RNA–Protein interactions for RNA: ENST00000577101.5

NDE1-212, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 4

Gene NDE1, Length 575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-212ENST00000577101 RPS27LQ71UM5 84 aaKnown RBP9.38□□□□□ -0.91
NDE1-212ENST00000577101 VN1R4Q7Z5H5 301 aa9.38□□□□□ -0.91
NDE1-212ENST00000577101 THOC6Q86W42 341 aaKnown RBP9.38□□□□□ -0.91
NDE1-212ENST00000577101 PROSER1Q86XN7 944 aa9.38□□□□□ -0.91
NDE1-212ENST00000577101 GPSM1Q86YR5 675 aa9.38□□□□□ -0.91
NDE1-212ENST00000577101 ZNF740Q8NDX6 193 aa9.38□□□□□ -0.91
NDE1-212ENST00000577101 OR4K1Q8NGD4 311 aa9.38□□□□□ -0.91
NDE1-212ENST00000577101 SNIP1Q8TAD8 396 aaKnown RBP9.38□□□□□ -0.91
NDE1-212ENST00000577101 UBTD2Q8WUN7 234 aa9.38□□□□□ -0.91
NDE1-212ENST00000577101 NEIL2Q969S2 332 aa9.38□□□□□ -0.91
NDE1-212ENST00000577101 SLC22A18Q96BI1 424 aa9.38□□□□□ -0.91
NDE1-212ENST00000577101 ALKBH8Q96BT7 664 aaKnown RBP9.38□□□□□ -0.91
NDE1-212ENST00000577101 MED8Q96G25 268 aa9.38□□□□□ -0.91
NDE1-212ENST00000577101 TCTN2Q96GX1 697 aa9.38□□□□□ -0.91
NDE1-212ENST00000577101 ZNF578Q96N58 590 aaPredicted RBP9.38□□□□□ -0.91
NDE1-212ENST00000577101 PRAP1Q96NZ9 151 aa9.38□□□□□ -0.91
NDE1-212ENST00000577101 OR2A5Q96R48 311 aa9.38□□□□□ -0.91
NDE1-212ENST00000577101 RUFY1Q96T51 708 aa9.38□□□□□ -0.91
NDE1-212ENST00000577101 TMEM109Q9BVC6 243 aa9.38□□□□□ -0.91
NDE1-212ENST00000577101 B3GNT4Q9C0J1 378 aa9.38□□□□□ -0.91
NDE1-212ENST00000577101 AICDAQ9GZX7 198 aa9.38□□□□□ -0.91
NDE1-212ENST00000577101 CCDC86Q9H6F5 360 aaKnown RBP9.38□□□□□ -0.91
NDE1-212ENST00000577101 PDE7BQ9NP56 450 aa9.38□□□□□ -0.91
NDE1-212ENST00000577101 MRPS30Q9NP92 439 aaKnown RBP9.38□□□□□ -0.91
NDE1-212ENST00000577101 ACSS2Q9NR19 701 aa9.38□□□□□ -0.91
NDE1-212ENST00000577101 STARD5Q9NSY2 213 aa9.38□□□□□ -0.91
NDE1-212ENST00000577101 SOHLH2Q9NX45 425 aa9.38□□□□□ -0.91
NDE1-212ENST00000577101 NUDT4Q9NZJ9 180 aa9.38□□□□□ -0.91
NDE1-212ENST00000577101 XPR1Q9UBH6 696 aa9.38□□□□□ -0.91
NDE1-212ENST00000577101 RNF112Q9ULX5 631 aa9.38□□□□□ -0.91
NDE1-212ENST00000577101 RAXQ9Y2V3 346 aa9.38□□□□□ -0.91
NDE1-212ENST00000577101 TMEM184BQ9Y519 407 aaPredicted RBP9.38□□□□□ -0.91
NDE1-212ENST00000577101 SCN3AQ9NY46 2000 aa9.38□□□□□ -0.91
NDE1-212ENST00000577101 A0A0J9YVX5 310 aa9.37□□□□□ -0.91
NDE1-212ENST00000577101 IQANK1A0A1B0GTG1 560 aa9.37□□□□□ -0.91
NDE1-212ENST00000577101 A0A1B0GTL3 188 aa9.37□□□□□ -0.91
NDE1-212ENST00000577101 FEZF1A0PJY2 475 aa9.37□□□□□ -0.91
NDE1-212ENST00000577101 CCDC151A5D8V7 595 aa9.37□□□□□ -0.91
NDE1-212ENST00000577101 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.37□□□□□ -0.91
NDE1-212ENST00000577101 E7EQ34 232 aa9.37□□□□□ -0.91
NDE1-212ENST00000577101 TERTO14746 1132 aaKnown RBP9.37□□□□□ -0.91
NDE1-212ENST00000577101 POLR1CO15160 346 aaPredicted RBP9.37□□□□□ -0.91
NDE1-212ENST00000577101 KRT37O76014 449 aa9.37□□□□□ -0.91
NDE1-212ENST00000577101 STK17BO94768 372 aa9.37□□□□□ -0.91
NDE1-212ENST00000577101 KIAA0754O94854 1291 aa9.37□□□□□ -0.91
NDE1-212ENST00000577101 FKBP9O95302 570 aa9.37□□□□□ -0.91
NDE1-212ENST00000577101 SIX3O95343 332 aaPredicted RBP9.37□□□□□ -0.91
NDE1-212ENST00000577101 TBX6O95947 436 aaPredicted RBP9.37□□□□□ -0.91
NDE1-212ENST00000577101 STATHP02808 62 aa9.37□□□□□ -0.91
NDE1-212ENST00000577101 HIST1H2AGP0C0S8 130 aaPredicted RBP9.37□□□□□ -0.91
NDE1-212ENST00000577101 COL6A2P12110 1019 aa9.37□□□□□ -0.91
NDE1-212ENST00000577101 HIST1H2ADP20671 130 aa9.37□□□□□ -0.91
NDE1-212ENST00000577101 F8A1P23610 371 aa9.37□□□□□ -0.91
NDE1-212ENST00000577101 VARSP26640 1264 aaKnown RBP9.37□□□□□ -0.91
NDE1-212ENST00000577101 CMPK1P30085 196 aa9.37□□□□□ -0.91
NDE1-212ENST00000577101 RORAP35398 523 aa9.37□□□□□ -0.91
NDE1-212ENST00000577101 EIF2S3P41091 472 aaKnown RBP9.37□□□□□ -0.91
NDE1-212ENST00000577101 ACY1Q03154 408 aa9.37□□□□□ -0.91
NDE1-212ENST00000577101 SLC18A2Q05940 514 aa9.37□□□□□ -0.91
NDE1-212ENST00000577101 GPS2Q13227 327 aa9.37□□□□□ -0.91
NDE1-212ENST00000577101 E2F2Q14209 437 aa9.37□□□□□ -0.91
NDE1-212ENST00000577101 IL11RAQ14626 422 aa9.37□□□□□ -0.91
NDE1-212ENST00000577101 SETDB1Q15047 1291 aa9.37□□□□□ -0.91
NDE1-212ENST00000577101 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.37□□□□□ -0.91
NDE1-212ENST00000577101 TAF1BQ53T94 588 aaPredicted RBP9.37□□□□□ -0.91
NDE1-212ENST00000577101 CDKL4Q5MAI5 379 aa9.37□□□□□ -0.91
NDE1-212ENST00000577101 DCAF12Q5T6F0 453 aa9.37□□□□□ -0.91
NDE1-212ENST00000577101 ADNP2Q6IQ32 1131 aa9.37□□□□□ -0.91
NDE1-212ENST00000577101 TRABD2AQ86V40 505 aa9.37□□□□□ -0.91
NDE1-212ENST00000577101 MCATQ8IVS2 390 aaKnown RBP9.37□□□□□ -0.91
NDE1-212ENST00000577101 ABHD11Q8NFV4 315 aa9.37□□□□□ -0.91
NDE1-212ENST00000577101 MYRIPQ8NFW9 859 aa9.37□□□□□ -0.91
NDE1-212ENST00000577101 STAG3L4Q8TBR4 150 aa9.37□□□□□ -0.91
NDE1-212ENST00000577101 ZCCHC14Q8WYQ9 949 aaKnown RBP9.37□□□□□ -0.91
NDE1-212ENST00000577101 NKD1Q969G9 470 aa9.37□□□□□ -0.91
NDE1-212ENST00000577101 ZUFSPQ96AP4 578 aa9.37□□□□□ -0.91
NDE1-212ENST00000577101 MTBPQ96DY7 904 aa9.37□□□□□ -0.91
NDE1-212ENST00000577101 NAF1Q96HR8 494 aaKnown RBP9.37□□□□□ -0.91
NDE1-212ENST00000577101 HIST1H2AHQ96KK5 128 aa9.37□□□□□ -0.91
NDE1-212ENST00000577101 TSNARE1Q96NA8 513 aa9.37□□□□□ -0.91
NDE1-212ENST00000577101 HIST1H2AJQ99878 128 aa9.37□□□□□ -0.91
NDE1-212ENST00000577101 EGFL8Q99944 293 aa9.37□□□□□ -0.91
NDE1-212ENST00000577101 H2AFJQ9BTM1 129 aa9.37□□□□□ -0.91
NDE1-212ENST00000577101 CPSF2Q9P2I0 782 aaKnown RBP9.37□□□□□ -0.91
NDE1-212ENST00000577101 TLK1Q9UKI8 766 aa9.37□□□□□ -0.91
NDE1-212ENST00000577101 RARRES3Q9UL19 164 aa9.37□□□□□ -0.91
NDE1-212ENST00000577101 ZMIZ1Q9ULJ6 1067 aa9.37□□□□□ -0.91
NDE1-212ENST00000577101 MRPS2Q9Y399 296 aaKnown RBP9.37□□□□□ -0.91
NDE1-212ENST00000577101 IKBKGQ9Y6K9 419 aa9.37□□□□□ -0.91
NDE1-212ENST00000577101 LAMA5O15230 3695 aa9.36□□□□□ -0.91
NDE1-212ENST00000577101 LOC101059948A0A1B0GTJ6 334 aa9.36□□□□□ -0.91
NDE1-212ENST00000577101 TLDC2A0PJX2 215 aa9.36□□□□□ -0.91
NDE1-212ENST00000577101 ZNF839A8K0R7 811 aa9.36□□□□□ -0.91
NDE1-212ENST00000577101 A8MT66 165 aa9.36□□□□□ -0.91
NDE1-212ENST00000577101 SUPT3HB4E1H0 165 aa9.36□□□□□ -0.91
NDE1-212ENST00000577101 C4orf51C9J302 202 aa9.36□□□□□ -0.91
NDE1-212ENST00000577101 G3V2L1 256 aa9.36□□□□□ -0.91
NDE1-212ENST00000577101 H0YGG7 62 aa9.36□□□□□ -0.91
NDE1-212ENST00000577101 AGPSO00116 658 aa9.36□□□□□ -0.91
NDE1-212ENST00000577101 CDH16O75309 829 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms