RNA–Protein interactions for RNA: ENST00000604817.2

IGHV3-29-201, Transcript of immunoglobulin heavy variable 3-29 (pseudogene), humanhuman

BASIC

Gene IGHV3-29, Length 344 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-29-201ENST00000604817 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.77□□□□□ -1.81
IGHV3-29-201ENST00000604817 KCTD11Q693B1 232 aa3.77□□□□□ -1.81
IGHV3-29-201ENST00000604817 PM20D1Q6GTS8 502 aa3.77□□□□□ -1.81
IGHV3-29-201ENST00000604817 KLHL10Q6JEL2 608 aa3.77□□□□□ -1.81
IGHV3-29-201ENST00000604817 CYB5D1Q6P9G0 228 aa3.77□□□□□ -1.81
IGHV3-29-201ENST00000604817 KCNV1Q6PIU1 500 aa3.77□□□□□ -1.81
IGHV3-29-201ENST00000604817 FIGLAQ6QHK4 219 aa3.77□□□□□ -1.81
IGHV3-29-201ENST00000604817 TRILQ7L0X0 811 aa3.77□□□□□ -1.81
IGHV3-29-201ENST00000604817 LINGO2Q7L985 606 aa3.77□□□□□ -1.81
IGHV3-29-201ENST00000604817 IRF2BP2Q7Z5L9 587 aa3.77□□□□□ -1.81
IGHV3-29-201ENST00000604817 WDR53Q7Z5U6 358 aaPredicted RBP3.77□□□□□ -1.81
IGHV3-29-201ENST00000604817 AQP12AQ8IXF9 295 aa3.77□□□□□ -1.81
IGHV3-29-201ENST00000604817 MCPH1Q8NEM0 835 aa3.77□□□□□ -1.81
IGHV3-29-201ENST00000604817 TMEM185AQ8NFB2 350 aa3.77□□□□□ -1.81
IGHV3-29-201ENST00000604817 BEST2Q8NFU1 509 aa3.77□□□□□ -1.81
IGHV3-29-201ENST00000604817 ABHD11Q8NFV4 315 aa3.77□□□□□ -1.81
IGHV3-29-201ENST00000604817 EXD1Q8NHP7 514 aa3.77□□□□□ -1.81
IGHV3-29-201ENST00000604817 ELP5Q8TE02 316 aa3.77□□□□□ -1.81
IGHV3-29-201ENST00000604817 VOPP1Q96AW1 172 aa3.77□□□□□ -1.81
IGHV3-29-201ENST00000604817 AP2M1Q96CW1 435 aa3.77□□□□□ -1.81
IGHV3-29-201ENST00000604817 SPDL1Q96EA4 605 aa3.77□□□□□ -1.81
IGHV3-29-201ENST00000604817 P2RY11Q96G91 374 aa3.77□□□□□ -1.81
IGHV3-29-201ENST00000604817 PBKQ96KB5 322 aa3.77□□□□□ -1.81
IGHV3-29-201ENST00000604817 SMC6Q96SB8 1091 aa3.77□□□□□ -1.81
IGHV3-29-201ENST00000604817 ASCL2Q99929 193 aa3.77□□□□□ -1.81
IGHV3-29-201ENST00000604817 PCGF1Q9BSM1 259 aa3.77□□□□□ -1.81
IGHV3-29-201ENST00000604817 TBCDQ9BTW9 1192 aa3.77□□□□□ -1.81
IGHV3-29-201ENST00000604817 TPPP3Q9BW30 176 aa3.77□□□□□ -1.81
IGHV3-29-201ENST00000604817 FSD1LQ9BXM9 530 aa3.77□□□□□ -1.81
IGHV3-29-201ENST00000604817 POLR1EQ9GZS1 481 aaKnown RBP3.77□□□□□ -1.81
IGHV3-29-201ENST00000604817 RAB17Q9H0T7 212 aa3.77□□□□□ -1.81
IGHV3-29-201ENST00000604817 KCNMB3Q9NPA1 279 aa3.77□□□□□ -1.81
IGHV3-29-201ENST00000604817 KLHL1Q9NR64 748 aa3.77□□□□□ -1.81
IGHV3-29-201ENST00000604817 SMPD3Q9NY59 655 aaPredicted RBP3.77□□□□□ -1.81
IGHV3-29-201ENST00000604817 FLRT1Q9NZU1 646 aa3.77□□□□□ -1.81
IGHV3-29-201ENST00000604817 TESQ9UGI8 421 aaKnown RBP3.77□□□□□ -1.81
IGHV3-29-201ENST00000604817 UBQLN2Q9UHD9 624 aa3.77□□□□□ -1.81
IGHV3-29-201ENST00000604817 RNF150Q9ULK6 438 aa3.77□□□□□ -1.81
IGHV3-29-201ENST00000604817 GPR132Q9UNW8 380 aa3.77□□□□□ -1.81
IGHV3-29-201ENST00000604817 NAALAD2Q9Y3Q0 740 aa3.77□□□□□ -1.81
IGHV3-29-201ENST00000604817 JRKLQ9Y4A0 524 aa3.77□□□□□ -1.81
IGHV3-29-201ENST00000604817 COL2A1P02458 1487 aaPredicted RBP3.77□□□□□ -1.81
IGHV3-29-201ENST00000604817 EMSYQ7Z589 1322 aa3.76□□□□□ -1.81
IGHV3-29-201ENST00000604817 DDX60LQ5H9U9 1706 aaKnown RBP3.76□□□□□ -1.81
IGHV3-29-201ENST00000604817 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.76□□□□□ -1.81
IGHV3-29-201ENST00000604817 A0A087WZY1 265 aa3.76□□□□□ -1.81
IGHV3-29-201ENST00000604817 CENPVL1A0A0U1RR11 272 aa3.76□□□□□ -1.81
IGHV3-29-201ENST00000604817 XKRY2A2RUG3 117 aa3.76□□□□□ -1.81
IGHV3-29-201ENST00000604817 CTAGE15A4D2H0 777 aa3.76□□□□□ -1.81
IGHV3-29-201ENST00000604817 CXorf65A6NEN9 183 aa3.76□□□□□ -1.81
IGHV3-29-201ENST00000604817 TMEM191CA6NGB0 347 aa3.76□□□□□ -1.81
IGHV3-29-201ENST00000604817 TMEM221A6NGB7 291 aa3.76□□□□□ -1.81
IGHV3-29-201ENST00000604817 ANKDD1BA6NHY2 528 aa3.76□□□□□ -1.81
IGHV3-29-201ENST00000604817 H0YIG0 161 aa3.76□□□□□ -1.81
IGHV3-29-201ENST00000604817 E2F3O00716 465 aa3.76□□□□□ -1.81
IGHV3-29-201ENST00000604817 MAP2K7O14733 419 aa3.76□□□□□ -1.81
IGHV3-29-201ENST00000604817 PPEF2O14830 753 aa3.76□□□□□ -1.81
IGHV3-29-201ENST00000604817 YY2O15391 372 aa3.76□□□□□ -1.81
IGHV3-29-201ENST00000604817 AP5Z1O43299 807 aa3.76□□□□□ -1.81
IGHV3-29-201ENST00000604817 PLPP2O43688 288 aa3.76□□□□□ -1.81
IGHV3-29-201ENST00000604817 NUDT21O43809 227 aaKnown RBP3.76□□□□□ -1.81
IGHV3-29-201ENST00000604817 SSX5O60225 188 aa3.76□□□□□ -1.81
IGHV3-29-201ENST00000604817 ATP2C2O75185 946 aa3.76□□□□□ -1.81
IGHV3-29-201ENST00000604817 SCGB2A1O75556 95 aa3.76□□□□□ -1.81
IGHV3-29-201ENST00000604817 VNN2O95498 520 aa3.76□□□□□ -1.81
IGHV3-29-201ENST00000604817 PCCBP05166 539 aa3.76□□□□□ -1.81
IGHV3-29-201ENST00000604817 CD63P08962 238 aa3.76□□□□□ -1.81
IGHV3-29-201ENST00000604817 CTAGE8P0CG41 777 aa3.76□□□□□ -1.81
IGHV3-29-201ENST00000604817 SPP1P10451 314 aa3.76□□□□□ -1.81
IGHV3-29-201ENST00000604817 CYP2D6P10635 497 aa3.76□□□□□ -1.81
IGHV3-29-201ENST00000604817 THRBP10828 461 aa3.76□□□□□ -1.81
IGHV3-29-201ENST00000604817 ITGAMP11215 1152 aa3.76□□□□□ -1.81
IGHV3-29-201ENST00000604817 ENGP17813 658 aa3.76□□□□□ -1.81
IGHV3-29-201ENST00000604817 CD22P20273 847 aa3.76□□□□□ -1.81
IGHV3-29-201ENST00000604817 NR4A1P22736 598 aa3.76□□□□□ -1.81
IGHV3-29-201ENST00000604817 ZFP36P26651 326 aaKnown RBP3.76□□□□□ -1.81
IGHV3-29-201ENST00000604817 AVPR1BP47901 424 aa3.76□□□□□ -1.81
IGHV3-29-201ENST00000604817 ASCL1P50553 236 aa3.76□□□□□ -1.81
IGHV3-29-201ENST00000604817 FOLH1Q04609 750 aa3.76□□□□□ -1.81
IGHV3-29-201ENST00000604817 SNX1Q13596 522 aa3.76□□□□□ -1.81
IGHV3-29-201ENST00000604817 TP53BP2Q13625 1128 aa3.76□□□□□ -1.81
IGHV3-29-201ENST00000604817 MXD4Q14582 209 aaPredicted RBP3.76□□□□□ -1.81
IGHV3-29-201ENST00000604817 LARS2Q15031 903 aaKnown RBP3.76□□□□□ -1.81
IGHV3-29-201ENST00000604817 SHHQ15465 462 aa3.76□□□□□ -1.81
IGHV3-29-201ENST00000604817 LRRC26Q2I0M4 334 aa3.76□□□□□ -1.81
IGHV3-29-201ENST00000604817 FAM174BQ3ZCQ3 159 aa3.76□□□□□ -1.81
IGHV3-29-201ENST00000604817 CFAP221Q4G0U5 840 aa3.76□□□□□ -1.81
IGHV3-29-201ENST00000604817 PRAMEF19Q5SWL8 479 aa3.76□□□□□ -1.81
IGHV3-29-201ENST00000604817 ATAD3BQ5T9A4 648 aa3.76□□□□□ -1.81
IGHV3-29-201ENST00000604817 DCAF12L2Q5VW00 463 aa3.76□□□□□ -1.81
IGHV3-29-201ENST00000604817 KIAA0895LQ68EN5 471 aa3.76□□□□□ -1.81
IGHV3-29-201ENST00000604817 CES5AQ6NT32 575 aa3.76□□□□□ -1.81
IGHV3-29-201ENST00000604817 PCSK4Q6UW60 755 aa3.76□□□□□ -1.81
IGHV3-29-201ENST00000604817 MACC1Q6ZN28 852 aa3.76□□□□□ -1.81
IGHV3-29-201ENST00000604817 OTUD6AQ7L8S5 288 aa3.76□□□□□ -1.81
IGHV3-29-201ENST00000604817 TFAP2DQ7Z6R9 452 aa3.76□□□□□ -1.81
IGHV3-29-201ENST00000604817 CTAGE6Q86UF2 777 aa3.76□□□□□ -1.81
IGHV3-29-201ENST00000604817 EGFL6Q8IUX8 553 aa3.76□□□□□ -1.81
IGHV3-29-201ENST00000604817 CTAGE4Q8IX94 777 aa3.76□□□□□ -1.81
IGHV3-29-201ENST00000604817 ZNF679Q8IYX0 411 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms