RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 SLC19A1P41440 591 aa19■□□□□ 0.63
PDLIM3-212ENST00000620787 CSNK2BP67870 215 aa19■□□□□ 0.63
PDLIM3-212ENST00000620787 TIGD6Q17RP2 521 aa19■□□□□ 0.63
PDLIM3-212ENST00000620787 IQCCQ4KMZ1 466 aa19■□□□□ 0.63
PDLIM3-212ENST00000620787 PARP16Q8N5Y8 322 aa19■□□□□ 0.63
PDLIM3-212ENST00000620787 SELENOMQ8WWX9 145 aa19■□□□□ 0.63
PDLIM3-212ENST00000620787 MIR1-1HGQ9H1L0 117 aa19■□□□□ 0.63
PDLIM3-212ENST00000620787 TPK1Q9H3S4 243 aa19■□□□□ 0.63
PDLIM3-212ENST00000620787 LHX3Q9UBR4 397 aa19■□□□□ 0.63
PDLIM3-212ENST00000620787 CLIC1O00299 241 aa19■□□□□ 0.63
PDLIM3-212ENST00000620787 DUSP11O75319 330 aaKnown RBP19■□□□□ 0.63
PDLIM3-212ENST00000620787 AKR1A1P14550 325 aa19■□□□□ 0.63
PDLIM3-212ENST00000620787 ENGP17813 658 aa19■□□□□ 0.63
PDLIM3-212ENST00000620787 SLC11A2P49281 568 aa19■□□□□ 0.63
PDLIM3-212ENST00000620787 NEK2P51955 445 aa19■□□□□ 0.63
PDLIM3-212ENST00000620787 PRKCDQ05655 676 aa19■□□□□ 0.63
PDLIM3-212ENST00000620787 ELP6Q0PNE2 266 aa19■□□□□ 0.63
PDLIM3-212ENST00000620787 ARHGEF7Q14155 803 aa19■□□□□ 0.63
PDLIM3-212ENST00000620787 CLLU1OSQ5K130 101 aa19■□□□□ 0.63
PDLIM3-212ENST00000620787 RNF219Q5W0B1 726 aaPredicted RBP19■□□□□ 0.63
PDLIM3-212ENST00000620787 Q6ZPB1 254 aaPredicted RBP19■□□□□ 0.63
PDLIM3-212ENST00000620787 MSANTD1Q6ZTZ1 278 aa19■□□□□ 0.63
PDLIM3-212ENST00000620787 GPR155Q7Z3F1 870 aa19■□□□□ 0.63
PDLIM3-212ENST00000620787 SLC46A3Q7Z3Q1 461 aa19■□□□□ 0.63
PDLIM3-212ENST00000620787 DENND1CQ8IV53 801 aa19■□□□□ 0.63
PDLIM3-212ENST00000620787 METTL4Q8N3J2 472 aa19■□□□□ 0.63
PDLIM3-212ENST00000620787 CHAC2Q8WUX2 184 aa19■□□□□ 0.63
PDLIM3-212ENST00000620787 SPATA17Q96L03 361 aa19■□□□□ 0.63
PDLIM3-212ENST00000620787 KCNE1BA0A087WTH5 132 aa18.99■□□□□ 0.63
PDLIM3-212ENST00000620787 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.99■□□□□ 0.63
PDLIM3-212ENST00000620787 MTMR11A4FU01 709 aa18.99■□□□□ 0.63
PDLIM3-212ENST00000620787 VIPP01282 170 aa18.99■□□□□ 0.63
PDLIM3-212ENST00000620787 C9P02748 559 aa18.99■□□□□ 0.63
PDLIM3-212ENST00000620787 MAGP20916 626 aa18.99■□□□□ 0.63
PDLIM3-212ENST00000620787 ZNF45Q02386 682 aa18.99■□□□□ 0.63
PDLIM3-212ENST00000620787 ZNF177Q13360 481 aaPredicted RBP18.99■□□□□ 0.63
PDLIM3-212ENST00000620787 NDUFA5Q16718 116 aa18.99■□□□□ 0.63
PDLIM3-212ENST00000620787 GLB1LQ6UWU2 654 aa18.99■□□□□ 0.63
PDLIM3-212ENST00000620787 SAPCD2Q86UD0 394 aa18.99■□□□□ 0.63
PDLIM3-212ENST00000620787 P3H2Q8IVL5 708 aa18.99■□□□□ 0.63
PDLIM3-212ENST00000620787 CLIP4Q8N3C7 705 aa18.99■□□□□ 0.63
PDLIM3-212ENST00000620787 AMER2Q8N7J2 671 aa18.99■□□□□ 0.63
PDLIM3-212ENST00000620787 TRPV1Q8NER1 839 aa18.99■□□□□ 0.63
PDLIM3-212ENST00000620787 APIPQ96GX9 242 aa18.99■□□□□ 0.63
PDLIM3-212ENST00000620787 ZNF486Q96H40 463 aaPredicted RBP18.99■□□□□ 0.63
PDLIM3-212ENST00000620787 ASB8Q9H765 288 aa18.99■□□□□ 0.63
PDLIM3-212ENST00000620787 MOV10Q9HCE1 1003 aaKnown RBP18.99■□□□□ 0.63
PDLIM3-212ENST00000620787 QPCTLQ9NXS2 382 aa18.99■□□□□ 0.63
PDLIM3-212ENST00000620787 CCDC59Q9P031 241 aaKnown RBP18.99■□□□□ 0.63
PDLIM3-212ENST00000620787 FKBP9O95302 570 aa18.99■□□□□ 0.63
PDLIM3-212ENST00000620787 IGHA2P01877 340 aa18.99■□□□□ 0.63
PDLIM3-212ENST00000620787 GPX2P18283 190 aa18.99■□□□□ 0.63
PDLIM3-212ENST00000620787 PRPH2P23942 346 aa18.99■□□□□ 0.63
PDLIM3-212ENST00000620787 MTAPQ13126 283 aa18.99■□□□□ 0.63
PDLIM3-212ENST00000620787 DUOXA1Q1HG43 343 aa18.99■□□□□ 0.63
PDLIM3-212ENST00000620787 PDE12Q6L8Q7 609 aaKnown RBP18.99■□□□□ 0.63
PDLIM3-212ENST00000620787 C16orf59Q7L2K0 433 aa18.99■□□□□ 0.63
PDLIM3-212ENST00000620787 FAM9CQ8IZT9 166 aa18.99■□□□□ 0.63
PDLIM3-212ENST00000620787 CMTM7Q96FZ5 175 aa18.99■□□□□ 0.63
PDLIM3-212ENST00000620787 YME1L1Q96TA2 773 aa18.99■□□□□ 0.63
PDLIM3-212ENST00000620787 DPH2Q9BQC3 489 aaPredicted RBP18.99■□□□□ 0.63
PDLIM3-212ENST00000620787 ABCG8Q9H221 673 aa18.99■□□□□ 0.63
PDLIM3-212ENST00000620787 PLCXD1Q9NUJ7 323 aa18.99■□□□□ 0.63
PDLIM3-212ENST00000620787 FKBP14Q9NWM8 211 aa18.99■□□□□ 0.63
PDLIM3-212ENST00000620787 DNMT3LQ9UJW3 386 aa18.99■□□□□ 0.63
PDLIM3-212ENST00000620787 FPGTO14772 594 aa18.98■□□□□ 0.63
PDLIM3-212ENST00000620787 HAT1O14929 419 aa18.98■□□□□ 0.63
PDLIM3-212ENST00000620787 KIR3DL1P43629 444 aa18.98■□□□□ 0.63
PDLIM3-212ENST00000620787 TRPC1P48995 793 aa18.98■□□□□ 0.63
PDLIM3-212ENST00000620787 NFATC2Q13469 925 aa18.98■□□□□ 0.63
PDLIM3-212ENST00000620787 MRPL58Q14197 206 aaKnown RBP18.98■□□□□ 0.63
PDLIM3-212ENST00000620787 C6orf183Q5T699 404 aa18.98■□□□□ 0.63
PDLIM3-212ENST00000620787 CXorf57Q6NSI4 855 aaKnown RBP18.98■□□□□ 0.63
PDLIM3-212ENST00000620787 GPR153Q6NV75 609 aa18.98■□□□□ 0.63
PDLIM3-212ENST00000620787 ERICH5Q6P6B1 374 aa18.98■□□□□ 0.63
PDLIM3-212ENST00000620787 SYTL1Q8IYJ3 562 aa18.98■□□□□ 0.63
PDLIM3-212ENST00000620787 CPA6Q8N4T0 437 aa18.98■□□□□ 0.63
PDLIM3-212ENST00000620787 CAPSLQ8WWF8 208 aa18.98■□□□□ 0.63
PDLIM3-212ENST00000620787 KCNC2Q96PR1 638 aa18.98■□□□□ 0.63
PDLIM3-212ENST00000620787 EPYCQ99645 322 aa18.98■□□□□ 0.63
PDLIM3-212ENST00000620787 RNF167Q9H6Y7 350 aa18.98■□□□□ 0.63
PDLIM3-212ENST00000620787 SYN3O14994 580 aa18.98■□□□□ 0.63
PDLIM3-212ENST00000620787 CDK1P06493 297 aa18.98■□□□□ 0.63
PDLIM3-212ENST00000620787 ACRV1P26436 265 aa18.98■□□□□ 0.63
PDLIM3-212ENST00000620787 DNAJC22Q8N4W6 341 aa18.98■□□□□ 0.63
PDLIM3-212ENST00000620787 GGHQ92820 318 aa18.98■□□□□ 0.63
PDLIM3-212ENST00000620787 C7orf34Q96L11 122 aa18.98■□□□□ 0.63
PDLIM3-212ENST00000620787 REXO4Q9GZR2 422 aaKnown RBP18.98■□□□□ 0.63
PDLIM3-212ENST00000620787 SLC32A1Q9H598 525 aa18.98■□□□□ 0.63
PDLIM3-212ENST00000620787 LATS2Q9NRM7 1088 aa18.98■□□□□ 0.63
PDLIM3-212ENST00000620787 CAB39Q9Y376 341 aaPredicted RBP18.98■□□□□ 0.63
PDLIM3-212ENST00000620787 PCDHGA3Q9Y5H0 932 aa18.98■□□□□ 0.63
PDLIM3-212ENST00000620787 CA12O43570 354 aa18.97■□□□□ 0.63
PDLIM3-212ENST00000620787 DPM1O60762 260 aa18.97■□□□□ 0.63
PDLIM3-212ENST00000620787 GJB5O95377 273 aa18.97■□□□□ 0.63
PDLIM3-212ENST00000620787 KLKB1P03952 638 aa18.97■□□□□ 0.63
PDLIM3-212ENST00000620787 RPLP0P05388 317 aaKnown RBP18.97■□□□□ 0.63
PDLIM3-212ENST00000620787 MAPK1P28482 360 aa18.97■□□□□ 0.63
PDLIM3-212ENST00000620787 LIMK1P53667 647 aa18.97■□□□□ 0.63
PDLIM3-212ENST00000620787 SOWAHCQ53LP3 525 aaPredicted RBP18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms