RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 UGT3A1Q6NUS8 523 aa9.22□□□□□ -0.93
NPLOC4-212ENST00000573328 NEK10Q6ZWH5 1172 aa9.22□□□□□ -0.93
NPLOC4-212ENST00000573328 UBE2R2Q712K3 238 aaPredicted RBP9.22□□□□□ -0.93
NPLOC4-212ENST00000573328 COX15Q7KZN9 410 aa9.22□□□□□ -0.93
NPLOC4-212ENST00000573328 TMEM151BQ8IW70 566 aa9.22□□□□□ -0.93
NPLOC4-212ENST00000573328 PALM2Q8IXS6 379 aa9.22□□□□□ -0.93
NPLOC4-212ENST00000573328 CPNE9Q8IYJ1 553 aa9.22□□□□□ -0.93
NPLOC4-212ENST00000573328 IQCKQ8N0W5 287 aa9.22□□□□□ -0.93
NPLOC4-212ENST00000573328 OR4N4Q8N0Y3 316 aa9.22□□□□□ -0.93
NPLOC4-212ENST00000573328 FAM26EQ8N5C1 309 aa9.22□□□□□ -0.93
NPLOC4-212ENST00000573328 RBMXL3Q8N7X1 1067 aaKnown RBP9.22□□□□□ -0.93
NPLOC4-212ENST00000573328 GIMAP7Q8NHV1 300 aa9.22□□□□□ -0.93
NPLOC4-212ENST00000573328 CD200R1Q8TD46 325 aa9.22□□□□□ -0.93
NPLOC4-212ENST00000573328 INPP5DQ92835 1189 aa9.22□□□□□ -0.93
NPLOC4-212ENST00000573328 PNPLA2Q96AD5 504 aa9.22□□□□□ -0.93
NPLOC4-212ENST00000573328 MIEF2Q96C03 454 aa9.22□□□□□ -0.93
NPLOC4-212ENST00000573328 CAPZA3Q96KX2 299 aa9.22□□□□□ -0.93
NPLOC4-212ENST00000573328 SPSB2Q99619 263 aa9.22□□□□□ -0.93
NPLOC4-212ENST00000573328 CRB3Q9BUF7 120 aa9.22□□□□□ -0.93
NPLOC4-212ENST00000573328 PPANQ9NQ55 473 aaKnown RBP9.22□□□□□ -0.93
NPLOC4-212ENST00000573328 C5AR2Q9P296 337 aa9.22□□□□□ -0.93
NPLOC4-212ENST00000573328 STOX2Q9P2F5 926 aaPredicted RBP9.22□□□□□ -0.93
NPLOC4-212ENST00000573328 ANKMY1Q9P2S6 941 aa9.22□□□□□ -0.93
NPLOC4-212ENST00000573328 ZNF282Q9UDV7 671 aaPredicted RBP9.22□□□□□ -0.93
NPLOC4-212ENST00000573328 PCYOX1Q9UHG3 505 aa9.22□□□□□ -0.93
NPLOC4-212ENST00000573328 FBXO5Q9UKT4 447 aa9.22□□□□□ -0.93
NPLOC4-212ENST00000573328 CPAMD8Q8IZJ3 1885 aa9.21□□□□□ -0.93
NPLOC4-212ENST00000573328 FITM1A5D6W6 292 aa9.21□□□□□ -0.94
NPLOC4-212ENST00000573328 H0YGG7 62 aa9.21□□□□□ -0.94
NPLOC4-212ENST00000573328 CES2O00748 559 aa9.21□□□□□ -0.94
NPLOC4-212ENST00000573328 MAP2K7O14733 419 aa9.21□□□□□ -0.94
NPLOC4-212ENST00000573328 PRPF4O43172 522 aaKnown RBP eCLIP9.21□□□□□ -0.94
NPLOC4-212ENST00000573328 BANF1O75531 89 aa9.21□□□□□ -0.94
NPLOC4-212ENST00000573328 HAUS5O94927 633 aa9.21□□□□□ -0.94
NPLOC4-212ENST00000573328 AGFG2O95081 481 aa9.21□□□□□ -0.94
NPLOC4-212ENST00000573328 TCP1P17987 556 aaKnown RBP9.21□□□□□ -0.94
NPLOC4-212ENST00000573328 RGS4P49798 205 aa9.21□□□□□ -0.94
NPLOC4-212ENST00000573328 ARF3P61204 181 aaPredicted RBP9.21□□□□□ -0.94
NPLOC4-212ENST00000573328 DHX9Q08211 1270 aaKnown RBP9.21□□□□□ -0.94
NPLOC4-212ENST00000573328 INPP5JQ15735 1006 aaPredicted RBP9.21□□□□□ -0.94
NPLOC4-212ENST00000573328 HKDC1Q2TB90 917 aa9.21□□□□□ -0.94
NPLOC4-212ENST00000573328 RNASEH2BQ5TBB1 312 aaKnown RBP9.21□□□□□ -0.94
NPLOC4-212ENST00000573328 PRAMEF13Q5VWM6 474 aa9.21□□□□□ -0.94
NPLOC4-212ENST00000573328 LRRC8EQ6NSJ5 796 aa9.21□□□□□ -0.94
NPLOC4-212ENST00000573328 PRMT9Q6P2P2 845 aa9.21□□□□□ -0.94
NPLOC4-212ENST00000573328 ZNF549Q6P9A3 640 aa9.21□□□□□ -0.94
NPLOC4-212ENST00000573328 PIWIL4Q7Z3Z4 852 aaKnown RBP9.21□□□□□ -0.94
NPLOC4-212ENST00000573328 PCGF5Q86SE9 256 aa9.21□□□□□ -0.94
NPLOC4-212ENST00000573328 PAQR7Q86WK9 346 aa9.21□□□□□ -0.94
NPLOC4-212ENST00000573328 SPNS2Q8IVW8 549 aa9.21□□□□□ -0.94
NPLOC4-212ENST00000573328 MYO1HQ8N1T3 1032 aa9.21□□□□□ -0.94
NPLOC4-212ENST00000573328 AGGF1Q8N302 714 aaeCLIP9.21□□□□□ -0.942e-7■□□□□ 10.1
NPLOC4-212ENST00000573328 ZADH2Q8N4Q0 377 aa9.21□□□□□ -0.94
NPLOC4-212ENST00000573328 CSNK1A1LQ8N752 337 aa9.21□□□□□ -0.94
NPLOC4-212ENST00000573328 GALNT11Q8NCW6 608 aa9.21□□□□□ -0.94
NPLOC4-212ENST00000573328 ZNF480Q8WV37 535 aa9.21□□□□□ -0.94
NPLOC4-212ENST00000573328 ANP32BQ92688 251 aaKnown RBP9.21□□□□□ -0.94
NPLOC4-212ENST00000573328 ALKBH8Q96BT7 664 aaKnown RBP9.21□□□□□ -0.94
NPLOC4-212ENST00000573328 MMABQ96EY8 250 aaPredicted RBP9.21□□□□□ -0.94
NPLOC4-212ENST00000573328 CFAP36Q96G28 342 aa9.21□□□□□ -0.94
NPLOC4-212ENST00000573328 SIGLEC10Q96LC7 697 aa9.21□□□□□ -0.94
NPLOC4-212ENST00000573328 ZNF285Q96NJ3 590 aa9.21□□□□□ -0.94
NPLOC4-212ENST00000573328 NDNQ99608 321 aa9.21□□□□□ -0.94
NPLOC4-212ENST00000573328 PLCD4Q9BRC7 762 aa9.21□□□□□ -0.94
NPLOC4-212ENST00000573328 AARSD1Q9BTE6 412 aaKnown RBP9.21□□□□□ -0.94
NPLOC4-212ENST00000573328 SLC26A1Q9H2B4 701 aa9.21□□□□□ -0.94
NPLOC4-212ENST00000573328 CCDC177Q9NQR7 707 aaPredicted RBP9.21□□□□□ -0.94
NPLOC4-212ENST00000573328 SEMA3GQ9NS98 782 aa9.21□□□□□ -0.94
NPLOC4-212ENST00000573328 DHRS7Q9Y394 339 aa9.21□□□□□ -0.94
NPLOC4-212ENST00000573328 NEU2Q9Y3R4 380 aa9.21□□□□□ -0.94
NPLOC4-212ENST00000573328 MAP4K5Q9Y4K4 846 aa9.21□□□□□ -0.94
NPLOC4-212ENST00000573328 KLK4Q9Y5K2 254 aa9.21□□□□□ -0.94
NPLOC4-212ENST00000573328 HS3ST3B1Q9Y662 390 aa9.21□□□□□ -0.94
NPLOC4-212ENST00000573328 CNTRLQ7Z7A1 2325 aa9.2□□□□□ -0.94
NPLOC4-212ENST00000573328 SOCS6O14544 535 aa9.2□□□□□ -0.94
NPLOC4-212ENST00000573328 FFAR3O14843 346 aa9.2□□□□□ -0.94
NPLOC4-212ENST00000573328 HAT1O14929 419 aa9.2□□□□□ -0.94
NPLOC4-212ENST00000573328 GPR42O15529 346 aa9.2□□□□□ -0.94
NPLOC4-212ENST00000573328 MED26O95402 600 aa9.2□□□□□ -0.94
NPLOC4-212ENST00000573328 TTC4O95801 387 aa9.2□□□□□ -0.94
NPLOC4-212ENST00000573328 ZGLP1P0C6A0 271 aa9.2□□□□□ -0.94
NPLOC4-212ENST00000573328 ACPPP15309 386 aa9.2□□□□□ -0.94
NPLOC4-212ENST00000573328 EZRP15311 586 aaKnown RBP9.2□□□□□ -0.94
NPLOC4-212ENST00000573328 VARSP26640 1264 aaKnown RBP9.2□□□□□ -0.94
NPLOC4-212ENST00000573328 IMPA1P29218 277 aa9.2□□□□□ -0.94
NPLOC4-212ENST00000573328 CARSP49589 748 aaKnown RBP9.2□□□□□ -0.94
NPLOC4-212ENST00000573328 TBPL1P62380 186 aa9.2□□□□□ -0.94
NPLOC4-212ENST00000573328 ABATP80404 500 aa9.2□□□□□ -0.94
NPLOC4-212ENST00000573328 PRDX1Q06830 199 aaKnown RBP9.2□□□□□ -0.94
NPLOC4-212ENST00000573328 KLC1Q07866 573 aa9.2□□□□□ -0.94
NPLOC4-212ENST00000573328 SPANXN3Q5MJ09 141 aa9.2□□□□□ -0.94
NPLOC4-212ENST00000573328 FHL5Q5TD97 284 aa9.2□□□□□ -0.94
NPLOC4-212ENST00000573328 PLD3Q8IV08 490 aa9.2□□□□□ -0.94
NPLOC4-212ENST00000573328 KLHL7Q8IXQ5 586 aa9.2□□□□□ -0.94
NPLOC4-212ENST00000573328 PARP9Q8IXQ6 854 aa9.2□□□□□ -0.94
NPLOC4-212ENST00000573328 Q8NA96 180 aa9.2□□□□□ -0.94
NPLOC4-212ENST00000573328 FBXO15Q8NCQ5 510 aaPredicted RBP9.2□□□□□ -0.94
NPLOC4-212ENST00000573328 C2CD4AQ8NCU7 369 aaPredicted RBP9.2□□□□□ -0.94
NPLOC4-212ENST00000573328 STT3BQ8TCJ2 826 aa9.2□□□□□ -0.94
NPLOC4-212ENST00000573328 MCOLN3Q8TDD5 553 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms