RNA–Protein interactions for RNA: ENST00000602253.5

ZNF546-209, Transcript of zinc finger protein 546, humanhuman

TSL 3

Gene ZNF546, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546-209ENST00000602253 ACKR1Q16570 336 aa3.97□□□□□ -1.77
ZNF546-209ENST00000602253 MAPKAPK3Q16644 382 aa3.97□□□□□ -1.77
ZNF546-209ENST00000602253 MEP1AQ16819 746 aa3.97□□□□□ -1.77
ZNF546-209ENST00000602253 FAM174BQ3ZCQ3 159 aa3.97□□□□□ -1.77
ZNF546-209ENST00000602253 PTPN20Q4JDL3 420 aa3.97□□□□□ -1.77
ZNF546-209ENST00000602253 VWA3BQ502W6 1294 aa3.97□□□□□ -1.77
ZNF546-209ENST00000602253 DCAF17Q5H9S7 520 aaPredicted RBP3.97□□□□□ -1.77
ZNF546-209ENST00000602253 ACER2Q5QJU3 275 aa3.97□□□□□ -1.77
ZNF546-209ENST00000602253 METRNLQ641Q3 311 aa3.97□□□□□ -1.77
ZNF546-209ENST00000602253 SPINK14Q6IE38 97 aa3.97□□□□□ -1.77
ZNF546-209ENST00000602253 H3F3CQ6NXT2 135 aa3.97□□□□□ -1.77
ZNF546-209ENST00000602253 TUBA3EQ6PEY2 450 aa3.97□□□□□ -1.77
ZNF546-209ENST00000602253 KDELC1Q6UW63 502 aa3.97□□□□□ -1.77
ZNF546-209ENST00000602253 B3GNT6Q6ZMB0 384 aa3.97□□□□□ -1.77
ZNF546-209ENST00000602253 NEK10Q6ZWH5 1172 aa3.97□□□□□ -1.77
ZNF546-209ENST00000602253 HOOK3Q86VS8 718 aa3.97□□□□□ -1.77
ZNF546-209ENST00000602253 AMZ2Q86W34 360 aa3.97□□□□□ -1.77
ZNF546-209ENST00000602253 MEX3DQ86XN8 651 aaKnown RBP3.97□□□□□ -1.77
ZNF546-209ENST00000602253 ZNF547Q8IVP9 402 aa3.97□□□□□ -1.77
ZNF546-209ENST00000602253 MCUQ8NE86 351 aa3.97□□□□□ -1.77
ZNF546-209ENST00000602253 BHLHE22Q8NFJ8 381 aaPredicted RBP3.97□□□□□ -1.77
ZNF546-209ENST00000602253 LMO3Q8TAP4 145 aa3.97□□□□□ -1.77
ZNF546-209ENST00000602253 STT3BQ8TCJ2 826 aa3.97□□□□□ -1.77
ZNF546-209ENST00000602253 CCHCR1Q8TD31 782 aa3.97□□□□□ -1.77
ZNF546-209ENST00000602253 SMPDL3BQ92485 455 aa3.97□□□□□ -1.77
ZNF546-209ENST00000602253 MIEF2Q96C03 454 aa3.97□□□□□ -1.77
ZNF546-209ENST00000602253 C18orf8Q96DM3 657 aa3.97□□□□□ -1.77
ZNF546-209ENST00000602253 EIF3CQ99613 913 aaKnown RBP3.97□□□□□ -1.77
ZNF546-209ENST00000602253 CCL19Q99731 98 aa3.97□□□□□ -1.77
ZNF546-209ENST00000602253 MESP1Q9BRJ9 268 aa3.97□□□□□ -1.77
ZNF546-209ENST00000602253 HES7Q9BYE0 225 aa3.97□□□□□ -1.77
ZNF546-209ENST00000602253 REG4Q9BYZ8 158 aa3.97□□□□□ -1.77
ZNF546-209ENST00000602253 PRDM14Q9GZV8 571 aa3.97□□□□□ -1.77
ZNF546-209ENST00000602253 SRMSQ9H3Y6 488 aa3.97□□□□□ -1.77
ZNF546-209ENST00000602253 NOD2Q9HC29 1040 aa3.97□□□□□ -1.77
ZNF546-209ENST00000602253 FAM60AQ9NP50 221 aa3.97□□□□□ -1.77
ZNF546-209ENST00000602253 ARFGAP3Q9NP61 516 aa3.97□□□□□ -1.77
ZNF546-209ENST00000602253 IMP3Q9NV31 184 aaKnown RBP3.97□□□□□ -1.77
ZNF546-209ENST00000602253 IRAK4Q9NWZ3 460 aa3.97□□□□□ -1.77
ZNF546-209ENST00000602253 PKD2L2Q9NZM6 624 aa3.97□□□□□ -1.77
ZNF546-209ENST00000602253 GPR160Q9UJ42 338 aa3.97□□□□□ -1.77
ZNF546-209ENST00000602253 C3orf18Q9UK00 162 aa3.97□□□□□ -1.77
ZNF546-209ENST00000602253 PSMD13Q9UNM6 376 aa3.97□□□□□ -1.77
ZNF546-209ENST00000602253 EIF3LQ9Y262 564 aaKnown RBP3.97□□□□□ -1.77
ZNF546-209ENST00000602253 SNRNP200O75643 2136 aaKnown RBP3.97□□□□□ -1.77
ZNF546-209ENST00000602253 VWFP04275 2813 aa3.96□□□□□ -1.78
ZNF546-209ENST00000602253 C2orf74A8MZ97 194 aa3.96□□□□□ -1.78
ZNF546-209ENST00000602253 KLRC4-KLRK1H3BQV0 150 aa3.96□□□□□ -1.78
ZNF546-209ENST00000602253 QSOX1O00391 747 aa3.96□□□□□ -1.78
ZNF546-209ENST00000602253 CASKO14936 926 aa3.96□□□□□ -1.78
ZNF546-209ENST00000602253 TFECO14948 347 aaPredicted RBP3.96□□□□□ -1.78
ZNF546-209ENST00000602253 DSCR3O14972 297 aa3.96□□□□□ -1.78
ZNF546-209ENST00000602253 P4HA2O15460 535 aa3.96□□□□□ -1.78
ZNF546-209ENST00000602253 FGF10O15520 208 aaPredicted RBP3.96□□□□□ -1.78
ZNF546-209ENST00000602253 HCRTR1O43613 425 aa3.96□□□□□ -1.78
ZNF546-209ENST00000602253 CDC40O60508 579 aaKnown RBP eCLIP3.96□□□□□ -1.78
ZNF546-209ENST00000602253 PDHA1P08559 390 aa3.96□□□□□ -1.78
ZNF546-209ENST00000602253 KRT9P35527 623 aa3.96□□□□□ -1.78
ZNF546-209ENST00000602253 FMO5P49326 533 aa3.96□□□□□ -1.78
ZNF546-209ENST00000602253 ASCL1P50553 236 aa3.96□□□□□ -1.78
ZNF546-209ENST00000602253 TMPRSS15P98073 1019 aa3.96□□□□□ -1.78
ZNF546-209ENST00000602253 OC90Q02509 493 aaPredicted RBP3.96□□□□□ -1.78
ZNF546-209ENST00000602253 KRT33BQ14525 404 aa3.96□□□□□ -1.78
ZNF546-209ENST00000602253 FAM214AQ32MH5 1076 aa3.96□□□□□ -1.78
ZNF546-209ENST00000602253 BBS9Q3SYG4 887 aa3.96□□□□□ -1.78
ZNF546-209ENST00000602253 ANKRD20A8PQ5CZ79 823 aa3.96□□□□□ -1.78
ZNF546-209ENST00000602253 FAM102AQ5T9C2 384 aaPredicted RBP3.96□□□□□ -1.78
ZNF546-209ENST00000602253 YOD1Q5VVQ6 348 aaPredicted RBP3.96□□□□□ -1.78
ZNF546-209ENST00000602253 PDPK2PQ6A1A2 396 aa3.96□□□□□ -1.78
ZNF546-209ENST00000602253 FBXO42Q6P3S6 717 aa3.96□□□□□ -1.78
ZNF546-209ENST00000602253 UNC5DQ6UXZ4 953 aa3.96□□□□□ -1.78
ZNF546-209ENST00000602253 RNF111Q6ZNA4 994 aa3.96□□□□□ -1.78
ZNF546-209ENST00000602253 COX15Q7KZN9 410 aa3.96□□□□□ -1.78
ZNF546-209ENST00000602253 STRADAQ7RTN6 431 aa3.96□□□□□ -1.78
ZNF546-209ENST00000602253 NLRP9Q7RTR0 991 aa3.96□□□□□ -1.78
ZNF546-209ENST00000602253 SLFN11Q7Z7L1 901 aa3.96□□□□□ -1.78
ZNF546-209ENST00000602253 C1QL4Q86Z23 238 aa3.96□□□□□ -1.78
ZNF546-209ENST00000602253 ARHGEF19Q8IW93 802 aa3.96□□□□□ -1.78
ZNF546-209ENST00000602253 LILRA2Q8N149 483 aa3.96□□□□□ -1.78
ZNF546-209ENST00000602253 BEST3Q8N1M1 668 aa3.96□□□□□ -1.78
ZNF546-209ENST00000602253 DNAJC22Q8N4W6 341 aa3.96□□□□□ -1.78
ZNF546-209ENST00000602253 C3orf56Q8N813 242 aa3.96□□□□□ -1.78
ZNF546-209ENST00000602253 C19orf47Q8N9M1 422 aaKnown RBP3.96□□□□□ -1.78
ZNF546-209ENST00000602253 MAPK1IP1LQ8NDC0 245 aa3.96□□□□□ -1.78
ZNF546-209ENST00000602253 ACVR1CQ8NER5 493 aa3.96□□□□□ -1.78
ZNF546-209ENST00000602253 C16orf52Q8NHV5 167 aa3.96□□□□□ -1.78
ZNF546-209ENST00000602253 PPP1R14CQ8TAE6 165 aa3.96□□□□□ -1.78
ZNF546-209ENST00000602253 LINC01560Q8TB33 94 aa3.96□□□□□ -1.78
ZNF546-209ENST00000602253 ENOX1Q8TC92 643 aaKnown RBP3.96□□□□□ -1.78
ZNF546-209ENST00000602253 BRSK1Q8TDC3 778 aa3.96□□□□□ -1.78
ZNF546-209ENST00000602253 LCN9Q8WX39 176 aa3.96□□□□□ -1.78
ZNF546-209ENST00000602253 GLYATL1Q969I3 302 aa3.96□□□□□ -1.78
ZNF546-209ENST00000602253 SLC35C1Q96A29 364 aa3.96□□□□□ -1.78
ZNF546-209ENST00000602253 NTAN1Q96AB6 310 aa3.96□□□□□ -1.78
ZNF546-209ENST00000602253 ZBED6CLQ96FA7 236 aaPredicted RBP3.96□□□□□ -1.78
ZNF546-209ENST00000602253 IMMP1LQ96LU5 166 aa3.96□□□□□ -1.78
ZNF546-209ENST00000602253 C12orf66Q96MD2 445 aa3.96□□□□□ -1.78
ZNF546-209ENST00000602253 ZNF599Q96NL3 588 aa3.96□□□□□ -1.78
ZNF546-209ENST00000602253 DACH2Q96NX9 599 aa3.96□□□□□ -1.78
ZNF546-209ENST00000602253 SH3GL2Q99962 352 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms