RNA–Protein interactions for RNA: ENST00000592822.1

TPM4-216, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-216ENST00000592822 TMEM79Q9BSE2 394 aa9.55□□□□□ -0.88
TPM4-216ENST00000592822 HAUS8Q9BT25 410 aa9.55□□□□□ -0.88
TPM4-216ENST00000592822 ASPSCR1Q9BZE9 553 aa9.55□□□□□ -0.88
TPM4-216ENST00000592822 B3GNT4Q9C0J1 378 aa9.55□□□□□ -0.88
TPM4-216ENST00000592822 CCDC86Q9H6F5 360 aaKnown RBP9.55□□□□□ -0.88
TPM4-216ENST00000592822 TMEM216Q9P0N5 145 aa9.55□□□□□ -0.88
TPM4-216ENST00000592822 PILRAQ9UKJ1 303 aa9.55□□□□□ -0.88
TPM4-216ENST00000592822 SNX7Q9UNH6 387 aa9.55□□□□□ -0.88
TPM4-216ENST00000592822 SLC22A14Q9Y267 594 aa9.55□□□□□ -0.88
TPM4-216ENST00000592822 SDK2Q58EX2 2172 aa9.55□□□□□ -0.88
TPM4-216ENST00000592822 MDC1Q14676 2089 aaKnown RBP9.55□□□□□ -0.88
TPM4-216ENST00000592822 APC2O95996 2303 aa9.54□□□□□ -0.88
TPM4-216ENST00000592822 SYCE1LA8MT33 242 aa9.54□□□□□ -0.88
TPM4-216ENST00000592822 H3BMH7 237 aa9.54□□□□□ -0.88
TPM4-216ENST00000592822 H7BY64 318 aa9.54□□□□□ -0.88
TPM4-216ENST00000592822 TK2O00142 265 aa9.54□□□□□ -0.88
TPM4-216ENST00000592822 KLK8O60259 260 aa9.54□□□□□ -0.88
TPM4-216ENST00000592822 WDR47O94967 919 aa9.54□□□□□ -0.88
TPM4-216ENST00000592822 TIAF1O95411 115 aa9.54□□□□□ -0.88
TPM4-216ENST00000592822 S100BP04271 92 aaPredicted RBP9.54□□□□□ -0.88
TPM4-216ENST00000592822 RBP1P09455 135 aa9.54□□□□□ -0.88
TPM4-216ENST00000592822 ZNF28P17035 718 aa9.54□□□□□ -0.88
TPM4-216ENST00000592822 HSPA7P48741 367 aa9.54□□□□□ -0.88
TPM4-216ENST00000592822 TBC1D25Q3MII6 688 aa9.54□□□□□ -0.88
TPM4-216ENST00000592822 TMEM164Q5U3C3 297 aa9.54□□□□□ -0.88
TPM4-216ENST00000592822 PWWP2BQ6NUJ5 590 aa9.54□□□□□ -0.88
TPM4-216ENST00000592822 C16orf46Q6P387 395 aa9.54□□□□□ -0.88
TPM4-216ENST00000592822 FBXO42Q6P3S6 717 aa9.54□□□□□ -0.88
TPM4-216ENST00000592822 TRABD2AQ86V40 505 aa9.54□□□□□ -0.88
TPM4-216ENST00000592822 LCA5Q86VQ0 697 aa9.54□□□□□ -0.88
TPM4-216ENST00000592822 BPHLQ86WA6 291 aaPredicted RBP9.54□□□□□ -0.88
TPM4-216ENST00000592822 MCATQ8IVS2 390 aaKnown RBP9.54□□□□□ -0.88
TPM4-216ENST00000592822 NEIL2Q969S2 332 aa9.54□□□□□ -0.88
TPM4-216ENST00000592822 RNF31Q96EP0 1072 aa9.54□□□□□ -0.88
TPM4-216ENST00000592822 SCYL1Q96KG9 808 aa9.54□□□□□ -0.88
TPM4-216ENST00000592822 ZNF578Q96N58 590 aaPredicted RBP9.54□□□□□ -0.88
TPM4-216ENST00000592822 TSNARE1Q96NA8 513 aa9.54□□□□□ -0.88
TPM4-216ENST00000592822 PRAP1Q96NZ9 151 aa9.54□□□□□ -0.88
TPM4-216ENST00000592822 ZIM3Q96PE6 472 aa9.54□□□□□ -0.88
TPM4-216ENST00000592822 FCRL4Q96PJ5 515 aa9.54□□□□□ -0.88
TPM4-216ENST00000592822 MRPL57Q9BQC6 102 aaKnown RBP9.54□□□□□ -0.88
TPM4-216ENST00000592822 SPRY4Q9C004 299 aa9.54□□□□□ -0.88
TPM4-216ENST00000592822 MRPL46Q9H2W6 279 aaKnown RBP9.54□□□□□ -0.88
TPM4-216ENST00000592822 SYNPO2LQ9H987 977 aa9.54□□□□□ -0.88
TPM4-216ENST00000592822 THSD1Q9NS62 852 aa9.54□□□□□ -0.88
TPM4-216ENST00000592822 WWOXQ9NZC7 414 aa9.54□□□□□ -0.88
TPM4-216ENST00000592822 CPSF2Q9P2I0 782 aaKnown RBP9.54□□□□□ -0.88
TPM4-216ENST00000592822 ANKMY1Q9P2S6 941 aa9.54□□□□□ -0.88
TPM4-216ENST00000592822 XPR1Q9UBH6 696 aa9.54□□□□□ -0.88
TPM4-216ENST00000592822 DCDC2Q9UHG0 476 aa9.54□□□□□ -0.88
TPM4-216ENST00000592822 RARRES3Q9UL19 164 aa9.54□□□□□ -0.88
TPM4-216ENST00000592822 EMCNQ9ULC0 261 aa9.54□□□□□ -0.88
TPM4-216ENST00000592822 PLCL2Q9UPR0 1127 aa9.54□□□□□ -0.88
TPM4-216ENST00000592822 ASB1Q9Y576 335 aa9.54□□□□□ -0.88
TPM4-216ENST00000592822 ACACBO00763 2458 aa9.54□□□□□ -0.88
TPM4-216ENST00000592822 LOC105369274A0A096LPK9 316 aa9.53□□□□□ -0.88
TPM4-216ENST00000592822 LOC102723532A0A0G2JNH3 316 aa9.53□□□□□ -0.88
TPM4-216ENST00000592822 A0A0J9YVX5 310 aa9.53□□□□□ -0.88
TPM4-216ENST00000592822 LRRC14BA6NHZ5 514 aa9.53□□□□□ -0.88
TPM4-216ENST00000592822 TMEM150CB9EJG8 249 aa9.53□□□□□ -0.88
TPM4-216ENST00000592822 HAT1O14929 419 aa9.53□□□□□ -0.88
TPM4-216ENST00000592822 TLX3O43711 291 aaPredicted RBP9.53□□□□□ -0.88
TPM4-216ENST00000592822 STK16O75716 305 aa9.53□□□□□ -0.88
TPM4-216ENST00000592822 IPO13O94829 963 aaKnown RBP9.53□□□□□ -0.88
TPM4-216ENST00000592822 GSTA1P08263 222 aa9.53□□□□□ -0.88
TPM4-216ENST00000592822 CDH1P12830 882 aa9.53□□□□□ -0.88
TPM4-216ENST00000592822 H2AFXP16104 143 aaPredicted RBP9.53□□□□□ -0.88
TPM4-216ENST00000592822 KRT4P19013 534 aa9.53□□□□□ -0.88
TPM4-216ENST00000592822 EPORP19235 508 aa9.53□□□□□ -0.88
TPM4-216ENST00000592822 HRH2P25021 359 aa9.53□□□□□ -0.88
TPM4-216ENST00000592822 CRHR1P34998 444 aa9.53□□□□□ -0.88
TPM4-216ENST00000592822 ALDH18A1P54886 795 aaKnown RBP9.53□□□□□ -0.88
TPM4-216ENST00000592822 CSNK1G2P78368 415 aa9.53□□□□□ -0.88
TPM4-216ENST00000592822 RELAQ04206 551 aa9.53□□□□□ -0.88
TPM4-216ENST00000592822 SLC18A2Q05940 514 aa9.53□□□□□ -0.88
TPM4-216ENST00000592822 NAA25Q14CX7 972 aa9.53□□□□□ -0.88
TPM4-216ENST00000592822 SETDB1Q15047 1291 aa9.53□□□□□ -0.88
TPM4-216ENST00000592822 PFKFB4Q16877 469 aa9.53□□□□□ -0.88
TPM4-216ENST00000592822 KRT71Q3SY84 523 aa9.53□□□□□ -0.88
TPM4-216ENST00000592822 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.53□□□□□ -0.88
TPM4-216ENST00000592822 ZC3H12BQ5HYM0 836 aaKnown RBP9.53□□□□□ -0.88
TPM4-216ENST00000592822 CATSPEREQ5SY80 951 aa9.53□□□□□ -0.88
TPM4-216ENST00000592822 PRAMEF17Q5VTA0 474 aa9.53□□□□□ -0.88
TPM4-216ENST00000592822 FRMPD2BQ6IN97 320 aa9.53□□□□□ -0.88
TPM4-216ENST00000592822 CYB5D1Q6P9G0 228 aa9.53□□□□□ -0.88
TPM4-216ENST00000592822 LRIG3Q6UXM1 1119 aa9.53□□□□□ -0.88
TPM4-216ENST00000592822 RNF44Q7L0R7 432 aa9.53□□□□□ -0.88
TPM4-216ENST00000592822 C17orf64Q86WR6 236 aa9.53□□□□□ -0.88
TPM4-216ENST00000592822 ZFAND4Q86XD8 727 aa9.53□□□□□ -0.88
TPM4-216ENST00000592822 PPP1R3BQ86XI6 285 aa9.53□□□□□ -0.88
TPM4-216ENST00000592822 PLD3Q8IV08 490 aa9.53□□□□□ -0.88
TPM4-216ENST00000592822 OR4N4Q8N0Y3 316 aa9.53□□□□□ -0.88
TPM4-216ENST00000592822 C4orf33Q8N1A6 199 aa9.53□□□□□ -0.88
TPM4-216ENST00000592822 ABHD11Q8NFV4 315 aa9.53□□□□□ -0.88
TPM4-216ENST00000592822 OR4K1Q8NGD4 311 aa9.53□□□□□ -0.88
TPM4-216ENST00000592822 OR8K5Q8NH50 307 aa9.53□□□□□ -0.88
TPM4-216ENST00000592822 UBTD2Q8WUN7 234 aa9.53□□□□□ -0.88
TPM4-216ENST00000592822 SLC5A11Q8WWX8 675 aa9.53□□□□□ -0.88
TPM4-216ENST00000592822 ZBTB9Q96C00 473 aa9.53□□□□□ -0.88
TPM4-216ENST00000592822 ZNF285Q96NJ3 590 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms