RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 RIPK1Q13546 671 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 TSTA3Q13630 321 aaPredicted RBP8.61□□□□□ -1.03
CCDC47-207ENST00000612558 LRP8Q14114 963 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 CLCA4Q14CN2 919 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 CYP2A13Q16696 494 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 MMEL1Q495T6 779 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 RFTN2Q52LD8 501 aaPredicted RBP8.61□□□□□ -1.03
CCDC47-207ENST00000612558 IL23RQ5VWK5 629 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 FBXW10Q5XX13 1052 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 LCTLQ6UWM7 567 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 SLCO4C1Q6ZQN7 724 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 LPCAT2Q7L5N7 544 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 RD3Q7Z3Z2 195 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 ABI3BPQ7Z7G0 1075 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 FUNDC1Q8IVP5 155 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 DEFB107AQ8IZN7 70 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 DSELQ8IZU8 1212 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 GJD3Q8N144 294 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 SPEM1Q8N4L4 309 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 RAB42Q8N4Z0 105 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 OR9I1Q8NGQ6 314 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 WDR20Q8TBZ3 569 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 OR1E3Q8WZA6 343 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 NEIL2Q969S2 332 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 CLDN23Q96B33 292 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 BIRC7Q96CA5 298 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 WDR34Q96EX3 536 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 PDXPQ96GD0 296 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 HAUS8Q9BT25 410 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 C1orf50Q9BV19 199 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 ACPTQ9BZG2 426 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 EHD1Q9H4M9 534 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 LRTM1Q9HBL6 345 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 C1orf109Q9NX04 203 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 ZIM2Q9NZV7 527 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 EIF3LQ9Y262 564 aaKnown RBP8.61□□□□□ -1.03
CCDC47-207ENST00000612558 PCDHGA11Q9Y5H2 935 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 CFAP20Q9Y6A4 193 aaKnown RBP8.61□□□□□ -1.03
CCDC47-207ENST00000612558 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.61□□□□□ -1.03
CCDC47-207ENST00000612558 KNL1Q8NG31 2342 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 TRIOO75962 3097 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 A0A088AWK7 358 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 IGHV1OR15-9A0A0B4J2B8 117 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 A0A1W2PPC4 97 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 ERVH48-1M5A8F1 160 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 SEC22BO75396 215 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 C1GALT1C1LP0DN25 315 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 G6PDP11413 515 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 HSD3B1P14060 373 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 HSD3B2P26439 372 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 RNF144AP50876 292 aaPredicted RBP8.61□□□□□ -1.03
CCDC47-207ENST00000612558 NEK2P51955 445 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 NME5P56597 212 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 SRP54P61011 504 aaKnown RBP8.61□□□□□ -1.03
CCDC47-207ENST00000612558 RPL38P63173 70 aaKnown RBP8.61□□□□□ -1.03
CCDC47-207ENST00000612558 CSTF3Q12996 717 aaKnown RBP8.61□□□□□ -1.03
CCDC47-207ENST00000612558 LAPTM5Q13571 262 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 KRT33BQ14525 404 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 PAGE2BQ5JRK9 111 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 WASHC2DQ5SRD0 308 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 TPRG1LQ5T0D9 272 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 C10orf62Q5T681 223 aaPredicted RBP8.61□□□□□ -1.03
CCDC47-207ENST00000612558 THEMIS2Q5TEJ8 643 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 CACHD1Q5VU97 1274 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 ATG9BQ674R7 924 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 SUSD1Q6UWL2 747 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 ABRAXAS1Q6UWZ7 409 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 WASH2PQ6VEQ5 465 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 TMPRSS11BQ86T26 416 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 ZFAND4Q86XD8 727 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 ULK2Q8IYT8 1036 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 PCYOX1LQ8NBM8 494 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 MAFAQ8NHW3 353 aaPredicted RBP8.61□□□□□ -1.03
CCDC47-207ENST00000612558 SLC5A11Q8WWX8 675 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 RLN3Q8WXF3 142 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 SMPDL3AQ92484 453 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 TSACCQ96A04 125 aaPredicted RBP8.61□□□□□ -1.03
CCDC47-207ENST00000612558 REPS1Q96D71 796 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 CAMK1GQ96NX5 476 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 IL17FQ96PD4 163 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 NPAS2Q99743 824 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 EFCAB11Q9BUY7 163 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 TPSD1Q9BZJ3 242 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 PCBD2Q9H0N5 130 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 CHRDQ9H2X0 955 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 MVB12BQ9H7P6 319 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 TBC1D17Q9HA65 648 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 BRF2Q9HAW0 419 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 WASH6PQ9NQA3 447 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 PRDM8Q9NQV8 689 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 IMP3Q9NV31 184 aaKnown RBP8.61□□□□□ -1.03
CCDC47-207ENST00000612558 TRNAU1APQ9NX07 287 aaKnown RBP8.61□□□□□ -1.03
CCDC47-207ENST00000612558 ASIC5Q9NY37 505 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 PLAGL1Q9UM63 463 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 PRPF19Q9UMS4 504 aaKnown RBP8.61□□□□□ -1.03
CCDC47-207ENST00000612558 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.61□□□□□ -1.03
CCDC47-207ENST00000612558 NDUFAF1Q9Y375 327 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 TMED5Q9Y3A6 229 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 HEBP2Q9Y5Z4 205 aa8.61□□□□□ -1.03
CCDC47-207ENST00000612558 DGKBQ9Y6T7 804 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms