10P10266 1014 aa15.69■□□□□ 0.1
LINC00628-201ENST00000628516 PGAM1P18669 254 aa15.69■□□□□ 0.1
LINC00628-201ENST00000628516 ITGA3P26006 1051 aa15.69■□□□□ 0.1
LINC00628-201ENST00000628516 PNLIPRP1P54315 467 aa15.69■□□□□ 0.1
LINC00628-201ENST00000628516 PLTPP55058 493 aa15.69■□□□□ 0.1
LINC00628-201ENST00000628516 SOX8P57073 446 aa15.69■□□□□ 0.1
LINC00628-201ENST00000628516 AIMP2Q13155 320 aaKnown RBP15.69■□□□□ 0.1
LINC00628-201ENST00000628516 CUL1Q13616 776 aa15.69■□□□□ 0.1
LINC00628-201ENST00000628516 ARHGAP19Q14CB8 494 aa15.69■□□□□ 0.1
LINC00628-201ENST00000628516 PLEKHN1Q494U1 663 aaPredicted RBP15.69■□□□□ 0.1
LINC00628-201ENST00000628516 FHL5Q5TD97 284 aa15.69■□□□□ 0.1
LINC00628-201ENST00000628516 FBXO42Q6P3S6 717 aa15.69■□□□□ 0.1
LINC00628-201ENST00000628516 NEK10Q6ZWH5 1172 aa15.69■□□□□ 0.1
LINC00628-201ENST00000628516 IGDCC3Q8IVU1 814 aa15.69■□□□□ 0.1
LINC00628-201ENST00000628516 EBNA1BP2Q99848 306 aaKnown RBP15.69■□□□□ 0.1
LINC00628-201ENST00000628516 L2HGDHQ9H9P8 463 aa15.69■□□□□ 0.1
LINC00628-201ENST00000628516 ZNF304Q9HCX3 659 aa15.69■□□□□ 0.1
LINC00628-201ENST00000628516 SLC6A20Q9NP91 592 aa15.69■□□□□ 0.1
LINC00628-201ENST00000628516 C20orf96Q9NUD7 363 aaPredicted RBP15.69■□□□□ 0.1
LINC00628-201ENST00000628516 STOX2Q9P2F5 926 aaPredicted RBP15.69■□□□□ 0.1
LINC00628-201ENST00000628516 TAC3Q9UHF0 121 aa15.69■□□□□ 0.1
LINC00628-201ENST00000628516 DMGDHQ9UI17 866 aaKnown RBP15.69■□□□□ 0.1
LINC00628-201ENST00000628516 FBXL4Q9UKA2 621 aa15.69■□□□□ 0.1
LINC00628-201ENST00000628516 CHMP2BQ9UQN3 213 aa15.69■□□□□ 0.1
LINC00628-201ENST00000628516 NBPF19A0A087WUL8 3843 aa15.68■□□□□ 0.1
LINC00628-201ENST00000628516 USP9XQ93008 2570 aaPredicted RBP15.68■□□□□ 0.1
LINC00628-201ENST00000628516 ZNF839A8K0R7 811 aa15.68■□□□□ 0.1
LINC00628-201ENST00000628516 SOCS6O14544 535 aa15.68■□□□□ 0.1
LINC00628-201ENST00000628516 ALOX12BO75342 701 aa15.68■□□□□ 0.1
LINC00628-201ENST00000628516 VPS26AO75436 327 aa15.68■□□□□ 0.1
LINC00628-201ENST00000628516 SYF2O95926 243 aaKnown RBP15.68■□□□□ 0.1
LINC00628-201ENST00000628516 VARSP26640 1264 aaKnown RBP15.68■□□□□ 0.1
LINC00628-201ENST00000628516 HSD17B2P37059 387 aa15.68■□□□□ 0.1
LINC00628-201ENST00000628516 ELK3P41970 407 aa15.68■□□□□ 0.1
LINC00628-201ENST00000628516 SLC1A2P43004 574 aa15.68■□□□□ 0.1
LINC00628-201ENST00000628516 PDIA2Q13087 525 aaKnown RBP15.68■□□□□ 0.1
LINC00628-201ENST00000628516 RBBP7Q16576 425 aa15.68■□□□□ 0.1
LINC00628-201ENST00000628516 LONRF1Q17RB8 773 aa15.68■□□□□ 0.1
LINC00628-201ENST00000628516 MUM1Q2TAK8 710 aa15.68■□□□□ 0.1
LINC00628-201ENST00000628516 GLE1Q53GS7 698 aaKnown RBP15.68■□□□□ 0.1
LINC00628-201ENST00000628516 PRMT9Q6P2P2 845 aa15.68■□□□□ 0.1
LINC00628-201ENST00000628516 ZNF549Q6P9A3 640 aa15.68■□□□□ 0.1
LINC00628-201ENST00000628516 ZDHHC24Q6UX98 284 aa15.68■□□□□ 0.1
LINC00628-201ENST00000628516 IGFL3Q6UXB1 125 aa15.68■□□□□ 0.1
LINC00628-201ENST00000628516 SPNS2Q8IVW8 549 aa15.68■□□□□ 0.1
LINC00628-201ENST00000628516 PPFIBP2Q8ND30 876 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms