RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 CYP4V2Q6ZWL3 525 aaPredicted RBP12.78□□□□□ -0.36
PCDHGB3-201ENST00000576222 ZNF367Q7RTV3 350 aa12.78□□□□□ -0.36
PCDHGB3-201ENST00000576222 METTL3Q86U44 580 aaKnown RBP12.78□□□□□ -0.36
PCDHGB3-201ENST00000576222 ITIH5Q86UX2 942 aa12.78□□□□□ -0.36
PCDHGB3-201ENST00000576222 TSPYL5Q86VY4 417 aaPredicted RBP12.78□□□□□ -0.36
PCDHGB3-201ENST00000576222 CCDC36Q8IYA8 594 aa12.78□□□□□ -0.36
PCDHGB3-201ENST00000576222 ZNF655Q8N720 491 aaPredicted RBP12.78□□□□□ -0.36
PCDHGB3-201ENST00000576222 WACQ9BTA9 647 aa12.78□□□□□ -0.36
PCDHGB3-201ENST00000576222 MCMBPQ9BTE3 642 aa12.78□□□□□ -0.36
PCDHGB3-201ENST00000576222 KCNH6Q9H252 994 aa12.78□□□□□ -0.36
PCDHGB3-201ENST00000576222 INTS6Q9UL03 887 aaKnown RBP12.78□□□□□ -0.36
PCDHGB3-201ENST00000576222 LAMB4A4D0S4 1761 aa12.78□□□□□ -0.36
PCDHGB3-201ENST00000576222 FAM47E-STBD1D6RA91 191 aa12.78□□□□□ -0.36
PCDHGB3-201ENST00000576222 GADD45AP24522 165 aa12.78□□□□□ -0.36
PCDHGB3-201ENST00000576222 CD68P34810 354 aaPredicted RBP12.78□□□□□ -0.36
PCDHGB3-201ENST00000576222 SLC9A3P48764 834 aa12.78□□□□□ -0.36
PCDHGB3-201ENST00000576222 ZNF267Q14586 743 aaPredicted RBP12.78□□□□□ -0.36
PCDHGB3-201ENST00000576222 ARHGAP15Q53QZ3 475 aa12.78□□□□□ -0.36
PCDHGB3-201ENST00000576222 FRG2Q64ET8 278 aa12.78□□□□□ -0.36
PCDHGB3-201ENST00000576222 MARCH9Q86YJ5 346 aa12.78□□□□□ -0.36
PCDHGB3-201ENST00000576222 ALPK1Q96QP1 1244 aa12.78□□□□□ -0.36
PCDHGB3-201ENST00000576222 FRG2BQ96QU4 278 aa12.78□□□□□ -0.36
PCDHGB3-201ENST00000576222 RAD18Q9NS91 495 aa12.78□□□□□ -0.36
PCDHGB3-201ENST00000576222 RDH8Q9NYR8 311 aa12.78□□□□□ -0.36
PCDHGB3-201ENST00000576222 SMIM30A4D0T7 59 aa12.78□□□□□ -0.36
PCDHGB3-201ENST00000576222 INMT-MINDY4F8WBC2 141 aa12.78□□□□□ -0.36
PCDHGB3-201ENST00000576222 MID1O15344 667 aa12.78□□□□□ -0.36
PCDHGB3-201ENST00000576222 TGFBR2P37173 567 aa12.78□□□□□ -0.36
PCDHGB3-201ENST00000576222 NSG1P42857 185 aa12.78□□□□□ -0.36
PCDHGB3-201ENST00000576222 DUSP4Q13115 394 aa12.78□□□□□ -0.36
PCDHGB3-201ENST00000576222 CBLBQ13191 982 aa12.78□□□□□ -0.36
PCDHGB3-201ENST00000576222 AQP11Q8NBQ7 271 aa12.78□□□□□ -0.36
PCDHGB3-201ENST00000576222 ACVR1CQ8NER5 493 aa12.78□□□□□ -0.36
PCDHGB3-201ENST00000576222 SLC2A13Q96QE2 648 aa12.78□□□□□ -0.36
PCDHGB3-201ENST00000576222 CHIAQ9BZP6 476 aa12.78□□□□□ -0.36
PCDHGB3-201ENST00000576222 AASSQ9UDR5 926 aa12.78□□□□□ -0.36
PCDHGB3-201ENST00000576222 MAGED1Q9Y5V3 778 aaPredicted RBP12.78□□□□□ -0.36
PCDHGB3-201ENST00000576222 A0A1B0GVM2 712 aa12.77□□□□□ -0.36
PCDHGB3-201ENST00000576222 FAM86C2PA6NEL3 165 aa12.77□□□□□ -0.36
PCDHGB3-201ENST00000576222 OR6C75A6NL08 312 aa12.77□□□□□ -0.36
PCDHGB3-201ENST00000576222 A8MU76 341 aa12.77□□□□□ -0.36
PCDHGB3-201ENST00000576222 FGF4P08620 206 aa12.77□□□□□ -0.36
PCDHGB3-201ENST00000576222 FAM163BP0C2L3 166 aa12.77□□□□□ -0.36
PCDHGB3-201ENST00000576222 EBLN1P0CF75 366 aa12.77□□□□□ -0.36
PCDHGB3-201ENST00000576222 ZNF24P17028 368 aa12.77□□□□□ -0.36
PCDHGB3-201ENST00000576222 KDELR2P33947 212 aa12.77□□□□□ -0.36
PCDHGB3-201ENST00000576222 ACVRL1P37023 503 aa12.77□□□□□ -0.36
PCDHGB3-201ENST00000576222 CYBRD1Q53TN4 286 aa12.77□□□□□ -0.36
PCDHGB3-201ENST00000576222 NUDT18Q6ZVK8 323 aa12.77□□□□□ -0.36
PCDHGB3-201ENST00000576222 OR6Q1Q8NGQ2 317 aa12.77□□□□□ -0.36
PCDHGB3-201ENST00000576222 PKP4Q99569 1192 aa12.77□□□□□ -0.36
PCDHGB3-201ENST00000576222 CCDC32Q9BV29 185 aa12.77□□□□□ -0.36
PCDHGB3-201ENST00000576222 HAS3O00219 553 aa12.77□□□□□ -0.36
PCDHGB3-201ENST00000576222 DDNO94850 711 aaPredicted RBP12.77□□□□□ -0.36
PCDHGB3-201ENST00000576222 ERP29P30040 261 aaKnown RBP12.77□□□□□ -0.36
PCDHGB3-201ENST00000576222 CORO1AP31146 461 aaKnown RBP12.77□□□□□ -0.36
PCDHGB3-201ENST00000576222 FAUP35544 74 aaKnown RBP12.77□□□□□ -0.36
PCDHGB3-201ENST00000576222 HNRNPA0Q13151 305 aaKnown RBP12.77□□□□□ -0.36
PCDHGB3-201ENST00000576222 OR4D1Q15615 310 aa12.77□□□□□ -0.36
PCDHGB3-201ENST00000576222 ZSWIM9Q86XI8 627 aa12.77□□□□□ -0.36
PCDHGB3-201ENST00000576222 HS3ST5Q8IZT8 346 aa12.77□□□□□ -0.36
PCDHGB3-201ENST00000576222 PCSK9Q8NBP7 692 aaKnown RBP12.77□□□□□ -0.36
PCDHGB3-201ENST00000576222 OR13F1Q8NGS4 319 aa12.77□□□□□ -0.36
PCDHGB3-201ENST00000576222 MAGIXQ9H6Y5 334 aa12.77□□□□□ -0.36
PCDHGB3-201ENST00000576222 HCN4Q9Y3Q4 1203 aa12.77□□□□□ -0.36
PCDHGB3-201ENST00000576222 CLCA3PQ9Y6N3 262 aa12.77□□□□□ -0.36
PCDHGB3-201ENST00000576222 A0A1W2PQ67 120 aa12.77□□□□□ -0.37
PCDHGB3-201ENST00000576222 ARL5CA6NH57 179 aa12.77□□□□□ -0.37
PCDHGB3-201ENST00000576222 HPGDP15428 266 aa12.77□□□□□ -0.37
PCDHGB3-201ENST00000576222 ACSL1P33121 698 aa12.77□□□□□ -0.37
PCDHGB3-201ENST00000576222 MAZP56270 477 aaKnown RBP12.77□□□□□ -0.37
PCDHGB3-201ENST00000576222 CREB5Q02930 508 aa12.77□□□□□ -0.37
PCDHGB3-201ENST00000576222 PUDPQ08623 228 aa12.77□□□□□ -0.37
PCDHGB3-201ENST00000576222 TUBB3Q13509 450 aa12.77□□□□□ -0.37
PCDHGB3-201ENST00000576222 CRB2Q5IJ48 1285 aa12.77□□□□□ -0.37
PCDHGB3-201ENST00000576222 CHMP1BQ7LBR1 199 aa12.77□□□□□ -0.37
PCDHGB3-201ENST00000576222 KRTCAP2Q8N6L1 136 aa12.77□□□□□ -0.37
PCDHGB3-201ENST00000576222 MYOCQ99972 504 aa12.77□□□□□ -0.37
PCDHGB3-201ENST00000576222 A0A096LPI6 279 aa12.77□□□□□ -0.37
PCDHGB3-201ENST00000576222 TRBC2A0A5B9 178 aa12.77□□□□□ -0.37
PCDHGB3-201ENST00000576222 TBX18O95935 607 aa12.77□□□□□ -0.37
PCDHGB3-201ENST00000576222 CAPZA2P47755 286 aa12.77□□□□□ -0.37
PCDHGB3-201ENST00000576222 ARSDP51689 593 aa12.77□□□□□ -0.37
PCDHGB3-201ENST00000576222 VMACQ2NL98 169 aa12.77□□□□□ -0.37
PCDHGB3-201ENST00000576222 TNFAIP8L2Q6P589 184 aaPredicted RBP12.77□□□□□ -0.37
PCDHGB3-201ENST00000576222 CHDHQ8NE62 594 aaPredicted RBP12.77□□□□□ -0.37
PCDHGB3-201ENST00000576222 KCNJ9Q92806 393 aa12.77□□□□□ -0.37
PCDHGB3-201ENST00000576222 TMEM80Q96HE8 168 aa12.77□□□□□ -0.37
PCDHGB3-201ENST00000576222 YIPF2Q9BWQ6 316 aa12.77□□□□□ -0.37
PCDHGB3-201ENST00000576222 FAM83DQ9H4H8 585 aa12.77□□□□□ -0.37
PCDHGB3-201ENST00000576222 DNAJC27Q9NZQ0 273 aa12.77□□□□□ -0.37
PCDHGB3-201ENST00000576222 STON1Q9Y6Q2 735 aa12.77□□□□□ -0.37
PCDHGB3-201ENST00000576222 NT5C1B-RDH14C9J2C7 533 aa12.76□□□□□ -0.37
PCDHGB3-201ENST00000576222 PEPDP12955 493 aa12.76□□□□□ -0.37
PCDHGB3-201ENST00000576222 KCNA5P22460 613 aa12.76□□□□□ -0.37
PCDHGB3-201ENST00000576222 HOXD10P28358 340 aa12.76□□□□□ -0.37
PCDHGB3-201ENST00000576222 ZNF157P51786 506 aaPredicted RBP12.76□□□□□ -0.37
PCDHGB3-201ENST00000576222 EMX1Q04741 257 aaPredicted RBP12.76□□□□□ -0.37
PCDHGB3-201ENST00000576222 ZNF789Q5FWF6 425 aa12.76□□□□□ -0.37
PCDHGB3-201ENST00000576222 SNX20Q7Z614 316 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms