RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 LINC00303Q3SY05 128 aa19.8■□□□□ 0.76
CHMP6-204ENST00000572778 WASHC2DQ5SRD0 308 aa19.8■□□□□ 0.76
CHMP6-204ENST00000572778 FBXO42Q6P3S6 717 aa19.8■□□□□ 0.76
CHMP6-204ENST00000572778 BORAQ6PGQ7 559 aa19.8■□□□□ 0.76
CHMP6-204ENST00000572778 TTLL10Q6ZVT0 673 aa19.8■□□□□ 0.76
CHMP6-204ENST00000572778 RNF44Q7L0R7 432 aa19.8■□□□□ 0.76
CHMP6-204ENST00000572778 ENDOVQ8N8Q3 282 aaKnown RBP19.8■□□□□ 0.76
CHMP6-204ENST00000572778 LSM14AQ8ND56 463 aaKnown RBP19.8■□□□□ 0.76
CHMP6-204ENST00000572778 PROKR1Q8TCW9 393 aa19.8■□□□□ 0.76
CHMP6-204ENST00000572778 ANKRD49Q8WVL7 239 aa19.8■□□□□ 0.76
CHMP6-204ENST00000572778 GPR22Q99680 433 aa19.8■□□□□ 0.76
CHMP6-204ENST00000572778 NLNQ9BYT8 704 aa19.8■□□□□ 0.76
CHMP6-204ENST00000572778 POPDC3Q9HBV1 291 aa19.8■□□□□ 0.76
CHMP6-204ENST00000572778 CUEDC1Q9NWM3 386 aaPredicted RBP19.8■□□□□ 0.76
CHMP6-204ENST00000572778 LOC105369274A0A096LPK9 316 aa19.79■□□□□ 0.76
CHMP6-204ENST00000572778 LOC102723532A0A0G2JNH3 316 aa19.79■□□□□ 0.76
CHMP6-204ENST00000572778 NPEPPSL1A6NEC2 478 aa19.79■□□□□ 0.76
CHMP6-204ENST00000572778 CDC7O00311 574 aa19.79■□□□□ 0.76
CHMP6-204ENST00000572778 PHGDHO43175 533 aaKnown RBP19.79■□□□□ 0.76
CHMP6-204ENST00000572778 RAB40ALP0C0E4 278 aa19.79■□□□□ 0.76
CHMP6-204ENST00000572778 STMN1P16949 149 aa19.79■□□□□ 0.76
CHMP6-204ENST00000572778 PHBP35232 272 aa19.79■□□□□ 0.76
CHMP6-204ENST00000572778 NAB1Q13506 487 aa19.79■□□□□ 0.76
CHMP6-204ENST00000572778 EFTUD2Q15029 972 aaKnown RBP eCLIP19.79■□□□□ 0.763e-11■■■■■ 62.4
CHMP6-204ENST00000572778 CRTC2Q53ET0 693 aaPredicted RBP19.79■□□□□ 0.76
CHMP6-204ENST00000572778 MLIPQ5VWP3 458 aa19.79■□□□□ 0.76
CHMP6-204ENST00000572778 ZNF385CQ66K41 422 aaPredicted RBP19.79■□□□□ 0.76
CHMP6-204ENST00000572778 FAM198BQ6UWH4 519 aa19.79■□□□□ 0.76
CHMP6-204ENST00000572778 PAQR7Q86WK9 346 aa19.79■□□□□ 0.76
CHMP6-204ENST00000572778 OR4N4Q8N0Y3 316 aa19.79■□□□□ 0.76
CHMP6-204ENST00000572778 MRRFQ96E11 262 aaKnown RBP19.79■□□□□ 0.76
CHMP6-204ENST00000572778 GBP5Q96PP8 586 aa19.79■□□□□ 0.76
CHMP6-204ENST00000572778 FMO2Q99518 471 aa19.79■□□□□ 0.76
CHMP6-204ENST00000572778 PCBD2Q9H0N5 130 aa19.79■□□□□ 0.76
CHMP6-204ENST00000572778 TSPYL1Q9H0U9 437 aa19.79■□□□□ 0.76
CHMP6-204ENST00000572778 NINJ2Q9NZG7 142 aa19.79■□□□□ 0.76
CHMP6-204ENST00000572778 IFT80Q9P2H3 777 aaPredicted RBP19.79■□□□□ 0.76
CHMP6-204ENST00000572778 CTNNAL1Q9UBT7 734 aa19.79■□□□□ 0.76
CHMP6-204ENST00000572778 GPN3Q9UHW5 284 aaPredicted RBP19.79■□□□□ 0.76
CHMP6-204ENST00000572778 H7BY64 318 aa19.78■□□□□ 0.76
CHMP6-204ENST00000572778 CAPN1P07384 714 aa19.78■□□□□ 0.76
CHMP6-204ENST00000572778 FURINP09958 794 aa19.78■□□□□ 0.76
CHMP6-204ENST00000572778 CCND1P24385 295 aa19.78■□□□□ 0.76
CHMP6-204ENST00000572778 SLC9A5Q14940 896 aa19.78■□□□□ 0.76
CHMP6-204ENST00000572778 ZNF425Q6IV72 752 aa19.78■□□□□ 0.76
CHMP6-204ENST00000572778 CAPN13Q6MZZ7 669 aaPredicted RBP19.78■□□□□ 0.76
CHMP6-204ENST00000572778 SBSNQ6UWP8 590 aa19.78■□□□□ 0.76
CHMP6-204ENST00000572778 SYVN1Q86TM6 617 aa19.78■□□□□ 0.76
CHMP6-204ENST00000572778 SPATA6LQ8N4H0 392 aa19.78■□□□□ 0.76
CHMP6-204ENST00000572778 ANKRD7Q92527 254 aa19.78■□□□□ 0.76
CHMP6-204ENST00000572778 PYCR2Q96C36 320 aa19.78■□□□□ 0.76
CHMP6-204ENST00000572778 FBXL8Q96CD0 374 aa19.78■□□□□ 0.76
CHMP6-204ENST00000572778 ZNF285Q96NJ3 590 aa19.78■□□□□ 0.76
CHMP6-204ENST00000572778 PRAP1Q96NZ9 151 aa19.78■□□□□ 0.76
CHMP6-204ENST00000572778 C17orf62Q9BQA9 187 aa19.78■□□□□ 0.76
CHMP6-204ENST00000572778 FAM117AQ9C073 453 aa19.78■□□□□ 0.76
CHMP6-204ENST00000572778 UNKQ9C0B0 810 aaKnown RBP19.78■□□□□ 0.76
CHMP6-204ENST00000572778 CUTCQ9NTM9 273 aa19.78■□□□□ 0.76
CHMP6-204ENST00000572778 NOVA2Q9UNW9 492 aaKnown RBP19.78■□□□□ 0.76
CHMP6-204ENST00000572778 H0YGG7 62 aa19.77■□□□□ 0.76
CHMP6-204ENST00000572778 TK2O00142 265 aa19.77■□□□□ 0.76
CHMP6-204ENST00000572778 RECKO95980 971 aa19.77■□□□□ 0.76
CHMP6-204ENST00000572778 PRB1P04280 392 aa19.77■□□□□ 0.76
CHMP6-204ENST00000572778 EZRP15311 586 aaKnown RBP19.77■□□□□ 0.76
CHMP6-204ENST00000572778 CCR10P46092 362 aa19.77■□□□□ 0.76
CHMP6-204ENST00000572778 ARF3P61204 181 aaPredicted RBP19.77■□□□□ 0.76
CHMP6-204ENST00000572778 NFKB2Q00653 900 aa19.77■□□□□ 0.76
CHMP6-204ENST00000572778 SLMAPQ14BN4 828 aa19.77■□□□□ 0.76
CHMP6-204ENST00000572778 NCF4Q15080 339 aa19.77■□□□□ 0.76
CHMP6-204ENST00000572778 TSNQ15631 228 aaKnown RBP19.77■□□□□ 0.76
CHMP6-204ENST00000572778 PPP1R3AQ16821 1122 aa19.77■□□□□ 0.76
CHMP6-204ENST00000572778 FAM214AQ32MH5 1076 aa19.77■□□□□ 0.76
CHMP6-204ENST00000572778 NKAIN1Q4KMZ8 207 aa19.77■□□□□ 0.76
CHMP6-204ENST00000572778 FAM69BQ5VUD6 431 aa19.77■□□□□ 0.76
CHMP6-204ENST00000572778 YOD1Q5VVQ6 348 aaPredicted RBP19.77■□□□□ 0.76
CHMP6-204ENST00000572778 FRA10AC1Q70Z53 315 aa19.77■□□□□ 0.76
CHMP6-204ENST00000572778 C17orf64Q86WR6 236 aa19.77■□□□□ 0.76
CHMP6-204ENST00000572778 PLD3Q8IV08 490 aa19.77■□□□□ 0.76
CHMP6-204ENST00000572778 EXD3Q8N9H8 876 aa19.77■□□□□ 0.76
CHMP6-204ENST00000572778 ATL1Q8WXF7 558 aa19.77■□□□□ 0.76
CHMP6-204ENST00000572778 SGPP1Q9BX95 441 aa19.77■□□□□ 0.76
CHMP6-204ENST00000572778 TMEM184CQ9NVA4 438 aa19.77■□□□□ 0.76
CHMP6-204ENST00000572778 TCFL5Q9UL49 500 aa19.77■□□□□ 0.76
CHMP6-204ENST00000572778 MGAQ8IWI9 3026 aa19.77■□□□□ 0.76
CHMP6-204ENST00000572778 A0A1B0GX78 115 aa19.76■□□□□ 0.75
CHMP6-204ENST00000572778 HYKKA2RU49 373 aa19.76■□□□□ 0.75
CHMP6-204ENST00000572778 FITM1A5D6W6 292 aa19.76■□□□□ 0.75
CHMP6-204ENST00000572778 HAT1O14929 419 aa19.76■□□□□ 0.75
CHMP6-204ENST00000572778 DSCR3O14972 297 aa19.76■□□□□ 0.75
CHMP6-204ENST00000572778 RHOXF2BP0C7M4 288 aa19.76■□□□□ 0.75
CHMP6-204ENST00000572778 FAM87AP0C7U9 286 aa19.76■□□□□ 0.75
CHMP6-204ENST00000572778 CCDC166P0CW27 439 aa19.76■□□□□ 0.75
CHMP6-204ENST00000572778 HRH2P25021 359 aa19.76■□□□□ 0.75
CHMP6-204ENST00000572778 ECHS1P30084 290 aa19.76■□□□□ 0.75
CHMP6-204ENST00000572778 GCGRP47871 477 aa19.76■□□□□ 0.75
CHMP6-204ENST00000572778 RAB10P61026 200 aa19.76■□□□□ 0.75
CHMP6-204ENST00000572778 UAP1Q16222 522 aaPredicted RBP19.76■□□□□ 0.75
CHMP6-204ENST00000572778 UGT8Q16880 541 aa19.76■□□□□ 0.75
CHMP6-204ENST00000572778 ZXDCQ2QGD7 858 aaPredicted RBP19.76■□□□□ 0.75
CHMP6-204ENST00000572778 UBAP2Q5T6F2 1119 aaKnown RBP19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms