RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 PDE7BQ9NP56 450 aa13.76□□□□□ -0.21
SKA2-205ENST00000580541 PCTPQ9UKL6 214 aa13.76□□□□□ -0.21
SKA2-205ENST00000580541 KLK4Q9Y5K2 254 aa13.76□□□□□ -0.21
SKA2-205ENST00000580541 KNTC1P50748 2209 aa13.76□□□□□ -0.21
SKA2-205ENST00000580541 WDR91A4D1P6 747 aa13.75□□□□□ -0.21
SKA2-205ENST00000580541 D6RAR5 112 aa13.75□□□□□ -0.21
SKA2-205ENST00000580541 SERPINE1P05121 402 aa13.75□□□□□ -0.21
SKA2-205ENST00000580541 RPS17P08708 135 aaKnown RBP13.75□□□□□ -0.21
SKA2-205ENST00000580541 ANKRD34CP0C6C1 535 aa13.75□□□□□ -0.21
SKA2-205ENST00000580541 FTH1P19P0C7X4 201 aa13.75□□□□□ -0.21
SKA2-205ENST00000580541 EBLN1P0CF75 366 aa13.75□□□□□ -0.21
SKA2-205ENST00000580541 C1GALT1C1LP0DN25 315 aa13.75□□□□□ -0.21
SKA2-205ENST00000580541 CHN1P15882 459 aa13.75□□□□□ -0.21
SKA2-205ENST00000580541 HNF4AP41235 474 aa13.75□□□□□ -0.21
SKA2-205ENST00000580541 INHBCP55103 352 aa13.75□□□□□ -0.21
SKA2-205ENST00000580541 PKNOX1P55347 436 aa13.75□□□□□ -0.21
SKA2-205ENST00000580541 HSD11B2P80365 405 aa13.75□□□□□ -0.21
SKA2-205ENST00000580541 GALNT1Q10472 559 aaPredicted RBP13.75□□□□□ -0.21
SKA2-205ENST00000580541 RBBP7Q16576 425 aa13.75□□□□□ -0.21
SKA2-205ENST00000580541 C18orf21Q32NC0 220 aaPredicted RBP13.75□□□□□ -0.21
SKA2-205ENST00000580541 UNC50Q53HI1 259 aa13.75□□□□□ -0.21
SKA2-205ENST00000580541 XKR6Q5GH73 641 aa13.75□□□□□ -0.21
SKA2-205ENST00000580541 ATG9BQ674R7 924 aa13.75□□□□□ -0.21
SKA2-205ENST00000580541 NXPE4Q6UWF7 544 aa13.75□□□□□ -0.21
SKA2-205ENST00000580541 GOLGA7Q7Z5G4 137 aa13.75□□□□□ -0.21
SKA2-205ENST00000580541 ADCK2Q7Z695 626 aa13.75□□□□□ -0.21
SKA2-205ENST00000580541 MILR1Q7Z6M3 343 aa13.75□□□□□ -0.21
SKA2-205ENST00000580541 ALYREFQ86V81 257 aaKnown RBP13.75□□□□□ -0.21
SKA2-205ENST00000580541 ABHD11Q8NFV4 315 aa13.75□□□□□ -0.21
SKA2-205ENST00000580541 ZNF483Q8TF39 744 aaPredicted RBP13.75□□□□□ -0.21
SKA2-205ENST00000580541 N4BP2L2Q92802 583 aaPredicted RBP13.75□□□□□ -0.21
SKA2-205ENST00000580541 NEIL2Q969S2 332 aa13.75□□□□□ -0.21
SKA2-205ENST00000580541 REPS1Q96D71 796 aa13.75□□□□□ -0.21
SKA2-205ENST00000580541 THAP11Q96EK4 314 aa13.75□□□□□ -0.21
SKA2-205ENST00000580541 PTCD3Q96EY7 689 aaKnown RBP13.75□□□□□ -0.21
SKA2-205ENST00000580541 TMEM237Q96Q45 408 aa13.75□□□□□ -0.21
SKA2-205ENST00000580541 OR4K3Q96R72 315 aa13.75□□□□□ -0.21
SKA2-205ENST00000580541 MAP3K3Q99759 626 aa13.75□□□□□ -0.21
SKA2-205ENST00000580541 NUDT22Q9BRQ3 303 aa13.75□□□□□ -0.21
SKA2-205ENST00000580541 DPH7Q9BTV6 452 aa13.75□□□□□ -0.21
SKA2-205ENST00000580541 EFCAB11Q9BUY7 163 aa13.75□□□□□ -0.21
SKA2-205ENST00000580541 NTMT1Q9BV86 223 aa13.75□□□□□ -0.21
SKA2-205ENST00000580541 NOL11Q9H8H0 719 aaKnown RBP13.75□□□□□ -0.21
SKA2-205ENST00000580541 ACTR8Q9H981 624 aa13.75□□□□□ -0.21
SKA2-205ENST00000580541 SEMA5BQ9P283 1151 aa13.75□□□□□ -0.21
SKA2-205ENST00000580541 KLHL3Q9UH77 587 aa13.75□□□□□ -0.21
SKA2-205ENST00000580541 ATXN7L1Q9ULK2 861 aaPredicted RBP13.75□□□□□ -0.21
SKA2-205ENST00000580541 WDR87Q6ZQQ6 2873 aa13.75□□□□□ -0.21
SKA2-205ENST00000580541 ZNF292O60281 2723 aa13.75□□□□□ -0.21
SKA2-205ENST00000580541 TMEM114B3SHH9 223 aa13.74□□□□□ -0.21
SKA2-205ENST00000580541 H7BY64 318 aa13.74□□□□□ -0.21
SKA2-205ENST00000580541 HGSO14964 777 aaPredicted RBP13.74□□□□□ -0.21
SKA2-205ENST00000580541 KCNK5O95279 499 aa13.74□□□□□ -0.21
SKA2-205ENST00000580541 CLDN9O95484 217 aa13.74□□□□□ -0.21
SKA2-205ENST00000580541 HOXB3P14651 431 aaPredicted RBP13.74□□□□□ -0.21
SKA2-205ENST00000580541 GSTM2P28161 218 aa13.74□□□□□ -0.21
SKA2-205ENST00000580541 PEBP1P30086 187 aaKnown RBP13.74□□□□□ -0.21
SKA2-205ENST00000580541 CSTF2P33240 577 aaKnown RBP eCLIP13.74□□□□□ -0.21
SKA2-205ENST00000580541 GRIA3P42263 894 aa13.74□□□□□ -0.21
SKA2-205ENST00000580541 CASP2P42575 452 aa13.74□□□□□ -0.21
SKA2-205ENST00000580541 WDR4P57081 412 aaKnown RBP13.74□□□□□ -0.21
SKA2-205ENST00000580541 CFHR1Q03591 330 aa13.74□□□□□ -0.21
SKA2-205ENST00000580541 LCP2Q13094 533 aa13.74□□□□□ -0.21
SKA2-205ENST00000580541 STX3Q13277 289 aa13.74□□□□□ -0.21
SKA2-205ENST00000580541 CHI3L2Q15782 390 aa13.74□□□□□ -0.21
SKA2-205ENST00000580541 ZXDCQ2QGD7 858 aaPredicted RBP13.74□□□□□ -0.21
SKA2-205ENST00000580541 FBXO48Q5FWF7 155 aa13.74□□□□□ -0.21
SKA2-205ENST00000580541 SNAP47Q5SQN1 464 aa13.74□□□□□ -0.21
SKA2-205ENST00000580541 C10orf62Q5T681 223 aaPredicted RBP13.74□□□□□ -0.21
SKA2-205ENST00000580541 PHF19Q5T6S3 580 aa13.74□□□□□ -0.21
SKA2-205ENST00000580541 KIAA1614Q5VZ46 1190 aa13.74□□□□□ -0.21
SKA2-205ENST00000580541 BPHLQ86WA6 291 aaPredicted RBP13.74□□□□□ -0.21
SKA2-205ENST00000580541 TMPRSS12Q86WS5 348 aa13.74□□□□□ -0.21
SKA2-205ENST00000580541 GALNT15Q8N3T1 639 aa13.74□□□□□ -0.21
SKA2-205ENST00000580541 CHCHD4Q8N4Q1 142 aa13.74□□□□□ -0.21
SKA2-205ENST00000580541 TTLQ8NG68 377 aa13.74□□□□□ -0.21
SKA2-205ENST00000580541 FLVCR1-AS1Q8TAF5 88 aa13.74□□□□□ -0.21
SKA2-205ENST00000580541 MDM1Q8TC05 714 aa13.74□□□□□ -0.21
SKA2-205ENST00000580541 KLHL6Q8WZ60 621 aa13.74□□□□□ -0.21
SKA2-205ENST00000580541 SEC16BQ96JE7 1060 aa13.74□□□□□ -0.21
SKA2-205ENST00000580541 PRAP1Q96NZ9 151 aa13.74□□□□□ -0.21
SKA2-205ENST00000580541 TRAPPC9Q96Q05 1148 aa13.74□□□□□ -0.21
SKA2-205ENST00000580541 PLCD4Q9BRC7 762 aa13.74□□□□□ -0.21
SKA2-205ENST00000580541 MECRQ9BV79 373 aa13.74□□□□□ -0.21
SKA2-205ENST00000580541 GATA5Q9BWX5 397 aaPredicted RBP13.74□□□□□ -0.21
SKA2-205ENST00000580541 ZNF768Q9H5H4 540 aaKnown RBP13.74□□□□□ -0.21
SKA2-205ENST00000580541 MANSC1Q9H8J5 431 aa13.74□□□□□ -0.21
SKA2-205ENST00000580541 MLXIPLQ9NP71 852 aa13.74□□□□□ -0.21
SKA2-205ENST00000580541 SEMA4BQ9NPR2 832 aaPredicted RBP13.74□□□□□ -0.21
SKA2-205ENST00000580541 SOHLH2Q9NX45 425 aa13.74□□□□□ -0.21
SKA2-205ENST00000580541 ADGRE2Q9UHX3 823 aa13.74□□□□□ -0.21
SKA2-205ENST00000580541 HEATR5BQ9P2D3 2071 aa13.73□□□□□ -0.21
SKA2-205ENST00000580541 IGHV5-10-1A0A0J9YXX1 117 aa13.73□□□□□ -0.21
SKA2-205ENST00000580541 SPAARA0A1B0GVQ0 90 aa13.73□□□□□ -0.21
SKA2-205ENST00000580541 SLC9B1P1A6NJY1 282 aa13.73□□□□□ -0.21
SKA2-205ENST00000580541 A8MU76 341 aa13.73□□□□□ -0.21
SKA2-205ENST00000580541 TXNDC9O14530 226 aa13.73□□□□□ -0.21
SKA2-205ENST00000580541 SRPX2O60687 465 aaPredicted RBP13.73□□□□□ -0.21
SKA2-205ENST00000580541 CRCPO75575 148 aa13.73□□□□□ -0.21
SKA2-205ENST00000580541 DKK1O94907 266 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms