RNA–Protein interactions for RNA: ENST00000613121.1

IGHV3-41-201, Transcript of immunoglobulin heavy variable 3-41 (pseudogene), humanhuman

BASIC

Gene IGHV3-41, Length 348 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-41-201ENST00000613121 NLNQ9BYT8 704 aa17.31■□□□□ 0.36
IGHV3-41-201ENST00000613121 POPDC3Q9HBV1 291 aa17.31■□□□□ 0.36
IGHV3-41-201ENST00000613121 IFT80Q9P2H3 777 aaPredicted RBP17.31■□□□□ 0.36
IGHV3-41-201ENST00000613121 CTNNAL1Q9UBT7 734 aa17.31■□□□□ 0.36
IGHV3-41-201ENST00000613121 PIKFYVEQ9Y2I7 2098 aa17.31■□□□□ 0.36
IGHV3-41-201ENST00000613121 ANKRD11Q6UB99 2663 aaPredicted RBP17.3■□□□□ 0.36
IGHV3-41-201ENST00000613121 LOC105369274A0A096LPK9 316 aa17.3■□□□□ 0.36
IGHV3-41-201ENST00000613121 LOC102723532A0A0G2JNH3 316 aa17.3■□□□□ 0.36
IGHV3-41-201ENST00000613121 HYKKA2RU49 373 aa17.3■□□□□ 0.36
IGHV3-41-201ENST00000613121 OR2A25A4D2G3 310 aa17.3■□□□□ 0.36
IGHV3-41-201ENST00000613121 NPEPPSL1A6NEC2 478 aa17.3■□□□□ 0.36
IGHV3-41-201ENST00000613121 TK2O00142 265 aa17.3■□□□□ 0.36
IGHV3-41-201ENST00000613121 PHGDHO43175 533 aaKnown RBP17.3■□□□□ 0.36
IGHV3-41-201ENST00000613121 NRP2O60462 931 aa17.3■□□□□ 0.36
IGHV3-41-201ENST00000613121 FAM155BO75949 473 aa17.3■□□□□ 0.36
IGHV3-41-201ENST00000613121 PIM1P11309 404 aaPredicted RBP17.3■□□□□ 0.36
IGHV3-41-201ENST00000613121 CCND1P24385 295 aa17.3■□□□□ 0.36
IGHV3-41-201ENST00000613121 HRH2P25021 359 aa17.3■□□□□ 0.36
IGHV3-41-201ENST00000613121 SLC9A5Q14940 896 aa17.3■□□□□ 0.36
IGHV3-41-201ENST00000613121 UAP1Q16222 522 aaPredicted RBP17.3■□□□□ 0.36
IGHV3-41-201ENST00000613121 LINC00303Q3SY05 128 aa17.3■□□□□ 0.36
IGHV3-41-201ENST00000613121 CRTC2Q53ET0 693 aaPredicted RBP17.3■□□□□ 0.36
IGHV3-41-201ENST00000613121 YOD1Q5VVQ6 348 aaPredicted RBP17.3■□□□□ 0.36
IGHV3-41-201ENST00000613121 ZNF517Q6ZMY9 492 aaPredicted RBP17.3■□□□□ 0.36
IGHV3-41-201ENST00000613121 RAPH1Q70E73 1250 aa17.3■□□□□ 0.36
IGHV3-41-201ENST00000613121 FRA10AC1Q70Z53 315 aa17.3■□□□□ 0.36
IGHV3-41-201ENST00000613121 SYVN1Q86TM6 617 aa17.3■□□□□ 0.36
IGHV3-41-201ENST00000613121 PAQR7Q86WK9 346 aa17.3■□□□□ 0.36
IGHV3-41-201ENST00000613121 IFT20Q8IY31 132 aa17.3■□□□□ 0.36
IGHV3-41-201ENST00000613121 OR4N4Q8N0Y3 316 aa17.3■□□□□ 0.36
IGHV3-41-201ENST00000613121 ANKRD49Q8WVL7 239 aa17.3■□□□□ 0.36
IGHV3-41-201ENST00000613121 ANKRD7Q92527 254 aa17.3■□□□□ 0.36
IGHV3-41-201ENST00000613121 RERGQ96A58 199 aaPredicted RBP17.3■□□□□ 0.36
IGHV3-41-201ENST00000613121 FMO2Q99518 471 aa17.3■□□□□ 0.36
IGHV3-41-201ENST00000613121 GPR22Q99680 433 aa17.3■□□□□ 0.36
IGHV3-41-201ENST00000613121 MCMBPQ9BTE3 642 aa17.3■□□□□ 0.36
IGHV3-41-201ENST00000613121 UNKQ9C0B0 810 aaKnown RBP17.3■□□□□ 0.36
IGHV3-41-201ENST00000613121 CUTCQ9NTM9 273 aa17.3■□□□□ 0.36
IGHV3-41-201ENST00000613121 NINJ2Q9NZG7 142 aa17.3■□□□□ 0.36
IGHV3-41-201ENST00000613121 NOVA2Q9UNW9 492 aaKnown RBP17.3■□□□□ 0.36
IGHV3-41-201ENST00000613121 SDK2Q58EX2 2172 aa17.29■□□□□ 0.36
IGHV3-41-201ENST00000613121 ZFHX4Q86UP3 3567 aa17.29■□□□□ 0.36
IGHV3-41-201ENST00000613121 H0YGG7 62 aa17.29■□□□□ 0.36
IGHV3-41-201ENST00000613121 RECKO95980 971 aa17.29■□□□□ 0.36
IGHV3-41-201ENST00000613121 ANXA5P08758 320 aa17.29■□□□□ 0.36
IGHV3-41-201ENST00000613121 CD63P08962 238 aa17.29■□□□□ 0.36
IGHV3-41-201ENST00000613121 CCDC166P0CW27 439 aa17.29■□□□□ 0.36
IGHV3-41-201ENST00000613121 ARF3P61204 181 aaPredicted RBP17.29■□□□□ 0.36
IGHV3-41-201ENST00000613121 NAB1Q13506 487 aa17.29■□□□□ 0.36
IGHV3-41-201ENST00000613121 SLMAPQ14BN4 828 aa17.29■□□□□ 0.36
IGHV3-41-201ENST00000613121 PCSK4Q6UW60 755 aa17.29■□□□□ 0.36
IGHV3-41-201ENST00000613121 RNF44Q7L0R7 432 aa17.29■□□□□ 0.36
IGHV3-41-201ENST00000613121 C17orf64Q86WR6 236 aa17.29■□□□□ 0.36
IGHV3-41-201ENST00000613121 SPATA6LQ8N4H0 392 aa17.29■□□□□ 0.36
IGHV3-41-201ENST00000613121 PYCR2Q96C36 320 aa17.29■□□□□ 0.36
IGHV3-41-201ENST00000613121 GBP5Q96PP8 586 aa17.29■□□□□ 0.36
IGHV3-41-201ENST00000613121 CYTH2Q99418 400 aa17.29■□□□□ 0.36
IGHV3-41-201ENST00000613121 HAUS8Q9BT25 410 aa17.29■□□□□ 0.36
IGHV3-41-201ENST00000613121 FAM117AQ9C073 453 aa17.29■□□□□ 0.36
IGHV3-41-201ENST00000613121 TMEM184CQ9NVA4 438 aa17.29■□□□□ 0.36
IGHV3-41-201ENST00000613121 CUEDC1Q9NWM3 386 aaPredicted RBP17.29■□□□□ 0.36
IGHV3-41-201ENST00000613121 IKZF3Q9UKT9 509 aa17.29■□□□□ 0.36
IGHV3-41-201ENST00000613121 TCFL5Q9UL49 500 aa17.29■□□□□ 0.36
IGHV3-41-201ENST00000613121 POLHQ9Y253 713 aa17.29■□□□□ 0.36
IGHV3-41-201ENST00000613121 PADI2Q9Y2J8 665 aa17.29■□□□□ 0.36
IGHV3-41-201ENST00000613121 PKD1L2Q7Z442 2459 aa17.29■□□□□ 0.36
IGHV3-41-201ENST00000613121 IGKV1-8A0A0C4DH67 115 aa17.28■□□□□ 0.36
IGHV3-41-201ENST00000613121 A0A1B0GX78 115 aa17.28■□□□□ 0.36
IGHV3-41-201ENST00000613121 ACSL3O95573 720 aa17.28■□□□□ 0.36
IGHV3-41-201ENST00000613121 C1QAP02745 245 aa17.28■□□□□ 0.36
IGHV3-41-201ENST00000613121 RHOXF2BP0C7M4 288 aa17.28■□□□□ 0.36
IGHV3-41-201ENST00000613121 FAM87AP0C7U9 286 aa17.28■□□□□ 0.36
IGHV3-41-201ENST00000613121 EZRP15311 586 aaKnown RBP17.28■□□□□ 0.36
IGHV3-41-201ENST00000613121 RAB10P61026 200 aa17.28■□□□□ 0.36
IGHV3-41-201ENST00000613121 EFTUD2Q15029 972 aaKnown RBP eCLIP17.28■□□□□ 0.36
IGHV3-41-201ENST00000613121 NCF4Q15080 339 aa17.28■□□□□ 0.36
IGHV3-41-201ENST00000613121 TSNQ15631 228 aaKnown RBP17.28■□□□□ 0.36
IGHV3-41-201ENST00000613121 NKAIN1Q4KMZ8 207 aa17.28■□□□□ 0.36
IGHV3-41-201ENST00000613121 ZNF385CQ66K41 422 aaPredicted RBP17.28■□□□□ 0.36
IGHV3-41-201ENST00000613121 ZNF425Q6IV72 752 aa17.28■□□□□ 0.36
IGHV3-41-201ENST00000613121 LCTLQ6UWM7 567 aa17.28■□□□□ 0.36
IGHV3-41-201ENST00000613121 SBSNQ6UWP8 590 aa17.28■□□□□ 0.36
IGHV3-41-201ENST00000613121 ADAMTSL2Q86TH1 951 aa17.28■□□□□ 0.36
IGHV3-41-201ENST00000613121 PLD3Q8IV08 490 aa17.28■□□□□ 0.36
IGHV3-41-201ENST00000613121 CSNK1A1LQ8N752 337 aa17.28■□□□□ 0.36
IGHV3-41-201ENST00000613121 APOBEC4Q8WW27 367 aaKnown RBP17.28■□□□□ 0.36
IGHV3-41-201ENST00000613121 FBXL8Q96CD0 374 aa17.28■□□□□ 0.36
IGHV3-41-201ENST00000613121 RHOXF2Q9BQY4 288 aa17.28■□□□□ 0.36
IGHV3-41-201ENST00000613121 DHRS4Q9BTZ2 278 aa17.28■□□□□ 0.36
IGHV3-41-201ENST00000613121 TXNDC9O14530 226 aa17.27■□□□□ 0.36
IGHV3-41-201ENST00000613121 HAT1O14929 419 aa17.27■□□□□ 0.36
IGHV3-41-201ENST00000613121 DSCR3O14972 297 aa17.27■□□□□ 0.36
IGHV3-41-201ENST00000613121 CAPN1P07384 714 aa17.27■□□□□ 0.36
IGHV3-41-201ENST00000613121 FURINP09958 794 aa17.27■□□□□ 0.36
IGHV3-41-201ENST00000613121 SFTPCP11686 197 aa17.27■□□□□ 0.36
IGHV3-41-201ENST00000613121 NPPBP16860 134 aa17.27■□□□□ 0.36
IGHV3-41-201ENST00000613121 GRK3P35626 688 aa17.27■□□□□ 0.36
IGHV3-41-201ENST00000613121 ATP6V0D1P61421 351 aa17.27■□□□□ 0.36
IGHV3-41-201ENST00000613121 CSHL1Q14406 222 aa17.27■□□□□ 0.36
IGHV3-41-201ENST00000613121 UGT8Q16880 541 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms