RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 FASTKD3Q14CZ7 662 aaKnown RBP2.71□□□□□ -1.98
SMCHD1-206ENST00000581631 ZNF74Q16587 644 aa2.71□□□□□ -1.98
SMCHD1-206ENST00000581631 PHKG1Q16816 387 aa2.71□□□□□ -1.98
SMCHD1-206ENST00000581631 LETM2Q2VYF4 491 aa2.71□□□□□ -1.98
SMCHD1-206ENST00000581631 LYSMD4Q5XG99 296 aa2.71□□□□□ -1.98
SMCHD1-206ENST00000581631 PRR27Q6MZM9 219 aa2.71□□□□□ -1.98
SMCHD1-206ENST00000581631 CAMKMTQ7Z624 323 aa2.71□□□□□ -1.98
SMCHD1-206ENST00000581631 HPS6Q86YV9 775 aa2.71□□□□□ -1.98
SMCHD1-206ENST00000581631 KLHDC1Q8N7A1 406 aa2.71□□□□□ -1.98
SMCHD1-206ENST00000581631 TSPAN14Q8NG11 270 aa2.71□□□□□ -1.98
SMCHD1-206ENST00000581631 OR4K1Q8NGD4 311 aa2.71□□□□□ -1.98
SMCHD1-206ENST00000581631 GATAD1Q8WUU5 269 aa2.71□□□□□ -1.98
SMCHD1-206ENST00000581631 SECISBP2LQ93073 1101 aaKnown RBP2.71□□□□□ -1.98
SMCHD1-206ENST00000581631 C4orf45Q96LM5 186 aa2.71□□□□□ -1.98
SMCHD1-206ENST00000581631 NKX3-1Q99801 234 aaPredicted RBP2.71□□□□□ -1.98
SMCHD1-206ENST00000581631 APOL6Q9BWW8 343 aa2.71□□□□□ -1.98
SMCHD1-206ENST00000581631 MAF1Q9H063 256 aa2.71□□□□□ -1.98
SMCHD1-206ENST00000581631 ANKZF1Q9H8Y5 726 aa2.71□□□□□ -1.98
SMCHD1-206ENST00000581631 CNOT10Q9H9A5 744 aaKnown RBP2.71□□□□□ -1.98
SMCHD1-206ENST00000581631 TEX10Q9NXF1 929 aaPredicted RBP2.71□□□□□ -1.98
SMCHD1-206ENST00000581631 C19orf25Q9UFG5 118 aaPredicted RBP2.71□□□□□ -1.98
SMCHD1-206ENST00000581631 DDX25Q9UHL0 483 aaKnown RBP2.71□□□□□ -1.98
SMCHD1-206ENST00000581631 WDR83OSQ9Y284 106 aa2.71□□□□□ -1.98
SMCHD1-206ENST00000581631 RPS6KL1Q9Y6S9 549 aa2.71□□□□□ -1.98
SMCHD1-206ENST00000581631 R4GN57 208 aa2.71□□□□□ -1.98
SMCHD1-206ENST00000581631 TRIM77I1YAP6 450 aa2.7□□□□□ -1.98
SMCHD1-206ENST00000581631 ERAL1O75616 437 aaKnown RBP2.7□□□□□ -1.98
SMCHD1-206ENST00000581631 C22orf31O95567 290 aa2.7□□□□□ -1.98
SMCHD1-206ENST00000581631 ACSL3O95573 720 aa2.7□□□□□ -1.98
SMCHD1-206ENST00000581631 IGHEP01854 428 aa2.7□□□□□ -1.98
SMCHD1-206ENST00000581631 IRF2P14316 349 aa2.7□□□□□ -1.98
SMCHD1-206ENST00000581631 CD27P26842 260 aa2.7□□□□□ -1.98
SMCHD1-206ENST00000581631 XGP55808 180 aa2.7□□□□□ -1.98
SMCHD1-206ENST00000581631 CYCSP99999 105 aaKnown RBP2.7□□□□□ -1.98
SMCHD1-206ENST00000581631 KLC1Q07866 573 aa2.7□□□□□ -1.98
SMCHD1-206ENST00000581631 PRKG2Q13237 762 aa2.7□□□□□ -1.98
SMCHD1-206ENST00000581631 EXT1Q16394 746 aa2.7□□□□□ -1.98
SMCHD1-206ENST00000581631 MOGAT2Q3SYC2 334 aa2.7□□□□□ -1.98
SMCHD1-206ENST00000581631 RNF212Q495C1 297 aa2.7□□□□□ -1.98
SMCHD1-206ENST00000581631 GARNL3Q5VVW2 1013 aa2.7□□□□□ -1.98
SMCHD1-206ENST00000581631 FAM198BQ6UWH4 519 aa2.7□□□□□ -1.98
SMCHD1-206ENST00000581631 CATSPERDQ86XM0 798 aa2.7□□□□□ -1.98
SMCHD1-206ENST00000581631 TC2NQ8N9U0 490 aa2.7□□□□□ -1.98
SMCHD1-206ENST00000581631 Q8NBF4 154 aa2.7□□□□□ -1.98
SMCHD1-206ENST00000581631 AVL9Q8NBF6 648 aa2.7□□□□□ -1.98
SMCHD1-206ENST00000581631 AQP11Q8NBQ7 271 aa2.7□□□□□ -1.98
SMCHD1-206ENST00000581631 SLC37A3Q8NCC5 494 aa2.7□□□□□ -1.98
SMCHD1-206ENST00000581631 C17orf47Q8NEP4 570 aa2.7□□□□□ -1.98
SMCHD1-206ENST00000581631 OR10Q1Q8NGQ4 319 aa2.7□□□□□ -1.98
SMCHD1-206ENST00000581631 RASL10AQ92737 203 aa2.7□□□□□ -1.98
SMCHD1-206ENST00000581631 MOB3AQ96BX8 217 aa2.7□□□□□ -1.98
SMCHD1-206ENST00000581631 CYYR1Q96J86 154 aa2.7□□□□□ -1.98
SMCHD1-206ENST00000581631 FAM71F1Q96KD3 344 aaPredicted RBP2.7□□□□□ -1.98
SMCHD1-206ENST00000581631 PRICKLE1Q96MT3 831 aaPredicted RBP2.7□□□□□ -1.98
SMCHD1-206ENST00000581631 SPAG5Q96R06 1193 aa2.7□□□□□ -1.98
SMCHD1-206ENST00000581631 PANK2Q9BZ23 570 aa2.7□□□□□ -1.98
SMCHD1-206ENST00000581631 NOL11Q9H8H0 719 aaKnown RBP2.7□□□□□ -1.98
SMCHD1-206ENST00000581631 CHST11Q9NPF2 352 aa2.7□□□□□ -1.98
SMCHD1-206ENST00000581631 ABCB10Q9NRK6 738 aa2.7□□□□□ -1.98
SMCHD1-206ENST00000581631 CLIP2Q9UDT6 1046 aa2.7□□□□□ -1.98
SMCHD1-206ENST00000581631 CPSF3Q9UKF6 684 aaKnown RBP2.7□□□□□ -1.98
SMCHD1-206ENST00000581631 CSNK1G3Q9Y6M4 447 aa2.7□□□□□ -1.98
SMCHD1-206ENST00000581631 MPTX1A8MV57 137 aa2.69□□□□□ -1.98
SMCHD1-206ENST00000581631 PI4K2BG5E9Z4 385 aa2.69□□□□□ -1.98
SMCHD1-206ENST00000581631 STARD3NLO95772 234 aa2.69□□□□□ -1.98
SMCHD1-206ENST00000581631 CYP11B2P19099 503 aa2.69□□□□□ -1.98
SMCHD1-206ENST00000581631 AZGP1P25311 298 aaKnown RBP2.69□□□□□ -1.98
SMCHD1-206ENST00000581631 DNA2P51530 1060 aa2.69□□□□□ -1.98
SMCHD1-206ENST00000581631 CUL3Q13618 768 aa2.69□□□□□ -1.98
SMCHD1-206ENST00000581631 ITGA7Q13683 1181 aa2.69□□□□□ -1.98
SMCHD1-206ENST00000581631 EFTUD2Q15029 972 aaKnown RBP eCLIP2.69□□□□□ -1.982e-10■□□□□ 10
SMCHD1-206ENST00000581631 VWC2Q2TAL6 325 aa2.69□□□□□ -1.98
SMCHD1-206ENST00000581631 CES4AQ5XG92 561 aa2.69□□□□□ -1.98
SMCHD1-206ENST00000581631 KIF6Q6ZMV9 814 aa2.69□□□□□ -1.98
SMCHD1-206ENST00000581631 ZBTB49Q6ZSB9 765 aa2.69□□□□□ -1.98
SMCHD1-206ENST00000581631 SLC4A11Q8NBS3 891 aa2.69□□□□□ -1.98
SMCHD1-206ENST00000581631 NUP37Q8NFH4 326 aa2.69□□□□□ -1.98
SMCHD1-206ENST00000581631 OR7A2PQ8NGA2 310 aa2.69□□□□□ -1.98
SMCHD1-206ENST00000581631 ATP8B4Q8TF62 1192 aa2.69□□□□□ -1.98
SMCHD1-206ENST00000581631 ATL1Q8WXF7 558 aa2.69□□□□□ -1.98
SMCHD1-206ENST00000581631 LPAR4Q99677 370 aa2.69□□□□□ -1.98
SMCHD1-206ENST00000581631 PRRG4Q9BZD6 226 aa2.69□□□□□ -1.98
SMCHD1-206ENST00000581631 GPR88Q9GZN0 384 aa2.69□□□□□ -1.98
SMCHD1-206ENST00000581631 NYXQ9GZU5 481 aa2.69□□□□□ -1.98
SMCHD1-206ENST00000581631 ZMYND12Q9H0C1 365 aa2.69□□□□□ -1.98
SMCHD1-206ENST00000581631 Q9H8V8 135 aa2.69□□□□□ -1.98
SMCHD1-206ENST00000581631 MED20Q9H944 212 aa2.69□□□□□ -1.98
SMCHD1-206ENST00000581631 IL17BQ9UHF5 180 aa2.69□□□□□ -1.98
SMCHD1-206ENST00000581631 MUTYHQ9UIF7 546 aa2.69□□□□□ -1.98
SMCHD1-206ENST00000581631 TRPV2Q9Y5S1 764 aa2.69□□□□□ -1.98
SMCHD1-206ENST00000581631 FAM169AQ9Y6X4 670 aa2.69□□□□□ -1.98
SMCHD1-206ENST00000581631 A0A087WUV0 522 aaPredicted RBP2.68□□□□□ -1.98
SMCHD1-206ENST00000581631 TEX28O15482 410 aa2.68□□□□□ -1.98
SMCHD1-206ENST00000581631 SPRY1O43609 319 aaPredicted RBP2.68□□□□□ -1.98
SMCHD1-206ENST00000581631 IGHV3-13P01766 116 aa2.68□□□□□ -1.98
SMCHD1-206ENST00000581631 PRKAR1AP10644 381 aa2.68□□□□□ -1.98
SMCHD1-206ENST00000581631 RPL35AP18077 110 aaKnown RBP2.68□□□□□ -1.98
SMCHD1-206ENST00000581631 ITIH1P19827 911 aa2.68□□□□□ -1.98
SMCHD1-206ENST00000581631 CD22P20273 847 aa2.68□□□□□ -1.98
SMCHD1-206ENST00000581631 HLA-FP30511 346 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms