RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 PCDH1Q08174 1060 aa17.17■□□□□ 0.34
PTCHD3-202ENST00000622555 SF1Q15637 639 aaKnown RBP17.17■□□□□ 0.34
PTCHD3-202ENST00000622555 CPSF6Q16630 551 aaKnown RBP eCLIP17.17■□□□□ 0.34
PTCHD3-202ENST00000622555 GGTA1PQ4G0N0 100 aa17.17■□□□□ 0.34
PTCHD3-202ENST00000622555 LIPJQ5W064 366 aa17.17■□□□□ 0.34
PTCHD3-202ENST00000622555 ATG9BQ674R7 924 aa17.17■□□□□ 0.34
PTCHD3-202ENST00000622555 ARMC6Q6NXE6 501 aa17.17■□□□□ 0.34
PTCHD3-202ENST00000622555 NXPE4Q6UWF7 544 aa17.17■□□□□ 0.34
PTCHD3-202ENST00000622555 CCT6BQ92526 530 aa17.17■□□□□ 0.34
PTCHD3-202ENST00000622555 RSC1A1Q92681 617 aa17.17■□□□□ 0.34
PTCHD3-202ENST00000622555 PTCD3Q96EY7 689 aaKnown RBP17.17■□□□□ 0.34
PTCHD3-202ENST00000622555 APOLD1Q96LR9 279 aa17.17■□□□□ 0.34
PTCHD3-202ENST00000622555 MAGEB10Q96LZ2 347 aaPredicted RBP17.17■□□□□ 0.34
PTCHD3-202ENST00000622555 MRPS30Q9NP92 439 aaKnown RBP17.17■□□□□ 0.34
PTCHD3-202ENST00000622555 CUEDC1Q9NWM3 386 aaPredicted RBP17.17■□□□□ 0.34
PTCHD3-202ENST00000622555 ACTR10Q9NZ32 417 aa17.17■□□□□ 0.34
PTCHD3-202ENST00000622555 OR5K3A6NET4 321 aa17.16■□□□□ 0.34
PTCHD3-202ENST00000622555 CCT8L1PA6NM43 557 aa17.16■□□□□ 0.34
PTCHD3-202ENST00000622555 C2orf74A8MZ97 194 aa17.16■□□□□ 0.34
PTCHD3-202ENST00000622555 HGSO14964 777 aaPredicted RBP17.16■□□□□ 0.34
PTCHD3-202ENST00000622555 ZNF883P0CG24 379 aa17.16■□□□□ 0.34
PTCHD3-202ENST00000622555 C1GALT1C1LP0DN25 315 aa17.16■□□□□ 0.34
PTCHD3-202ENST00000622555 JUPP14923 745 aa17.16■□□□□ 0.34
PTCHD3-202ENST00000622555 GLB1P16278 677 aa17.16■□□□□ 0.34
PTCHD3-202ENST00000622555 CD22P20273 847 aa17.16■□□□□ 0.34
PTCHD3-202ENST00000622555 CMPK1P30085 196 aa17.16■□□□□ 0.34
PTCHD3-202ENST00000622555 SPEM2Q0P670 501 aa17.16■□□□□ 0.34
PTCHD3-202ENST00000622555 SUZ12Q15022 739 aaKnown RBP17.16■□□□□ 0.34
PTCHD3-202ENST00000622555 NR0B2Q15466 257 aa17.16■□□□□ 0.34
PTCHD3-202ENST00000622555 TBCCQ15814 346 aa17.16■□□□□ 0.34
PTCHD3-202ENST00000622555 UGT3A2Q3SY77 523 aa17.16■□□□□ 0.34
PTCHD3-202ENST00000622555 TCHHL1Q5QJ38 904 aaPredicted RBP17.16■□□□□ 0.34
PTCHD3-202ENST00000622555 KLHL35Q6PF15 583 aa17.16■□□□□ 0.34
PTCHD3-202ENST00000622555 MAVSQ7Z434 540 aa17.16■□□□□ 0.34
PTCHD3-202ENST00000622555 FAM20CQ8IXL6 584 aa17.16■□□□□ 0.34
PTCHD3-202ENST00000622555 OR2L3Q8NG85 312 aa17.16■□□□□ 0.34
PTCHD3-202ENST00000622555 TWIST2Q8WVJ9 160 aa17.16■□□□□ 0.34
PTCHD3-202ENST00000622555 PRR11Q96HE9 360 aaPredicted RBP17.16■□□□□ 0.34
PTCHD3-202ENST00000622555 SIKE1Q9BRV8 207 aa17.16■□□□□ 0.34
PTCHD3-202ENST00000622555 SLC29A3Q9BZD2 475 aa17.16■□□□□ 0.34
PTCHD3-202ENST00000622555 NUF2Q9BZD4 464 aa17.16■□□□□ 0.34
PTCHD3-202ENST00000622555 EHD1Q9H4M9 534 aa17.16■□□□□ 0.34
PTCHD3-202ENST00000622555 KCNK4Q9NYG8 393 aa17.16■□□□□ 0.34
PTCHD3-202ENST00000622555 NCDNQ9UBB6 729 aa17.16■□□□□ 0.34
PTCHD3-202ENST00000622555 ENTPD2Q9Y5L3 495 aa17.16■□□□□ 0.34
PTCHD3-202ENST00000622555 DNAJC15Q9Y5T4 150 aa17.16■□□□□ 0.34
PTCHD3-202ENST00000622555 RP1P56715 2156 aa17.16■□□□□ 0.34
PTCHD3-202ENST00000622555 MUC6Q6W4X9 2439 aa17.16■□□□□ 0.34
PTCHD3-202ENST00000622555 KCNE1BA0A087WTH5 132 aa17.16■□□□□ 0.34
PTCHD3-202ENST00000622555 PROS1P07225 676 aa17.16■□□□□ 0.34
PTCHD3-202ENST00000622555 UGT2B7P16662 529 aa17.16■□□□□ 0.34
PTCHD3-202ENST00000622555 ALDH4A1P30038 563 aa17.16■□□□□ 0.34
PTCHD3-202ENST00000622555 HNF4AP41235 474 aa17.16■□□□□ 0.34
PTCHD3-202ENST00000622555 CASP2P42575 452 aa17.16■□□□□ 0.34
PTCHD3-202ENST00000622555 ABATP80404 500 aa17.16■□□□□ 0.34
PTCHD3-202ENST00000622555 GRHL2Q6ISB3 625 aa17.16■□□□□ 0.34
PTCHD3-202ENST00000622555 EFL1Q7Z2Z2 1120 aaKnown RBP17.16■□□□□ 0.34
PTCHD3-202ENST00000622555 ANKS4BQ8N8V4 417 aa17.16■□□□□ 0.34
PTCHD3-202ENST00000622555 FAM181AQ8N9Y4 354 aa17.16■□□□□ 0.34
PTCHD3-202ENST00000622555 WDR34Q96EX3 536 aa17.16■□□□□ 0.34
PTCHD3-202ENST00000622555 PPP1R36Q96LQ0 422 aa17.16■□□□□ 0.34
PTCHD3-202ENST00000622555 OR2A14Q96R47 310 aa17.16■□□□□ 0.34
PTCHD3-202ENST00000622555 EFCAB11Q9BUY7 163 aa17.16■□□□□ 0.34
PTCHD3-202ENST00000622555 TWSG1Q9GZX9 223 aa17.16■□□□□ 0.34
PTCHD3-202ENST00000622555 PELI2Q9HAT8 420 aa17.16■□□□□ 0.34
PTCHD3-202ENST00000622555 DNAAF2Q9NVR5 837 aaKnown RBP17.16■□□□□ 0.34
PTCHD3-202ENST00000622555 BTRCQ9Y297 605 aa17.16■□□□□ 0.34
PTCHD3-202ENST00000622555 ASXL3Q9C0F0 2248 aa17.15■□□□□ 0.34
PTCHD3-202ENST00000622555 TRPC5OSA6NMA1 111 aa17.15■□□□□ 0.34
PTCHD3-202ENST00000622555 H7BY64 318 aa17.15■□□□□ 0.34
PTCHD3-202ENST00000622555 ZNF195O14628 629 aa17.15■□□□□ 0.34
PTCHD3-202ENST00000622555 SLC34A2O95436 690 aa17.15■□□□□ 0.34
PTCHD3-202ENST00000622555 JUNP05412 331 aaKnown RBP17.15■□□□□ 0.34
PTCHD3-202ENST00000622555 ALOX15P16050 662 aaPredicted RBP17.15■□□□□ 0.34
PTCHD3-202ENST00000622555 NBL1P41271 181 aa17.15■□□□□ 0.34
PTCHD3-202ENST00000622555 CCR8P51685 355 aa17.15■□□□□ 0.34
PTCHD3-202ENST00000622555 EPHA4P54764 986 aa17.15■□□□□ 0.34
PTCHD3-202ENST00000622555 MEF2AQ02078 507 aaPredicted RBP17.15■□□□□ 0.34
PTCHD3-202ENST00000622555 BTKQ06187 659 aa17.15■□□□□ 0.34
PTCHD3-202ENST00000622555 SLBPQ14493 270 aaKnown RBP eCLIP17.15■□□□□ 0.34
PTCHD3-202ENST00000622555 ZRSR2Q15696 482 aaKnown RBP17.15■□□□□ 0.34
PTCHD3-202ENST00000622555 PAGE2BQ5JRK9 111 aa17.15■□□□□ 0.34
PTCHD3-202ENST00000622555 VWA5B1Q5TIE3 1220 aa17.15■□□□□ 0.34
PTCHD3-202ENST00000622555 ZNF438Q7Z4V0 828 aa17.15■□□□□ 0.34
PTCHD3-202ENST00000622555 ADCK2Q7Z695 626 aa17.15■□□□□ 0.34
PTCHD3-202ENST00000622555 DDIASQ8IXT1 998 aa17.15■□□□□ 0.34
PTCHD3-202ENST00000622555 ABHD11Q8NFV4 315 aa17.15■□□□□ 0.34
PTCHD3-202ENST00000622555 FLVCR1-AS1Q8TAF5 88 aa17.15■□□□□ 0.34
PTCHD3-202ENST00000622555 PRAP1Q96NZ9 151 aa17.15■□□□□ 0.34
PTCHD3-202ENST00000622555 TMEM120AQ9BXJ8 343 aa17.15■□□□□ 0.34
PTCHD3-202ENST00000622555 KCNK13Q9HB14 408 aa17.15■□□□□ 0.34
PTCHD3-202ENST00000622555 GEMIN8Q9NWZ8 242 aaKnown RBP17.15■□□□□ 0.34
PTCHD3-202ENST00000622555 SNX6Q9UNH7 406 aa17.15■□□□□ 0.34
PTCHD3-202ENST00000622555 LY6G6EA0A0G2JKS1 128 aa17.14■□□□□ 0.33
PTCHD3-202ENST00000622555 MANBAO00462 879 aa17.14■□□□□ 0.33
PTCHD3-202ENST00000622555 DIAPH2O60879 1101 aa17.14■□□□□ 0.33
PTCHD3-202ENST00000622555 KRT6AP02538 564 aa17.14■□□□□ 0.33
PTCHD3-202ENST00000622555 LMNAP02545 664 aaKnown RBP17.14■□□□□ 0.33
PTCHD3-202ENST00000622555 KRT6BP04259 564 aa17.14■□□□□ 0.33
PTCHD3-202ENST00000622555 CAPZBP47756 277 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms