RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 NEU2Q9Y3R4 380 aa13.68□□□□□ -0.22
VMP1-206ENST00000587945 PCDHGA10Q9Y5H3 936 aa13.68□□□□□ -0.22
VMP1-206ENST00000587945 A1L4Q6 167 aa13.67□□□□□ -0.22
VMP1-206ENST00000587945 MAGEB16A2A368 324 aa13.67□□□□□ -0.22
VMP1-206ENST00000587945 CBX6O95503 412 aa13.67□□□□□ -0.22
VMP1-206ENST00000587945 SLC16A8O95907 504 aa13.67□□□□□ -0.22
VMP1-206ENST00000587945 SYF2O95926 243 aaKnown RBP13.67□□□□□ -0.22
VMP1-206ENST00000587945 ZGLP1P0C6A0 271 aa13.67□□□□□ -0.22
VMP1-206ENST00000587945 MLNP12872 115 aa13.67□□□□□ -0.22
VMP1-206ENST00000587945 FBLP22087 321 aaKnown RBP13.67□□□□□ -0.22
VMP1-206ENST00000587945 MPP1Q00013 466 aa13.67□□□□□ -0.22
VMP1-206ENST00000587945 OCA2Q04671 838 aa13.67□□□□□ -0.22
VMP1-206ENST00000587945 MUM1Q2TAK8 710 aa13.67□□□□□ -0.22
VMP1-206ENST00000587945 HKDC1Q2TB90 917 aa13.67□□□□□ -0.22
VMP1-206ENST00000587945 TUBB8Q3ZCM7 444 aa13.67□□□□□ -0.22
VMP1-206ENST00000587945 C4orf17Q53FE4 359 aa13.67□□□□□ -0.22
VMP1-206ENST00000587945 PRMT9Q6P2P2 845 aa13.67□□□□□ -0.22
VMP1-206ENST00000587945 LAPTM4BQ86VI4 370 aa13.67□□□□□ -0.22
VMP1-206ENST00000587945 PAQR7Q86WK9 346 aa13.67□□□□□ -0.22
VMP1-206ENST00000587945 CSNK1A1LQ8N752 337 aa13.67□□□□□ -0.22
VMP1-206ENST00000587945 MCUQ8NE86 351 aa13.67□□□□□ -0.22
VMP1-206ENST00000587945 ZNF480Q8WV37 535 aa13.67□□□□□ -0.22
VMP1-206ENST00000587945 MIEF2Q96C03 454 aa13.67□□□□□ -0.22
VMP1-206ENST00000587945 THOC3Q96J01 351 aaKnown RBP13.67□□□□□ -0.22
VMP1-206ENST00000587945 YIPF2Q9BWQ6 316 aa13.67□□□□□ -0.22
VMP1-206ENST00000587945 XAB2Q9HCS7 855 aaKnown RBP13.67□□□□□ -0.22
VMP1-206ENST00000587945 FAM114A2Q9NRY5 505 aa13.67□□□□□ -0.22
VMP1-206ENST00000587945 ZNF282Q9UDV7 671 aaPredicted RBP13.67□□□□□ -0.22
VMP1-206ENST00000587945 PLEKHB1Q9UF11 243 aaPredicted RBP13.67□□□□□ -0.22
VMP1-206ENST00000587945 C3orf18Q9UK00 162 aa13.67□□□□□ -0.22
VMP1-206ENST00000587945 RUVBL1Q9Y265 456 aaKnown RBP13.67□□□□□ -0.22
VMP1-206ENST00000587945 VPS9D1Q9Y2B5 631 aa13.67□□□□□ -0.22
VMP1-206ENST00000587945 COPG1Q9Y678 874 aaKnown RBP13.67□□□□□ -0.22
VMP1-206ENST00000587945 MAD1L1Q9Y6D9 718 aa13.67□□□□□ -0.22
VMP1-206ENST00000587945 SNRNP200O75643 2136 aaKnown RBP13.67□□□□□ -0.22
VMP1-206ENST00000587945 STATHP02808 62 aa13.66□□□□□ -0.22
VMP1-206ENST00000587945 SLC1A2P43004 574 aa13.66□□□□□ -0.22
VMP1-206ENST00000587945 MAGEA3P43357 314 aa13.66□□□□□ -0.22
VMP1-206ENST00000587945 PRDX1Q06830 199 aaKnown RBP13.66□□□□□ -0.22
VMP1-206ENST00000587945 ARHGAP19Q14CB8 494 aa13.66□□□□□ -0.22
VMP1-206ENST00000587945 TTLL9Q3SXZ7 439 aa13.66□□□□□ -0.22
VMP1-206ENST00000587945 AGAP7PQ5VUJ5 663 aa13.66□□□□□ -0.22
VMP1-206ENST00000587945 IRAK1BP1Q5VVH5 260 aa13.66□□□□□ -0.22
VMP1-206ENST00000587945 ICE2Q659A1 982 aa13.66□□□□□ -0.22
VMP1-206ENST00000587945 ZNF425Q6IV72 752 aa13.66□□□□□ -0.22
VMP1-206ENST00000587945 CCDC137Q6PK04 289 aaKnown RBP13.66□□□□□ -0.22
VMP1-206ENST00000587945 CYHR1Q6ZMK1 362 aa13.66□□□□□ -0.22
VMP1-206ENST00000587945 PIWIL4Q7Z3Z4 852 aaKnown RBP13.66□□□□□ -0.22
VMP1-206ENST00000587945 PLD3Q8IV08 490 aa13.66□□□□□ -0.22
VMP1-206ENST00000587945 COG1Q8WTW3 980 aa13.66□□□□□ -0.22
VMP1-206ENST00000587945 ASB11Q8WXH4 323 aa13.66□□□□□ -0.22
VMP1-206ENST00000587945 PBKQ96KB5 322 aa13.66□□□□□ -0.22
VMP1-206ENST00000587945 AGAP4Q96P64 663 aa13.66□□□□□ -0.22
VMP1-206ENST00000587945 OR2A5Q96R48 311 aa13.66□□□□□ -0.22
VMP1-206ENST00000587945 GPR21Q99679 349 aa13.66□□□□□ -0.22
VMP1-206ENST00000587945 WDR77Q9BQA1 342 aaPredicted RBP13.66□□□□□ -0.22
VMP1-206ENST00000587945 LHPPQ9H008 270 aa13.66□□□□□ -0.22
VMP1-206ENST00000587945 CCDC68Q9H2F9 335 aa13.66□□□□□ -0.22
VMP1-206ENST00000587945 ZNF160Q9HCG1 818 aa13.66□□□□□ -0.22
VMP1-206ENST00000587945 C20orf96Q9NUD7 363 aaPredicted RBP13.66□□□□□ -0.22
VMP1-206ENST00000587945 NOVA2Q9UNW9 492 aaKnown RBP13.66□□□□□ -0.22
VMP1-206ENST00000587945 JRKLQ9Y4A0 524 aa13.66□□□□□ -0.22
VMP1-206ENST00000587945 SHANK1Q9Y566 2161 aa13.66□□□□□ -0.22
VMP1-206ENST00000587945 SPTAN1Q13813 2472 aaKnown RBP13.66□□□□□ -0.22
VMP1-206ENST00000587945 ANKUB1A6NFN9 424 aa13.65□□□□□ -0.22
VMP1-206ENST00000587945 E7ENX8 843 aa13.65□□□□□ -0.22
VMP1-206ENST00000587945 SMAPO00193 183 aa13.65□□□□□ -0.22
VMP1-206ENST00000587945 P2RX6O15547 441 aa13.65□□□□□ -0.22
VMP1-206ENST00000587945 VPS26AO75436 327 aa13.65□□□□□ -0.22
VMP1-206ENST00000587945 HAUS5O94927 633 aa13.65□□□□□ -0.22
VMP1-206ENST00000587945 ACPPP15309 386 aa13.65□□□□□ -0.22
VMP1-206ENST00000587945 HSD17B2P37059 387 aa13.65□□□□□ -0.22
VMP1-206ENST00000587945 CARSP49589 748 aaKnown RBP13.65□□□□□ -0.22
VMP1-206ENST00000587945 SNRPNP63162 240 aaKnown RBP13.65□□□□□ -0.22
VMP1-206ENST00000587945 TAP2Q03519 686 aa13.65□□□□□ -0.22
VMP1-206ENST00000587945 NAA25Q14CX7 972 aa13.65□□□□□ -0.22
VMP1-206ENST00000587945 CYP1B1Q16678 543 aa13.65□□□□□ -0.22
VMP1-206ENST00000587945 LONRF1Q17RB8 773 aa13.65□□□□□ -0.22
VMP1-206ENST00000587945 HSP90AA5PQ58FG0 334 aa13.65□□□□□ -0.22
VMP1-206ENST00000587945 ARMC3Q5W041 872 aa13.65□□□□□ -0.22
VMP1-206ENST00000587945 ATG9BQ674R7 924 aa13.65□□□□□ -0.22
VMP1-206ENST00000587945 IGFL2Q6UWQ7 119 aa13.65□□□□□ -0.22
VMP1-206ENST00000587945 LINC00696Q6ZRV3 163 aa13.65□□□□□ -0.22
VMP1-206ENST00000587945 NEK10Q6ZWH5 1172 aa13.65□□□□□ -0.22
VMP1-206ENST00000587945 ADCK2Q7Z695 626 aa13.65□□□□□ -0.22
VMP1-206ENST00000587945 CPNE9Q8IYJ1 553 aa13.65□□□□□ -0.22
VMP1-206ENST00000587945 AMER2Q8N7J2 671 aa13.65□□□□□ -0.22
VMP1-206ENST00000587945 NAT8LQ8N9F0 302 aa13.65□□□□□ -0.22
VMP1-206ENST00000587945 DNAJB14Q8TBM8 379 aa13.65□□□□□ -0.22
VMP1-206ENST00000587945 CD200R1Q8TD46 325 aa13.65□□□□□ -0.22
VMP1-206ENST00000587945 KCNJ9Q92806 393 aa13.65□□□□□ -0.22
VMP1-206ENST00000587945 CNDP1Q96KN2 507 aa13.65□□□□□ -0.22
VMP1-206ENST00000587945 SIGLEC10Q96LC7 697 aa13.65□□□□□ -0.22
VMP1-206ENST00000587945 CUEDC1Q9NWM3 386 aaPredicted RBP13.65□□□□□ -0.22
VMP1-206ENST00000587945 KLHL42Q9P2K6 505 aa13.65□□□□□ -0.22
VMP1-206ENST00000587945 TRPC4Q9UBN4 977 aa13.65□□□□□ -0.22
VMP1-206ENST00000587945 PCYOX1Q9UHG3 505 aa13.65□□□□□ -0.22
VMP1-206ENST00000587945 ERRFI1Q9UJM3 462 aaPredicted RBP13.65□□□□□ -0.22
VMP1-206ENST00000587945 FBXO5Q9UKT4 447 aa13.65□□□□□ -0.22
VMP1-206ENST00000587945 DHRS7Q9Y394 339 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms