RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 CTAGE4Q8IX94 777 aa10.52□□□□□ -0.73
SHKBP1-206ENST00000595523 DTWD1Q8N5C7 304 aa10.52□□□□□ -0.73
SHKBP1-206ENST00000595523 ENDOVQ8N8Q3 282 aaKnown RBP10.52□□□□□ -0.73
SHKBP1-206ENST00000595523 KIF18AQ8NI77 898 aa10.52□□□□□ -0.73
SHKBP1-206ENST00000595523 MCOLN3Q8TDD5 553 aa10.52□□□□□ -0.73
SHKBP1-206ENST00000595523 TRIM44Q96DX7 344 aaPredicted RBP10.52□□□□□ -0.73
SHKBP1-206ENST00000595523 CCDC138Q96M89 665 aa10.52□□□□□ -0.73
SHKBP1-206ENST00000595523 RBBP8Q99708 897 aa10.52□□□□□ -0.73
SHKBP1-206ENST00000595523 SELENOSQ9BQE4 189 aa10.52□□□□□ -0.73
SHKBP1-206ENST00000595523 PLCD4Q9BRC7 762 aa10.52□□□□□ -0.73
SHKBP1-206ENST00000595523 NLNQ9BYT8 704 aa10.52□□□□□ -0.73
SHKBP1-206ENST00000595523 MRPS30Q9NP92 439 aaKnown RBP10.52□□□□□ -0.73
SHKBP1-206ENST00000595523 ABCF3Q9NUQ8 709 aa10.52□□□□□ -0.73
SHKBP1-206ENST00000595523 FARSAQ9Y285 508 aaKnown RBP10.52□□□□□ -0.73
SHKBP1-206ENST00000595523 FLNCQ14315 2725 aa10.52□□□□□ -0.73
SHKBP1-206ENST00000595523 CDC14CA4D256 554 aa10.51□□□□□ -0.73
SHKBP1-206ENST00000595523 NPEPPSL1A6NEC2 478 aa10.51□□□□□ -0.73
SHKBP1-206ENST00000595523 CDC7O00311 574 aa10.51□□□□□ -0.73
SHKBP1-206ENST00000595523 HAT1O14929 419 aa10.51□□□□□ -0.73
SHKBP1-206ENST00000595523 KLF7O75840 302 aaPredicted RBP10.51□□□□□ -0.73
SHKBP1-206ENST00000595523 RECKO95980 971 aa10.51□□□□□ -0.73
SHKBP1-206ENST00000595523 GP5P40197 560 aa10.51□□□□□ -0.73
SHKBP1-206ENST00000595523 FOXL2P58012 376 aa10.51□□□□□ -0.73
SHKBP1-206ENST00000595523 RPS15P62841 145 aaKnown RBP10.51□□□□□ -0.73
SHKBP1-206ENST00000595523 SNRPNP63162 240 aaKnown RBP10.51□□□□□ -0.73
SHKBP1-206ENST00000595523 ABATP80404 500 aa10.51□□□□□ -0.73
SHKBP1-206ENST00000595523 MC1RQ01726 317 aa10.51□□□□□ -0.73
SHKBP1-206ENST00000595523 POU4F1Q01851 419 aa10.51□□□□□ -0.73
SHKBP1-206ENST00000595523 SLC9A5Q14940 896 aa10.51□□□□□ -0.73
SHKBP1-206ENST00000595523 NCF4Q15080 339 aa10.51□□□□□ -0.73
SHKBP1-206ENST00000595523 DEFB109BQ30KR1 87 aa10.51□□□□□ -0.73
SHKBP1-206ENST00000595523 WASHC2DQ5SRD0 308 aa10.51□□□□□ -0.73
SHKBP1-206ENST00000595523 PRAMEF13Q5VWM6 474 aa10.51□□□□□ -0.73
SHKBP1-206ENST00000595523 BORAQ6PGQ7 559 aa10.51□□□□□ -0.73
SHKBP1-206ENST00000595523 SYVN1Q86TM6 617 aa10.51□□□□□ -0.73
SHKBP1-206ENST00000595523 MNS1Q8NEH6 495 aa10.51□□□□□ -0.73
SHKBP1-206ENST00000595523 PROKR1Q8TCW9 393 aa10.51□□□□□ -0.73
SHKBP1-206ENST00000595523 ADAMTS17Q8TE56 1095 aa10.51□□□□□ -0.73
SHKBP1-206ENST00000595523 FBF1Q8TES7 1133 aa10.51□□□□□ -0.73
SHKBP1-206ENST00000595523 CDKL2Q92772 493 aa10.51□□□□□ -0.73
SHKBP1-206ENST00000595523 C10orf90Q96M02 699 aa10.51□□□□□ -0.73
SHKBP1-206ENST00000595523 CATSPER2Q96P56 530 aa10.51□□□□□ -0.73
SHKBP1-206ENST00000595523 OR2A5Q96R48 311 aa10.51□□□□□ -0.73
SHKBP1-206ENST00000595523 GPR22Q99680 433 aa10.51□□□□□ -0.73
SHKBP1-206ENST00000595523 CPNE1Q99829 537 aa10.51□□□□□ -0.73
SHKBP1-206ENST00000595523 ZFYVE21Q9BQ24 234 aa10.51□□□□□ -0.73
SHKBP1-206ENST00000595523 DPH2Q9BQC3 489 aaPredicted RBP10.51□□□□□ -0.73
SHKBP1-206ENST00000595523 NDC1Q9BTX1 674 aa10.51□□□□□ -0.73
SHKBP1-206ENST00000595523 SGPP1Q9BX95 441 aa10.51□□□□□ -0.73
SHKBP1-206ENST00000595523 SLC7A5P2Q9GIP4 190 aa10.51□□□□□ -0.73
SHKBP1-206ENST00000595523 ATG10Q9H0Y0 220 aa10.51□□□□□ -0.73
SHKBP1-206ENST00000595523 POPDC3Q9HBV1 291 aa10.51□□□□□ -0.73
SHKBP1-206ENST00000595523 CCDC177Q9NQR7 707 aaPredicted RBP10.51□□□□□ -0.73
SHKBP1-206ENST00000595523 CUTCQ9NTM9 273 aa10.51□□□□□ -0.73
SHKBP1-206ENST00000595523 IRAK4Q9NWZ3 460 aa10.51□□□□□ -0.73
SHKBP1-206ENST00000595523 ANKMY1Q9P2S6 941 aa10.51□□□□□ -0.73
SHKBP1-206ENST00000595523 TCFL5Q9UL49 500 aa10.51□□□□□ -0.73
SHKBP1-206ENST00000595523 SRPK3Q9UPE1 567 aa10.51□□□□□ -0.73
SHKBP1-206ENST00000595523 KCNMB2Q9Y691 235 aa10.51□□□□□ -0.73
SHKBP1-206ENST00000595523 CNTRLQ7Z7A1 2325 aa10.51□□□□□ -0.73
SHKBP1-206ENST00000595523 A0A1B0GX78 115 aa10.5□□□□□ -0.73
SHKBP1-206ENST00000595523 H0YGG7 62 aa10.5□□□□□ -0.73
SHKBP1-206ENST00000595523 PHGDHO43175 533 aaKnown RBP10.5□□□□□ -0.73
SHKBP1-206ENST00000595523 SRPX2O60687 465 aaPredicted RBP10.5□□□□□ -0.73
SHKBP1-206ENST00000595523 CCNDBP1O95273 360 aa10.5□□□□□ -0.73
SHKBP1-206ENST00000595523 ONECUT2O95948 504 aa10.5□□□□□ -0.73
SHKBP1-206ENST00000595523 STX2P32856 288 aa10.5□□□□□ -0.73
SHKBP1-206ENST00000595523 GMPRP36959 345 aa10.5□□□□□ -0.73
SHKBP1-206ENST00000595523 POLE2P56282 527 aa10.5□□□□□ -0.73
SHKBP1-206ENST00000595523 AP1S2P56377 157 aa10.5□□□□□ -0.73
SHKBP1-206ENST00000595523 ARF3P61204 181 aaPredicted RBP10.5□□□□□ -0.73
SHKBP1-206ENST00000595523 DCDP81605 110 aaKnown RBP10.5□□□□□ -0.73
SHKBP1-206ENST00000595523 NAE1Q13564 534 aa10.5□□□□□ -0.73
SHKBP1-206ENST00000595523 GRM7Q14831 915 aa10.5□□□□□ -0.73
SHKBP1-206ENST00000595523 NAA25Q14CX7 972 aa10.5□□□□□ -0.73
SHKBP1-206ENST00000595523 ZKSCAN8Q15776 578 aaPredicted RBP10.5□□□□□ -0.73
SHKBP1-206ENST00000595523 UGT8Q16880 541 aa10.5□□□□□ -0.73
SHKBP1-206ENST00000595523 PRTGQ2VWP7 1150 aa10.5□□□□□ -0.73
SHKBP1-206ENST00000595523 NKAIN1Q4KMZ8 207 aa10.5□□□□□ -0.73
SHKBP1-206ENST00000595523 TCTE1Q5JU00 501 aa10.5□□□□□ -0.73
SHKBP1-206ENST00000595523 THEMIS2Q5TEJ8 643 aa10.5□□□□□ -0.73
SHKBP1-206ENST00000595523 MRPL14Q6P1L8 145 aaKnown RBP10.5□□□□□ -0.73
SHKBP1-206ENST00000595523 TTLL10Q6ZVT0 673 aa10.5□□□□□ -0.73
SHKBP1-206ENST00000595523 COX15Q7KZN9 410 aa10.5□□□□□ -0.73
SHKBP1-206ENST00000595523 RELL1Q8IUW5 271 aa10.5□□□□□ -0.73
SHKBP1-206ENST00000595523 PLD3Q8IV08 490 aa10.5□□□□□ -0.73
SHKBP1-206ENST00000595523 CTAGE3PQ8IX95 158 aa10.5□□□□□ -0.73
SHKBP1-206ENST00000595523 ZNF843Q8N446 348 aa10.5□□□□□ -0.73
SHKBP1-206ENST00000595523 ARHGEF39Q8N4T4 335 aa10.5□□□□□ -0.73
SHKBP1-206ENST00000595523 NKAPQ8N5F7 415 aaKnown RBP10.5□□□□□ -0.73
SHKBP1-206ENST00000595523 PPM1NQ8N819 430 aa10.5□□□□□ -0.73
SHKBP1-206ENST00000595523 LRRN4CLQ8ND94 238 aa10.5□□□□□ -0.73
SHKBP1-206ENST00000595523 OR56A3Q8NH54 315 aa10.5□□□□□ -0.73
SHKBP1-206ENST00000595523 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.5□□□□□ -0.73
SHKBP1-206ENST00000595523 ANKRD7Q92527 254 aa10.5□□□□□ -0.73
SHKBP1-206ENST00000595523 PYCR2Q96C36 320 aa10.5□□□□□ -0.73
SHKBP1-206ENST00000595523 FBXL8Q96CD0 374 aa10.5□□□□□ -0.73
SHKBP1-206ENST00000595523 MED8Q96G25 268 aa10.5□□□□□ -0.73
SHKBP1-206ENST00000595523 OR4K3Q96R72 315 aa10.5□□□□□ -0.73
SHKBP1-206ENST00000595523 FAM117AQ9C073 453 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms