RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 ZNF425Q6IV72 752 aa18.23■□□□□ 0.51
CLPTM1-209ENST00000588855 EXOC3L1Q86VI1 746 aa18.23■□□□□ 0.51
CLPTM1-209ENST00000588855 PAQR7Q86WK9 346 aa18.23■□□□□ 0.51
CLPTM1-209ENST00000588855 NEIL2Q969S2 332 aa18.23■□□□□ 0.51
CLPTM1-209ENST00000588855 PMEPA1Q969W9 287 aa18.23■□□□□ 0.51
CLPTM1-209ENST00000588855 ZUFSPQ96AP4 578 aa18.23■□□□□ 0.51
CLPTM1-209ENST00000588855 OR6C1Q96RD1 312 aa18.23■□□□□ 0.51
CLPTM1-209ENST00000588855 CD244Q9BZW8 370 aa18.23■□□□□ 0.51
CLPTM1-209ENST00000588855 NRSN2Q9GZP1 204 aa18.23■□□□□ 0.51
CLPTM1-209ENST00000588855 APMAPQ9HDC9 416 aa18.23■□□□□ 0.51
CLPTM1-209ENST00000588855 SENP1Q9P0U3 644 aa18.23■□□□□ 0.51
CLPTM1-209ENST00000588855 DYRK1BQ9Y463 629 aa18.23■□□□□ 0.51
CLPTM1-209ENST00000588855 PCDHGA8Q9Y5G5 932 aa18.23■□□□□ 0.51
CLPTM1-209ENST00000588855 OR2A25A4D2G3 310 aa18.22■□□□□ 0.51
CLPTM1-209ENST00000588855 TRABD2BA6NFA1 517 aa18.22■□□□□ 0.51
CLPTM1-209ENST00000588855 A8MT66 165 aa18.22■□□□□ 0.51
CLPTM1-209ENST00000588855 B4E171 279 aa18.22■□□□□ 0.51
CLPTM1-209ENST00000588855 H7BY64 318 aa18.22■□□□□ 0.51
CLPTM1-209ENST00000588855 HCRTR1O43613 425 aa18.22■□□□□ 0.51
CLPTM1-209ENST00000588855 PLIN3O60664 434 aa18.22■□□□□ 0.51
CLPTM1-209ENST00000588855 CTSVO60911 334 aa18.22■□□□□ 0.51
CLPTM1-209ENST00000588855 SIX3O95343 332 aaPredicted RBP18.22■□□□□ 0.51
CLPTM1-209ENST00000588855 TSPAN7P41732 249 aa18.22■□□□□ 0.51
CLPTM1-209ENST00000588855 GABRA4P48169 554 aa18.22■□□□□ 0.51
CLPTM1-209ENST00000588855 SHC2P98077 582 aa18.22■□□□□ 0.51
CLPTM1-209ENST00000588855 MC2RQ01718 297 aa18.22■□□□□ 0.51
CLPTM1-209ENST00000588855 FOXM1Q08050 763 aa18.22■□□□□ 0.51
CLPTM1-209ENST00000588855 CDC16Q13042 620 aa18.22■□□□□ 0.51
CLPTM1-209ENST00000588855 TUBB3Q13509 450 aa18.22■□□□□ 0.51
CLPTM1-209ENST00000588855 NAA25Q14CX7 972 aa18.22■□□□□ 0.51
CLPTM1-209ENST00000588855 LRRC70Q7Z2Q7 622 aa18.22■□□□□ 0.51
CLPTM1-209ENST00000588855 ADCK2Q7Z695 626 aa18.22■□□□□ 0.51
CLPTM1-209ENST00000588855 PRAP1Q96NZ9 151 aa18.22■□□□□ 0.51
CLPTM1-209ENST00000588855 CTRCQ99895 268 aa18.22■□□□□ 0.51
CLPTM1-209ENST00000588855 PLCD4Q9BRC7 762 aa18.22■□□□□ 0.51
CLPTM1-209ENST00000588855 CHRNA10Q9GZZ6 450 aa18.22■□□□□ 0.51
CLPTM1-209ENST00000588855 TMBIM4Q9HC24 238 aa18.22■□□□□ 0.51
CLPTM1-209ENST00000588855 DNAJC11Q9NVH1 559 aa18.22■□□□□ 0.51
CLPTM1-209ENST00000588855 ANKMY1Q9P2S6 941 aa18.22■□□□□ 0.51
CLPTM1-209ENST00000588855 ANGPTL2Q9UKU9 493 aa18.22■□□□□ 0.51
CLPTM1-209ENST00000588855 TMCO1Q9UM00 188 aa18.22■□□□□ 0.51
CLPTM1-209ENST00000588855 SPTBP11277 2137 aa18.21■□□□□ 0.51
CLPTM1-209ENST00000588855 GOLGA6L10A6NI86 522 aa18.21■□□□□ 0.51
CLPTM1-209ENST00000588855 E7EQ34 232 aa18.21■□□□□ 0.51
CLPTM1-209ENST00000588855 MAP3K7O43318 606 aa18.21■□□□□ 0.51
CLPTM1-209ENST00000588855 TNFSF15O95150 251 aa18.21■□□□□ 0.51
CLPTM1-209ENST00000588855 ACY1Q03154 408 aa18.21■□□□□ 0.51
CLPTM1-209ENST00000588855 RTP5Q14D33 572 aa18.21■□□□□ 0.51
CLPTM1-209ENST00000588855 CCDC153Q494R4 210 aa18.21■□□□□ 0.51
CLPTM1-209ENST00000588855 CATSPEREQ5SY80 951 aa18.21■□□□□ 0.51
CLPTM1-209ENST00000588855 DNAJC22Q8N4W6 341 aa18.21■□□□□ 0.51
CLPTM1-209ENST00000588855 SNX31Q8N9S9 440 aa18.21■□□□□ 0.51
CLPTM1-209ENST00000588855 SLC5A11Q8WWX8 675 aa18.21■□□□□ 0.51
CLPTM1-209ENST00000588855 NXPE2Q96DL1 559 aa18.21■□□□□ 0.51
CLPTM1-209ENST00000588855 FCRL4Q96PJ5 515 aa18.21■□□□□ 0.51
CLPTM1-209ENST00000588855 IQCGQ9H095 443 aaKnown RBP18.21■□□□□ 0.51
CLPTM1-209ENST00000588855 VIPAS39Q9H9C1 493 aa18.21■□□□□ 0.51
CLPTM1-209ENST00000588855 FGF21Q9NSA1 209 aa18.21■□□□□ 0.51
CLPTM1-209ENST00000588855 SLC39A1Q9NY26 324 aa18.21■□□□□ 0.51
CLPTM1-209ENST00000588855 OPTCQ9UBM4 332 aa18.21■□□□□ 0.51
CLPTM1-209ENST00000588855 SNX7Q9UNH6 387 aa18.21■□□□□ 0.51
CLPTM1-209ENST00000588855 KCNE2Q9Y6J6 123 aa18.21■□□□□ 0.51
CLPTM1-209ENST00000588855 STX16-NPEPL1H3BU86 382 aa18.2■□□□□ 0.5
CLPTM1-209ENST00000588855 K7EPI3 171 aa18.2■□□□□ 0.5
CLPTM1-209ENST00000588855 STX16O14662 325 aa18.2■□□□□ 0.5
CLPTM1-209ENST00000588855 HAT1O14929 419 aa18.2■□□□□ 0.5
CLPTM1-209ENST00000588855 TYROBPO43914 113 aa18.2■□□□□ 0.5
CLPTM1-209ENST00000588855 DLX3O60479 287 aa18.2■□□□□ 0.5
CLPTM1-209ENST00000588855 TAC1P20366 129 aa18.2■□□□□ 0.5
CLPTM1-209ENST00000588855 EEF1DP29692 281 aaKnown RBP18.2■□□□□ 0.5
CLPTM1-209ENST00000588855 CSNK1G2P78368 415 aa18.2■□□□□ 0.5
CLPTM1-209ENST00000588855 NFKB2Q00653 900 aa18.2■□□□□ 0.5
CLPTM1-209ENST00000588855 PCBP2Q15366 365 aaKnown RBP eCLIP18.2■□□□□ 0.58e-8■■■□□ 15.4
CLPTM1-209ENST00000588855 PDK4Q16654 411 aa18.2■□□□□ 0.5
CLPTM1-209ENST00000588855 RNF44Q7L0R7 432 aa18.2■□□□□ 0.5
CLPTM1-209ENST00000588855 TMPRSS11BQ86T26 416 aa18.2■□□□□ 0.5
CLPTM1-209ENST00000588855 PLD3Q8IV08 490 aa18.2■□□□□ 0.5
CLPTM1-209ENST00000588855 ZNF501Q96CX3 271 aaPredicted RBP18.2■□□□□ 0.5
CLPTM1-209ENST00000588855 FBXO8Q9NRD0 319 aa18.2■□□□□ 0.5
CLPTM1-209ENST00000588855 TMEM184CQ9NVA4 438 aa18.2■□□□□ 0.5
CLPTM1-209ENST00000588855 SLC17A7Q9P2U7 560 aa18.2■□□□□ 0.5
CLPTM1-209ENST00000588855 PLLPQ9Y342 182 aa18.2■□□□□ 0.5
CLPTM1-209ENST00000588855 TMEM150CB9EJG8 249 aa18.19■□□□□ 0.5
CLPTM1-209ENST00000588855 G3V2L1 256 aa18.19■□□□□ 0.5
CLPTM1-209ENST00000588855 SASH3O75995 380 aa18.19■□□□□ 0.5
CLPTM1-209ENST00000588855 CTSBP07858 339 aa18.19■□□□□ 0.5
CLPTM1-209ENST00000588855 MSL3P1P0C860 447 aa18.19■□□□□ 0.5
CLPTM1-209ENST00000588855 EPORP19235 508 aa18.19■□□□□ 0.5
CLPTM1-209ENST00000588855 ATP5F1P24539 256 aaPredicted RBP18.19■□□□□ 0.5
CLPTM1-209ENST00000588855 HRH2P25021 359 aa18.19■□□□□ 0.5
CLPTM1-209ENST00000588855 RAB15P59190 212 aa18.19■□□□□ 0.5
CLPTM1-209ENST00000588855 MEF2AQ02078 507 aaPredicted RBP18.19■□□□□ 0.5
CLPTM1-209ENST00000588855 ZYG11AQ6WRX3 759 aa18.19■□□□□ 0.5
CLPTM1-209ENST00000588855 CCDC63Q8NA47 563 aa18.19■□□□□ 0.5
CLPTM1-209ENST00000588855 ABHD11Q8NFV4 315 aa18.19■□□□□ 0.5
CLPTM1-209ENST00000588855 TCP10LQ8TDR4 215 aa18.19■□□□□ 0.5
CLPTM1-209ENST00000588855 USP7Q93009 1102 aa18.19■□□□□ 0.5
CLPTM1-209ENST00000588855 FAM111AQ96PZ2 611 aa18.19■□□□□ 0.5
CLPTM1-209ENST00000588855 SPNS1Q9H2V7 528 aa18.19■□□□□ 0.5
CLPTM1-209ENST00000588855 SYNPO2LQ9H987 977 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms