RNA–Protein interactions for RNA: ENST00000585437.1

ATG4D-202, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-202ENST00000585437 YTHDF3Q7Z739 585 aaKnown RBP8.3□□□□□ -1.08
ATG4D-202ENST00000585437 LRRC56Q8IYG6 542 aaPredicted RBP8.3□□□□□ -1.08
ATG4D-202ENST00000585437 CPNE9Q8IYJ1 553 aa8.3□□□□□ -1.08
ATG4D-202ENST00000585437 OR2L3Q8NG85 312 aa8.3□□□□□ -1.08
ATG4D-202ENST00000585437 OR9A1PQ8NGU1 263 aa8.3□□□□□ -1.08
ATG4D-202ENST00000585437 GABPB2Q8TAK5 448 aaPredicted RBP8.3□□□□□ -1.08
ATG4D-202ENST00000585437 FBF1Q8TES7 1133 aa8.3□□□□□ -1.08
ATG4D-202ENST00000585437 CT55Q8WUE5 264 aa8.3□□□□□ -1.08
ATG4D-202ENST00000585437 ASB11Q8WXH4 323 aa8.3□□□□□ -1.08
ATG4D-202ENST00000585437 SLC39A7Q92504 469 aa8.3□□□□□ -1.08
ATG4D-202ENST00000585437 CDKL2Q92772 493 aa8.3□□□□□ -1.08
ATG4D-202ENST00000585437 INPP5DQ92835 1189 aa8.3□□□□□ -1.08
ATG4D-202ENST00000585437 MTBPQ96DY7 904 aa8.3□□□□□ -1.08
ATG4D-202ENST00000585437 RNF31Q96EP0 1072 aa8.3□□□□□ -1.08
ATG4D-202ENST00000585437 CFAP36Q96G28 342 aa8.3□□□□□ -1.08
ATG4D-202ENST00000585437 CATSPER2Q96P56 530 aa8.3□□□□□ -1.08
ATG4D-202ENST00000585437 NDNQ99608 321 aa8.3□□□□□ -1.08
ATG4D-202ENST00000585437 PLCD4Q9BRC7 762 aa8.3□□□□□ -1.08
ATG4D-202ENST00000585437 AKIRIN1Q9H9L7 192 aaPredicted RBP8.3□□□□□ -1.08
ATG4D-202ENST00000585437 PCMTD2Q9NV79 361 aa8.3□□□□□ -1.08
ATG4D-202ENST00000585437 TBK1Q9UHD2 729 aa8.3□□□□□ -1.08
ATG4D-202ENST00000585437 ZNF180Q9UJW8 692 aa8.3□□□□□ -1.08
ATG4D-202ENST00000585437 PADI1Q9ULC6 663 aa8.3□□□□□ -1.08
ATG4D-202ENST00000585437 MRPS18BQ9Y676 258 aaKnown RBP8.3□□□□□ -1.08
ATG4D-202ENST00000585437 FASNP49327 2511 aaKnown RBP8.3□□□□□ -1.08
ATG4D-202ENST00000585437 HELZ2Q9BYK8 2649 aaKnown RBP8.29□□□□□ -1.08
ATG4D-202ENST00000585437 OR2A25A4D2G3 310 aa8.29□□□□□ -1.08
ATG4D-202ENST00000585437 TARM1B6A8C7 271 aa8.29□□□□□ -1.08
ATG4D-202ENST00000585437 E7EQ34 232 aa8.29□□□□□ -1.08
ATG4D-202ENST00000585437 MEN1O00255 615 aa8.29□□□□□ -1.08
ATG4D-202ENST00000585437 TM9SF1O15321 606 aa8.29□□□□□ -1.08
ATG4D-202ENST00000585437 MAP3K7O43318 606 aa8.29□□□□□ -1.08
ATG4D-202ENST00000585437 ZNF749O43361 778 aa8.29□□□□□ -1.08
ATG4D-202ENST00000585437 SLC16A8O95907 504 aa8.29□□□□□ -1.08
ATG4D-202ENST00000585437 CTSBP07858 339 aa8.29□□□□□ -1.08
ATG4D-202ENST00000585437 VIMP08670 466 aaKnown RBP8.29□□□□□ -1.08
ATG4D-202ENST00000585437 FURINP09958 794 aa8.29□□□□□ -1.08
ATG4D-202ENST00000585437 RAB40ALP0C0E4 278 aa8.29□□□□□ -1.08
ATG4D-202ENST00000585437 CCNYL3P0C7X3 344 aa8.29□□□□□ -1.08
ATG4D-202ENST00000585437 TCN2P20062 427 aa8.29□□□□□ -1.08
ATG4D-202ENST00000585437 SSTR1P30872 391 aa8.29□□□□□ -1.08
ATG4D-202ENST00000585437 GRIA3P42263 894 aa8.29□□□□□ -1.08
ATG4D-202ENST00000585437 SERPINB9P50453 376 aa8.29□□□□□ -1.08
ATG4D-202ENST00000585437 SEC24CP53992 1094 aa8.29□□□□□ -1.08
ATG4D-202ENST00000585437 MC1RQ01726 317 aa8.29□□□□□ -1.08
ATG4D-202ENST00000585437 MGAT5Q09328 741 aa8.29□□□□□ -1.08
ATG4D-202ENST00000585437 SP140Q13342 867 aa8.29□□□□□ -1.08
ATG4D-202ENST00000585437 FASTKQ14296 549 aaKnown RBP8.29□□□□□ -1.08
ATG4D-202ENST00000585437 TBR1Q16650 682 aa8.29□□□□□ -1.08
ATG4D-202ENST00000585437 HP1BP3Q5SSJ5 553 aaPredicted RBP8.29□□□□□ -1.08
ATG4D-202ENST00000585437 PRAMEF17Q5VTA0 474 aa8.29□□□□□ -1.08
ATG4D-202ENST00000585437 FAM45BPQ6NSW5 357 aa8.29□□□□□ -1.08
ATG4D-202ENST00000585437 RHBDD2Q6NTF9 364 aa8.29□□□□□ -1.08
ATG4D-202ENST00000585437 FAM199XQ6PEV8 388 aaPredicted RBP8.29□□□□□ -1.08
ATG4D-202ENST00000585437 CAPN12Q6ZSI9 719 aa8.29□□□□□ -1.08
ATG4D-202ENST00000585437 RNF44Q7L0R7 432 aa8.29□□□□□ -1.08
ATG4D-202ENST00000585437 PIWIL4Q7Z3Z4 852 aaKnown RBP8.29□□□□□ -1.08
ATG4D-202ENST00000585437 TAX1BP1Q86VP1 789 aa8.29□□□□□ -1.08
ATG4D-202ENST00000585437 SLC26A11Q86WA9 606 aa8.29□□□□□ -1.08
ATG4D-202ENST00000585437 FAM20CQ8IXL6 584 aa8.29□□□□□ -1.08
ATG4D-202ENST00000585437 SYTL1Q8IYJ3 562 aa8.29□□□□□ -1.08
ATG4D-202ENST00000585437 RAB42Q8N4Z0 105 aa8.29□□□□□ -1.08
ATG4D-202ENST00000585437 ANKRD42Q8N9B4 389 aa8.29□□□□□ -1.08
ATG4D-202ENST00000585437 CCDC197Q8NCU1 140 aa8.29□□□□□ -1.08
ATG4D-202ENST00000585437 FAM45AQ8TCE6 357 aa8.29□□□□□ -1.08
ATG4D-202ENST00000585437 ZNF480Q8WV37 535 aa8.29□□□□□ -1.08
ATG4D-202ENST00000585437 SKA2Q8WVK7 121 aaPredicted RBP8.29□□□□□ -1.08
ATG4D-202ENST00000585437 SLC44A1Q8WWI5 657 aa8.29□□□□□ -1.08
ATG4D-202ENST00000585437 CKAP2Q8WWK9 683 aa8.29□□□□□ -1.08
ATG4D-202ENST00000585437 DLG3Q92796 817 aa8.29□□□□□ -1.08
ATG4D-202ENST00000585437 EXTL1Q92935 676 aa8.29□□□□□ -1.08
ATG4D-202ENST00000585437 ZUFSPQ96AP4 578 aa8.29□□□□□ -1.08
ATG4D-202ENST00000585437 MAGEB18Q96M61 343 aa8.29□□□□□ -1.08
ATG4D-202ENST00000585437 ZNF317Q96PQ6 595 aaPredicted RBP8.29□□□□□ -1.08
ATG4D-202ENST00000585437 OLFM1Q99784 485 aa8.29□□□□□ -1.08
ATG4D-202ENST00000585437 DPH2Q9BQC3 489 aaPredicted RBP8.29□□□□□ -1.08
ATG4D-202ENST00000585437 GPR87Q9BY21 358 aa8.29□□□□□ -1.08
ATG4D-202ENST00000585437 SEMA4CQ9C0C4 833 aa8.29□□□□□ -1.08
ATG4D-202ENST00000585437 ACTL8Q9H568 366 aa8.29□□□□□ -1.08
ATG4D-202ENST00000585437 ACTR5Q9H9F9 607 aaPredicted RBP8.29□□□□□ -1.08
ATG4D-202ENST00000585437 SLC6A20Q9NP91 592 aa8.29□□□□□ -1.08
ATG4D-202ENST00000585437 SMYD2Q9NRG4 433 aa8.29□□□□□ -1.08
ATG4D-202ENST00000585437 TAS2R13Q9NYV9 303 aa8.29□□□□□ -1.08
ATG4D-202ENST00000585437 ANKMY1Q9P2S6 941 aa8.29□□□□□ -1.08
ATG4D-202ENST00000585437 TRMT6Q9UJA5 497 aaKnown RBP8.29□□□□□ -1.08
ATG4D-202ENST00000585437 SERTAD3Q9UJW9 196 aa8.29□□□□□ -1.08
ATG4D-202ENST00000585437 KCND3Q9UK17 655 aa8.29□□□□□ -1.08
ATG4D-202ENST00000585437 SLC39A10Q9ULF5 831 aa8.29□□□□□ -1.08
ATG4D-202ENST00000585437 PSAT1Q9Y617 370 aa8.29□□□□□ -1.08
ATG4D-202ENST00000585437 AP1M2Q9Y6Q5 423 aa8.29□□□□□ -1.08
ATG4D-202ENST00000585437 MED13Q9UHV7 2174 aa8.28□□□□□ -1.08
ATG4D-202ENST00000585437 IGKV1-8A0A0C4DH67 115 aa8.28□□□□□ -1.08
ATG4D-202ENST00000585437 FITM1A5D6W6 292 aa8.28□□□□□ -1.08
ATG4D-202ENST00000585437 E7ENX8 843 aa8.28□□□□□ -1.08
ATG4D-202ENST00000585437 NKX2-8O15522 239 aa8.28□□□□□ -1.08
ATG4D-202ENST00000585437 ZSCAN9O15535 394 aaPredicted RBP8.28□□□□□ -1.08
ATG4D-202ENST00000585437 NRP2O60462 931 aa8.28□□□□□ -1.08
ATG4D-202ENST00000585437 CTSVO60911 334 aa8.28□□□□□ -1.08
ATG4D-202ENST00000585437 CREG1O75629 220 aa8.28□□□□□ -1.08
ATG4D-202ENST00000585437 FAM155BO75949 473 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms