RNA–Protein interactions for RNA: ENST00000576334.1

LITAF-219, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-219ENST00000576334 DCAF10Q5QP82 559 aa11.35□□□□□ -0.59
LITAF-219ENST00000576334 ICE2Q659A1 982 aa11.35□□□□□ -0.59
LITAF-219ENST00000576334 PAQR3Q6TCH7 311 aa11.35□□□□□ -0.59
LITAF-219ENST00000576334 UBE2R2Q712K3 238 aaPredicted RBP11.35□□□□□ -0.59
LITAF-219ENST00000576334 LAPTM4BQ86VI4 370 aa11.35□□□□□ -0.59
LITAF-219ENST00000576334 PAQR7Q86WK9 346 aa11.35□□□□□ -0.59
LITAF-219ENST00000576334 ANKMY2Q8IV38 441 aa11.35□□□□□ -0.59
LITAF-219ENST00000576334 C17orf53Q8N3J3 647 aaPredicted RBP11.35□□□□□ -0.59
LITAF-219ENST00000576334 TMEM102Q8N9M5 508 aaPredicted RBP11.35□□□□□ -0.59
LITAF-219ENST00000576334 PTERQ96BW5 349 aa11.35□□□□□ -0.59
LITAF-219ENST00000576334 ZFYVE21Q9BQ24 234 aa11.35□□□□□ -0.59
LITAF-219ENST00000576334 MACROD1Q9BQ69 325 aa11.35□□□□□ -0.59
LITAF-219ENST00000576334 PLCD4Q9BRC7 762 aa11.35□□□□□ -0.59
LITAF-219ENST00000576334 VPS9D1Q9Y2B5 631 aa11.35□□□□□ -0.59
LITAF-219ENST00000576334 MRPS2Q9Y399 296 aaKnown RBP11.35□□□□□ -0.59
LITAF-219ENST00000576334 KLK4Q9Y5K2 254 aa11.35□□□□□ -0.59
LITAF-219ENST00000576334 CSAG2Q9Y5P2 127 aa11.35□□□□□ -0.59
LITAF-219ENST00000576334 HS3ST3B1Q9Y662 390 aa11.35□□□□□ -0.59
LITAF-219ENST00000576334 SHANK1Q9Y566 2161 aa11.35□□□□□ -0.59
LITAF-219ENST00000576334 ESPNB1AK53 854 aa11.34□□□□□ -0.59
LITAF-219ENST00000576334 PIAS1O75925 651 aa11.34□□□□□ -0.59
LITAF-219ENST00000576334 SORBS2O94875 1100 aaKnown RBP11.34□□□□□ -0.59
LITAF-219ENST00000576334 MPC1LP0DKB6 136 aa11.34□□□□□ -0.59
LITAF-219ENST00000576334 EFNA3P52797 238 aa11.34□□□□□ -0.59
LITAF-219ENST00000576334 PRDX1Q06830 199 aaKnown RBP11.34□□□□□ -0.59
LITAF-219ENST00000576334 FASTKD3Q14CZ7 662 aaKnown RBP11.34□□□□□ -0.59
LITAF-219ENST00000576334 PHKG1Q16816 387 aa11.34□□□□□ -0.59
LITAF-219ENST00000576334 SYT16Q17RD7 645 aa11.34□□□□□ -0.59
LITAF-219ENST00000576334 ZXDCQ2QGD7 858 aaPredicted RBP11.34□□□□□ -0.59
LITAF-219ENST00000576334 PRTGQ2VWP7 1150 aa11.34□□□□□ -0.59
LITAF-219ENST00000576334 TTLL9Q3SXZ7 439 aa11.34□□□□□ -0.59
LITAF-219ENST00000576334 PLEKHN1Q494U1 663 aaPredicted RBP11.34□□□□□ -0.59
LITAF-219ENST00000576334 VWA2Q5GFL6 755 aa11.34□□□□□ -0.59
LITAF-219ENST00000576334 TCTE1Q5JU00 501 aa11.34□□□□□ -0.59
LITAF-219ENST00000576334 ARMC3Q5W041 872 aa11.34□□□□□ -0.59
LITAF-219ENST00000576334 SLC6A19Q695T7 634 aa11.34□□□□□ -0.59
LITAF-219ENST00000576334 ZNF425Q6IV72 752 aa11.34□□□□□ -0.59
LITAF-219ENST00000576334 JMJD6Q6NYC1 403 aaPredicted RBP11.34□□□□□ -0.59
LITAF-219ENST00000576334 KIRREL2Q6UWL6 708 aa11.34□□□□□ -0.59
LITAF-219ENST00000576334 NEK10Q6ZWH5 1172 aa11.34□□□□□ -0.59
LITAF-219ENST00000576334 ADCK2Q7Z695 626 aa11.34□□□□□ -0.59
LITAF-219ENST00000576334 GALNT16Q8N428 558 aa11.34□□□□□ -0.59
LITAF-219ENST00000576334 TTC29Q8NA56 475 aaPredicted RBP11.34□□□□□ -0.59
LITAF-219ENST00000576334 CALML6Q8TD86 181 aa11.34□□□□□ -0.59
LITAF-219ENST00000576334 SLCO2A1Q92959 643 aa11.34□□□□□ -0.59
LITAF-219ENST00000576334 COL26A1Q96A83 441 aa11.34□□□□□ -0.59
LITAF-219ENST00000576334 ALKBH8Q96BT7 664 aaKnown RBP11.34□□□□□ -0.59
LITAF-219ENST00000576334 C8orf44Q96CB5 159 aa11.34□□□□□ -0.59
LITAF-219ENST00000576334 C19orf60Q96EN9 201 aa11.34□□□□□ -0.59
LITAF-219ENST00000576334 OR2A5Q96R48 311 aa11.34□□□□□ -0.59
LITAF-219ENST00000576334 SMAD5Q99717 465 aaKnown RBP11.34□□□□□ -0.59
LITAF-219ENST00000576334 FAM167BQ9BTA0 163 aa11.34□□□□□ -0.59
LITAF-219ENST00000576334 ATG10Q9H0Y0 220 aa11.34□□□□□ -0.59
LITAF-219ENST00000576334 ZNF552Q9H707 407 aaPredicted RBP11.34□□□□□ -0.59
LITAF-219ENST00000576334 PPANQ9NQ55 473 aaKnown RBP11.34□□□□□ -0.59
LITAF-219ENST00000576334 FAM114A2Q9NRY5 505 aa11.34□□□□□ -0.59
LITAF-219ENST00000576334 CDC23Q9UJX2 597 aa11.34□□□□□ -0.59
LITAF-219ENST00000576334 FBXL4Q9UKA2 621 aa11.34□□□□□ -0.59
LITAF-219ENST00000576334 IKZF3Q9UKT9 509 aa11.34□□□□□ -0.59
LITAF-219ENST00000576334 PDE10AQ9Y233 779 aa11.34□□□□□ -0.59
LITAF-219ENST00000576334 RUVBL1Q9Y265 456 aaKnown RBP11.34□□□□□ -0.59
LITAF-219ENST00000576334 ZNF451Q9Y4E5 1061 aa11.34□□□□□ -0.59
LITAF-219ENST00000576334 MRFAP1Q9Y605 127 aa11.34□□□□□ -0.59
LITAF-219ENST00000576334 PTPN13Q12923 2485 aa11.33□□□□□ -0.6
LITAF-219ENST00000576334 SCN3AQ9NY46 2000 aa11.33□□□□□ -0.6
LITAF-219ENST00000576334 VSTM2BA6NLU5 285 aa11.33□□□□□ -0.6
LITAF-219ENST00000576334 H7BY64 318 aa11.33□□□□□ -0.6
LITAF-219ENST00000576334 AGPSO00116 658 aa11.33□□□□□ -0.6
LITAF-219ENST00000576334 PEX12O00623 359 aa11.33□□□□□ -0.6
LITAF-219ENST00000576334 ZBTB14O43829 449 aa11.33□□□□□ -0.6
LITAF-219ENST00000576334 SRPX2O60687 465 aaPredicted RBP11.33□□□□□ -0.6
LITAF-219ENST00000576334 VPS26AO75436 327 aa11.33□□□□□ -0.6
LITAF-219ENST00000576334 ONECUT2O95948 504 aa11.33□□□□□ -0.6
LITAF-219ENST00000576334 GNLYP22749 145 aa11.33□□□□□ -0.6
LITAF-219ENST00000576334 SKIV2L2P42285 1042 aaKnown RBP11.33□□□□□ -0.6
LITAF-219ENST00000576334 ITGA8P53708 1063 aa11.33□□□□□ -0.6
LITAF-219ENST00000576334 RRADP55042 308 aa11.33□□□□□ -0.6
LITAF-219ENST00000576334 TBPL1P62380 186 aa11.33□□□□□ -0.6
LITAF-219ENST00000576334 DR1Q01658 176 aa11.33□□□□□ -0.6
LITAF-219ENST00000576334 KLC1Q07866 573 aa11.33□□□□□ -0.6
LITAF-219ENST00000576334 Q0VFX4 171 aa11.33□□□□□ -0.6
LITAF-219ENST00000576334 ARHGAP19Q14CB8 494 aa11.33□□□□□ -0.6
LITAF-219ENST00000576334 SPANXN3Q5MJ09 141 aa11.33□□□□□ -0.6
LITAF-219ENST00000576334 TEDDM1Q5T9Z0 273 aa11.33□□□□□ -0.6
LITAF-219ENST00000576334 THEMIS2Q5TEJ8 643 aa11.33□□□□□ -0.6
LITAF-219ENST00000576334 HIBCHQ6NVY1 386 aaPredicted RBP11.33□□□□□ -0.6
LITAF-219ENST00000576334 PRSS41Q7RTY9 318 aa11.33□□□□□ -0.6
LITAF-219ENST00000576334 PARP9Q8IXQ6 854 aa11.33□□□□□ -0.6
LITAF-219ENST00000576334 ARHGEF39Q8N4T4 335 aa11.33□□□□□ -0.6
LITAF-219ENST00000576334 CSNK1A1LQ8N752 337 aa11.33□□□□□ -0.6
LITAF-219ENST00000576334 CPT1CQ8TCG5 803 aa11.33□□□□□ -0.6
LITAF-219ENST00000576334 STT3BQ8TCJ2 826 aa11.33□□□□□ -0.6
LITAF-219ENST00000576334 FKBP10Q96AY3 582 aa11.33□□□□□ -0.6
LITAF-219ENST00000576334 CERS2Q96G23 380 aa11.33□□□□□ -0.6
LITAF-219ENST00000576334 CABS1Q96KC9 395 aa11.33□□□□□ -0.6
LITAF-219ENST00000576334 PRAP1Q96NZ9 151 aa11.33□□□□□ -0.6
LITAF-219ENST00000576334 NAPGQ99747 312 aaPredicted RBP11.33□□□□□ -0.6
LITAF-219ENST00000576334 OLFM1Q99784 485 aa11.33□□□□□ -0.6
LITAF-219ENST00000576334 C17orf62Q9BQA9 187 aa11.33□□□□□ -0.6
LITAF-219ENST00000576334 SLC26A1Q9H2B4 701 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms