RNA–Protein interactions for RNA: ENST00000593099.5

LIG3-216, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 4,664 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-216ENST00000593099 WASF2Q9Y6W5 498 aa9.55□□□□□ -0.88
LIG3-216ENST00000593099 ZCWPW2A0A1B0GU75 182 aa9.55□□□□□ -0.88
LIG3-216ENST00000593099 SAP18O00422 153 aaKnown RBP9.55□□□□□ -0.88
LIG3-216ENST00000593099 SLC28A2O43868 658 aa9.55□□□□□ -0.88
LIG3-216ENST00000593099 OR6A2O95222 327 aa9.55□□□□□ -0.88
LIG3-216ENST00000593099 MATN4O95460 622 aa9.55□□□□□ -0.88
LIG3-216ENST00000593099 CD27P26842 260 aa9.55□□□□□ -0.88
LIG3-216ENST00000593099 POLR2JP52435 117 aaKnown RBP9.55□□□□□ -0.88
LIG3-216ENST00000593099 RAB8AP61006 207 aa9.55□□□□□ -0.88
LIG3-216ENST00000593099 RACK1P63244 317 aaKnown RBP9.55□□□□□ -0.88
LIG3-216ENST00000593099 PUDPQ08623 228 aa9.55□□□□□ -0.88
LIG3-216ENST00000593099 RALGDSQ12967 914 aa9.55□□□□□ -0.88
LIG3-216ENST00000593099 TRIM61Q5EBN2 209 aa9.55□□□□□ -0.88
LIG3-216ENST00000593099 LIX1Q8N485 282 aa9.55□□□□□ -0.88
LIG3-216ENST00000593099 CPSF7Q8N684 471 aaKnown RBP9.55□□□□□ -0.88
LIG3-216ENST00000593099 GPR150Q8NGU9 434 aa9.55□□□□□ -0.88
LIG3-216ENST00000593099 WDR48Q8TAF3 677 aa9.55□□□□□ -0.88
LIG3-216ENST00000593099 IL17FQ96PD4 163 aa9.55□□□□□ -0.88
LIG3-216ENST00000593099 GAL3ST4Q96RP7 486 aa9.55□□□□□ -0.88
LIG3-216ENST00000593099 GINS4Q9BRT9 223 aa9.55□□□□□ -0.88
LIG3-216ENST00000593099 BTBD10Q9BSF8 475 aa9.55□□□□□ -0.88
LIG3-216ENST00000593099 CLCA3PQ9Y6N3 262 aa9.55□□□□□ -0.88
LIG3-216ENST00000593099 PRSS38A1L453 326 aa9.55□□□□□ -0.88
LIG3-216ENST00000593099 BBIP1A8MTZ0 92 aa9.55□□□□□ -0.88
LIG3-216ENST00000593099 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.55□□□□□ -0.88
LIG3-216ENST00000593099 NRP2O60462 931 aa9.55□□□□□ -0.88
LIG3-216ENST00000593099 B3GALNT1O75752 331 aa9.55□□□□□ -0.88
LIG3-216ENST00000593099 CBX6O95503 412 aa9.55□□□□□ -0.88
LIG3-216ENST00000593099 CSNK2A2P19784 350 aaPredicted RBP9.55□□□□□ -0.88
LIG3-216ENST00000593099 FDXRP22570 491 aa9.55□□□□□ -0.88
LIG3-216ENST00000593099 MASP1P48740 699 aa9.55□□□□□ -0.88
LIG3-216ENST00000593099 SRSF11Q05519 484 aaKnown RBP9.55□□□□□ -0.88
LIG3-216ENST00000593099 SLC18A2Q05940 514 aa9.55□□□□□ -0.88
LIG3-216ENST00000593099 TRIM16LQ309B1 348 aa9.55□□□□□ -0.88
LIG3-216ENST00000593099 TRMT5Q32P41 509 aaKnown RBP9.55□□□□□ -0.88
LIG3-216ENST00000593099 SPIN4Q56A73 249 aa9.55□□□□□ -0.88
LIG3-216ENST00000593099 TBCELQ5QJ74 424 aa9.55□□□□□ -0.88
LIG3-216ENST00000593099 OTUD1Q5VV17 481 aaPredicted RBP9.55□□□□□ -0.88
LIG3-216ENST00000593099 ADIPOR2Q86V24 386 aa9.55□□□□□ -0.88
LIG3-216ENST00000593099 PGBD5Q8N414 524 aa9.55□□□□□ -0.88
LIG3-216ENST00000593099 RHEBL1Q8TAI7 183 aa9.55□□□□□ -0.88
LIG3-216ENST00000593099 XAGE5Q8WWM1 108 aa9.55□□□□□ -0.88
LIG3-216ENST00000593099 JPH3Q8WXH2 748 aaPredicted RBP9.55□□□□□ -0.88
LIG3-216ENST00000593099 SLC9A6Q92581 669 aa9.55□□□□□ -0.88
LIG3-216ENST00000593099 MR1Q95460 341 aa9.55□□□□□ -0.88
LIG3-216ENST00000593099 PTCD3Q96EY7 689 aaKnown RBP9.55□□□□□ -0.88
LIG3-216ENST00000593099 TIMM29Q9BSF4 260 aa9.55□□□□□ -0.88
LIG3-216ENST00000593099 NOL6Q9H6R4 1146 aaKnown RBP9.55□□□□□ -0.88
LIG3-216ENST00000593099 MBD2Q9UBB5 411 aa9.55□□□□□ -0.88
LIG3-216ENST00000593099 INTS6Q9UL03 887 aaKnown RBP9.55□□□□□ -0.88
LIG3-216ENST00000593099 OARD1Q9Y530 152 aa9.55□□□□□ -0.88
LIG3-216ENST00000593099 AK5Q9Y6K8 562 aa9.55□□□□□ -0.88
LIG3-216ENST00000593099 GREB1LQ9C091 1923 aaPredicted RBP9.54□□□□□ -0.88
LIG3-216ENST00000593099 ZNFX1Q9P2E3 1918 aaKnown RBP9.54□□□□□ -0.88
LIG3-216ENST00000593099 PSME4Q14997 1843 aa9.54□□□□□ -0.88
LIG3-216ENST00000593099 SNTNA6NMZ2 147 aa9.54□□□□□ -0.88
LIG3-216ENST00000593099 C1SP09871 688 aa9.54□□□□□ -0.88
LIG3-216ENST00000593099 PRSS56P0CW18 603 aa9.54□□□□□ -0.88
LIG3-216ENST00000593099 DRD4P21917 467 aa9.54□□□□□ -0.88
LIG3-216ENST00000593099 SLC6A2P23975 617 aa9.54□□□□□ -0.88
LIG3-216ENST00000593099 IFNGR2P38484 337 aa9.54□□□□□ -0.88
LIG3-216ENST00000593099 MMP12P39900 470 aa9.54□□□□□ -0.88
LIG3-216ENST00000593099 LRRC36Q1X8D7 754 aa9.54□□□□□ -0.88
LIG3-216ENST00000593099 DPY19L1Q2PZI1 675 aa9.54□□□□□ -0.88
LIG3-216ENST00000593099 FBXW10Q5XX13 1052 aa9.54□□□□□ -0.88
LIG3-216ENST00000593099 GLB1L3Q8NCI6 653 aaPredicted RBP9.54□□□□□ -0.88
LIG3-216ENST00000593099 ACVR1CQ8NER5 493 aa9.54□□□□□ -0.88
LIG3-216ENST00000593099 OR4F6Q8NGB9 312 aa9.54□□□□□ -0.88
LIG3-216ENST00000593099 OR6C4Q8NGE1 309 aa9.54□□□□□ -0.88
LIG3-216ENST00000593099 PRRG3Q9BZD7 231 aa9.54□□□□□ -0.88
LIG3-216ENST00000593099 RSPH9Q9H1X1 276 aaPredicted RBP9.54□□□□□ -0.88
LIG3-216ENST00000593099 C19orf25Q9UFG5 118 aaPredicted RBP9.54□□□□□ -0.88
LIG3-216ENST00000593099 RPS6KA6Q9UK32 745 aa9.54□□□□□ -0.88
LIG3-216ENST00000593099 RARRES3Q9UL19 164 aa9.54□□□□□ -0.88
LIG3-216ENST00000593099 SLC9A8Q9Y2E8 581 aa9.54□□□□□ -0.88
LIG3-216ENST00000593099 SNX13Q9Y5W8 968 aa9.54□□□□□ -0.88
LIG3-216ENST00000593099 TAF4O00268 1085 aa9.54□□□□□ -0.88
LIG3-216ENST00000593099 YKT6O15498 198 aa9.54□□□□□ -0.88
LIG3-216ENST00000593099 PDPK1O15530 556 aa9.54□□□□□ -0.88
LIG3-216ENST00000593099 TBX10O75333 385 aa9.54□□□□□ -0.88
LIG3-216ENST00000593099 OLFM2O95897 454 aa9.54□□□□□ -0.88
LIG3-216ENST00000593099 ALBP02768 609 aa9.54□□□□□ -0.88
LIG3-216ENST00000593099 ATXN1LP0C7T5 689 aaKnown RBP9.54□□□□□ -0.88
LIG3-216ENST00000593099 NQO1P15559 274 aaKnown RBP9.54□□□□□ -0.88
LIG3-216ENST00000593099 HMGCS1Q01581 520 aa9.54□□□□□ -0.88
LIG3-216ENST00000593099 TMEM52BQ4KMG9 183 aa9.54□□□□□ -0.88
LIG3-216ENST00000593099 FGD3Q5JSP0 725 aa9.54□□□□□ -0.88
LIG3-216ENST00000593099 P3H2Q8IVL5 708 aa9.54□□□□□ -0.88
LIG3-216ENST00000593099 IL22RA1Q8N6P7 574 aa9.54□□□□□ -0.88
LIG3-216ENST00000593099 ATG16L2Q8NAA4 619 aa9.54□□□□□ -0.88
LIG3-216ENST00000593099 DPH7Q9BTV6 452 aa9.54□□□□□ -0.88
LIG3-216ENST00000593099 SLC6A17Q9H1V8 727 aa9.54□□□□□ -0.88
LIG3-216ENST00000593099 POLR1BQ9H9Y6 1135 aa9.54□□□□□ -0.88
LIG3-216ENST00000593099 MUTYHQ9UIF7 546 aa9.54□□□□□ -0.88
LIG3-216ENST00000593099 CA5BQ9Y2D0 317 aa9.54□□□□□ -0.88
LIG3-216ENST00000593099 MYH15Q9Y2K3 1946 aa9.54□□□□□ -0.88
LIG3-216ENST00000593099 CHRNGP07510 517 aa9.54□□□□□ -0.88
LIG3-216ENST00000593099 C1GALT1C1LP0DN25 315 aa9.54□□□□□ -0.88
LIG3-216ENST00000593099 CD1DP15813 335 aa9.54□□□□□ -0.88
LIG3-216ENST00000593099 ITPKBP27987 946 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms