RNA–Protein interactions for RNA: ENST00000604516.1

HMGN3-AS1-201, HMGN3 antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene HMGN3-AS1, Length 2,946 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-AS1-201ENST00000604516 CD47Q08722 323 aa11.42□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 TCEAL5Q5H9L2 206 aa11.42□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 TMEM220Q6QAJ8 160 aa11.42□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 CEP68Q76N32 757 aa11.42□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 ARHGAP22Q7Z5H3 698 aa11.42□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 ZDHHC21Q8IVQ6 265 aa11.42□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 CHPFQ8IZ52 775 aa11.42□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 SH3KBP1Q96B97 665 aa11.42□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 AP2M1Q96CW1 435 aa11.42□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 REXO5Q96IC2 774 aaKnown RBP11.42□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 OSBPL6Q9BZF3 934 aa11.42□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 STOX2Q9P2F5 926 aaPredicted RBP11.42□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 MYO1GB0I1T2 1018 aa11.42□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 WASH3PC4AMC7 463 aa11.42□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 K7ESM1 405 aa11.42□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 KPNA3O00505 521 aaPredicted RBP11.42□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 NTRK1P04629 796 aa11.42□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 CYP2A6P11509 494 aaPredicted RBP11.42□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 EPCAMP16422 314 aa11.42□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 ZNF30P17039 623 aa11.42□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 NR4A1P22736 598 aa11.42□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 ENTPD1P49961 510 aa11.42□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 GALK1P51570 392 aa11.42□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 EMP3P54852 163 aa11.42□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 CREMQ03060 361 aa11.42□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 ABHD18Q0P651 414 aa11.42□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 TMEM115Q12893 351 aaPredicted RBP11.42□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 LAIR2Q6ISS4 152 aa11.42□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 GRASPQ7Z6J2 395 aaPredicted RBP11.42□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 ADHFE1Q8IWW8 467 aa11.42□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 ALDH16A1Q8IZ83 802 aa11.42□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 EID3Q8N140 333 aa11.42□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 WDR20Q8TBZ3 569 aa11.42□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 BTN2A2Q8WVV5 523 aa11.42□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 FBXL8Q96CD0 374 aa11.42□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 RBM4BQ9BQ04 359 aaKnown RBP11.42□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 RBM4Q9BWF3 364 aaKnown RBP11.42□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 SGK2Q9HBY8 427 aa11.42□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 TIMMDC1Q9NPL8 285 aa11.42□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 GULP1Q9UBP9 304 aa11.42□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 TMEFF2Q9UIK5 374 aaPredicted RBP11.42□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 KIAA1671Q9BY89 1806 aa11.41□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 TRANK1O15050 2925 aa11.41□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 LOC100130705A0A1B0GUX0 176 aa11.41□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 EVPLLA8MZ36 301 aa11.41□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 WNT9AO14904 365 aa11.41□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 ARHGEF15O94989 841 aa11.41□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 KCNK5O95279 499 aa11.41□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 FTH1P02794 183 aa11.41□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 ELFN1P0C7U0 828 aa11.41□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 PRPS1L1P21108 318 aa11.41□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 MAPK1P28482 360 aa11.41□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 AQP1P29972 269 aa11.41□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 NNMTP40261 264 aa11.41□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 ACSM2AQ08AH3 577 aa11.41□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 SP140Q13342 867 aa11.41□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 BIRC2Q13490 618 aa11.41□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 ZNF284Q2VY69 593 aa11.41□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 ACSM2BQ68CK6 577 aa11.41□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 XAF1Q6GPH4 301 aa11.41□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 ZNF773Q6PK81 442 aa11.41□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 CYP4Z1Q86W10 505 aa11.41□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 C12orf40Q86WS4 652 aa11.41□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 DCP2Q8IU60 420 aaKnown RBP11.41□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 GALNT13Q8IUC8 556 aa11.41□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 ZCCHC7Q8N3Z6 543 aaKnown RBP11.41□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 C1orf52Q8N6N3 182 aaKnown RBP11.41□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 MRPL43Q8N983 215 aaKnown RBP11.41□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 CHDHQ8NE62 594 aaPredicted RBP11.41□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 DDHD1Q8NEL9 900 aa11.41□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 MAL2Q969L2 176 aa11.41□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 PKP4Q99569 1192 aa11.41□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 ZDHHC4Q9NPG8 344 aa11.41□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 IL36AQ9UHA7 158 aa11.41□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 TMED5Q9Y3A6 229 aa11.41□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 PCM1Q15154 2024 aa11.41□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 ANTXRLA6NF34 631 aa11.41□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 HTR1AP08908 422 aa11.41□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 GSTM1P09488 218 aa11.41□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 HLA-EP13747 358 aa11.41□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 PTPN2P17706 415 aa11.41□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 PRPH2P23942 346 aa11.41□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 FSHRP23945 695 aa11.41□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 IMPA1P29218 277 aa11.41□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 IRS1P35568 1242 aa11.41□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 GSTM4Q03013 218 aa11.41□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 SIM2Q14190 667 aaPredicted RBP11.41□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 ZNF77Q15935 545 aa11.41□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 DUOXA1Q1HG43 343 aa11.41□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 HKDC1Q2TB90 917 aa11.41□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 C6orf141Q5SZD1 244 aa11.41□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 TTC23Q5W5X9 447 aa11.41□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 LIPIQ6XZB0 460 aa11.41□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 TRAM1L1Q8N609 369 aa11.41□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 ZNF555Q8NEP9 628 aa11.41□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 CNIH3Q8TBE1 160 aa11.41□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 CSGALNACT1Q8TDX6 532 aa11.41□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 NELL1Q92832 810 aa11.41□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 GLYATL1Q969I3 302 aa11.41□□□□□ -0.58
HMGN3-AS1-201ENST00000604516 NEIL2Q969S2 332 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms