RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 PPANQ9NQ55 473 aaKnown RBP6.12□□□□□ -1.43
TCF4-228ENST00000565393 IARS2Q9NSE4 1012 aaKnown RBP6.12□□□□□ -1.43
TCF4-228ENST00000565393 TRMT1Q9NXH9 659 aaKnown RBP6.12□□□□□ -1.43
TCF4-228ENST00000565393 KLHL42Q9P2K6 505 aa6.12□□□□□ -1.43
TCF4-228ENST00000565393 CTSFQ9UBX1 484 aa6.12□□□□□ -1.43
TCF4-228ENST00000565393 TAC3Q9UHF0 121 aa6.12□□□□□ -1.43
TCF4-228ENST00000565393 PCYOX1Q9UHG3 505 aa6.12□□□□□ -1.43
TCF4-228ENST00000565393 C3orf18Q9UK00 162 aa6.12□□□□□ -1.43
TCF4-228ENST00000565393 FBXO5Q9UKT4 447 aa6.12□□□□□ -1.43
TCF4-228ENST00000565393 RUVBL1Q9Y265 456 aaKnown RBP6.12□□□□□ -1.43
TCF4-228ENST00000565393 DHRS7Q9Y394 339 aa6.12□□□□□ -1.43
TCF4-228ENST00000565393 LAMA5O15230 3695 aa6.12□□□□□ -1.43
TCF4-228ENST00000565393 A0A0A6YYC8 382 aaPredicted RBP6.11□□□□□ -1.43
TCF4-228ENST00000565393 NSG1A0A0A6YYJ2 146 aa6.11□□□□□ -1.43
TCF4-228ENST00000565393 GOLGA6L10A0A0M3HER8 536 aa6.11□□□□□ -1.43
TCF4-228ENST00000565393 ZCWPW2A0A1B0GU75 182 aa6.11□□□□□ -1.43
TCF4-228ENST00000565393 A1L4Q6 167 aa6.11□□□□□ -1.43
TCF4-228ENST00000565393 OR2A25A4D2G3 310 aa6.11□□□□□ -1.43
TCF4-228ENST00000565393 CLEC18AA5D8T8 446 aa6.11□□□□□ -1.43
TCF4-228ENST00000565393 PABPN1LA6NDY0 278 aaKnown RBP6.11□□□□□ -1.43
TCF4-228ENST00000565393 ANKUB1A6NFN9 424 aa6.11□□□□□ -1.43
TCF4-228ENST00000565393 VSTM2BA6NLU5 285 aa6.11□□□□□ -1.43
TCF4-228ENST00000565393 E7ENX8 843 aa6.11□□□□□ -1.43
TCF4-228ENST00000565393 I3L1I5 382 aaPredicted RBP6.11□□□□□ -1.43
TCF4-228ENST00000565393 MYO1CO00159 1063 aa6.11□□□□□ -1.43
TCF4-228ENST00000565393 PGRMC1O00264 195 aaKnown RBP6.11□□□□□ -1.43
TCF4-228ENST00000565393 TXNDC9O14530 226 aa6.11□□□□□ -1.43
TCF4-228ENST00000565393 MAP2K7O14733 419 aa6.11□□□□□ -1.43
TCF4-228ENST00000565393 ZSCAN12O43309 604 aa6.11□□□□□ -1.43
TCF4-228ENST00000565393 MED26O95402 600 aa6.11□□□□□ -1.43
TCF4-228ENST00000565393 STATHP02808 62 aa6.11□□□□□ -1.43
TCF4-228ENST00000565393 HIST1H2AGP0C0S8 130 aaPredicted RBP6.11□□□□□ -1.43
TCF4-228ENST00000565393 MPC1LP0DKB6 136 aa6.11□□□□□ -1.43
TCF4-228ENST00000565393 ENO3P13929 434 aaPredicted RBP6.11□□□□□ -1.43
TCF4-228ENST00000565393 ACPPP15309 386 aa6.11□□□□□ -1.43
TCF4-228ENST00000565393 HIST1H2ADP20671 130 aa6.11□□□□□ -1.43
TCF4-228ENST00000565393 SKIV2L2P42285 1042 aaKnown RBP6.11□□□□□ -1.43
TCF4-228ENST00000565393 MAGEA6P43360 314 aa6.11□□□□□ -1.43
TCF4-228ENST00000565393 GCGRP47871 477 aa6.11□□□□□ -1.43
TCF4-228ENST00000565393 AVPR1BP47901 424 aa6.11□□□□□ -1.43
TCF4-228ENST00000565393 ABATP80404 500 aa6.11□□□□□ -1.43
TCF4-228ENST00000565393 TAP2Q03519 686 aa6.11□□□□□ -1.43
TCF4-228ENST00000565393 CDC16Q13042 620 aa6.11□□□□□ -1.43
TCF4-228ENST00000565393 PTK6Q13882 451 aa6.11□□□□□ -1.43
TCF4-228ENST00000565393 GBX1Q14549 363 aa6.11□□□□□ -1.43
TCF4-228ENST00000565393 NDUFA9Q16795 377 aa6.11□□□□□ -1.43
TCF4-228ENST00000565393 HKDC1Q2TB90 917 aa6.11□□□□□ -1.43
TCF4-228ENST00000565393 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.11□□□□□ -1.43
TCF4-228ENST00000565393 HP1BP3Q5SSJ5 553 aaPredicted RBP6.11□□□□□ -1.43
TCF4-228ENST00000565393 MFSD4BQ5TF39 518 aa6.11□□□□□ -1.43
TCF4-228ENST00000565393 ARMC3Q5W041 872 aa6.11□□□□□ -1.43
TCF4-228ENST00000565393 HIST2H2BCQ6DN03 193 aa6.11□□□□□ -1.43
TCF4-228ENST00000565393 ZNF549Q6P9A3 640 aa6.11□□□□□ -1.43
TCF4-228ENST00000565393 CLEC18BQ6UXF7 455 aa6.11□□□□□ -1.43
TCF4-228ENST00000565393 ISLR2Q6UXK2 745 aa6.11□□□□□ -1.43
TCF4-228ENST00000565393 Q6ZS92 163 aa6.11□□□□□ -1.43
TCF4-228ENST00000565393 NEK10Q6ZWH5 1172 aa6.11□□□□□ -1.43
TCF4-228ENST00000565393 RNF44Q7L0R7 432 aa6.11□□□□□ -1.43
TCF4-228ENST00000565393 NDUFAF7Q7L592 441 aa6.11□□□□□ -1.43
TCF4-228ENST00000565393 PCGF5Q86SE9 256 aa6.11□□□□□ -1.43
TCF4-228ENST00000565393 CUZD1Q86UP6 607 aa6.11□□□□□ -1.43
TCF4-228ENST00000565393 PAQR7Q86WK9 346 aa6.11□□□□□ -1.43
TCF4-228ENST00000565393 PLD3Q8IV08 490 aa6.11□□□□□ -1.43
TCF4-228ENST00000565393 SPNS2Q8IVW8 549 aa6.11□□□□□ -1.43
TCF4-228ENST00000565393 LMNTD2Q8IXW0 634 aa6.11□□□□□ -1.43
TCF4-228ENST00000565393 KBTBD2Q8IY47 623 aa6.11□□□□□ -1.43
TCF4-228ENST00000565393 CPNE9Q8IYJ1 553 aa6.11□□□□□ -1.43
TCF4-228ENST00000565393 SLC35F6Q8N357 371 aa6.11□□□□□ -1.43
TCF4-228ENST00000565393 NAT8LQ8N9F0 302 aa6.11□□□□□ -1.43
TCF4-228ENST00000565393 CLEC18CQ8NCF0 446 aa6.11□□□□□ -1.43
TCF4-228ENST00000565393 OR11G2Q8NGC1 345 aa6.11□□□□□ -1.43
TCF4-228ENST00000565393 OR1N1Q8NGS0 311 aa6.11□□□□□ -1.43
TCF4-228ENST00000565393 COG1Q8WTW3 980 aa6.11□□□□□ -1.43
TCF4-228ENST00000565393 ZNF480Q8WV37 535 aa6.11□□□□□ -1.43
TCF4-228ENST00000565393 EEF1AKMT1Q8WVE0 214 aa6.11□□□□□ -1.43
TCF4-228ENST00000565393 KCNJ9Q92806 393 aa6.11□□□□□ -1.43
TCF4-228ENST00000565393 C8orf44Q96CB5 159 aa6.11□□□□□ -1.43
TCF4-228ENST00000565393 HIST1H2AHQ96KK5 128 aa6.11□□□□□ -1.43
TCF4-228ENST00000565393 SIGLEC10Q96LC7 697 aa6.11□□□□□ -1.43
TCF4-228ENST00000565393 CCDC138Q96M89 665 aa6.11□□□□□ -1.43
TCF4-228ENST00000565393 ZNF285Q96NJ3 590 aa6.11□□□□□ -1.43
TCF4-228ENST00000565393 SERPINB12Q96P63 405 aa6.11□□□□□ -1.43
TCF4-228ENST00000565393 OR2A5Q96R48 311 aa6.11□□□□□ -1.43
TCF4-228ENST00000565393 LMF1Q96S06 567 aa6.11□□□□□ -1.43
TCF4-228ENST00000565393 OSBPL9Q96SU4 736 aa6.11□□□□□ -1.43
TCF4-228ENST00000565393 GPR21Q99679 349 aa6.11□□□□□ -1.43
TCF4-228ENST00000565393 HIST1H2AJQ99878 128 aa6.11□□□□□ -1.43
TCF4-228ENST00000565393 WDR77Q9BQA1 342 aaPredicted RBP6.11□□□□□ -1.43
TCF4-228ENST00000565393 FAM167BQ9BTA0 163 aa6.11□□□□□ -1.43
TCF4-228ENST00000565393 H2AFJQ9BTM1 129 aa6.11□□□□□ -1.43
TCF4-228ENST00000565393 TRIM54Q9BYV2 358 aa6.11□□□□□ -1.43
TCF4-228ENST00000565393 TMEM184CQ9NVA4 438 aa6.11□□□□□ -1.43
TCF4-228ENST00000565393 PLA2G3Q9NZ20 509 aa6.11□□□□□ -1.43
TCF4-228ENST00000565393 PLEKHB1Q9UF11 243 aaPredicted RBP6.11□□□□□ -1.43
TCF4-228ENST00000565393 ASIC3Q9UHC3 531 aa6.11□□□□□ -1.43
TCF4-228ENST00000565393 TRMT6Q9UJA5 497 aaKnown RBP6.11□□□□□ -1.43
TCF4-228ENST00000565393 MKL2Q9ULH7 1088 aa6.11□□□□□ -1.43
TCF4-228ENST00000565393 KLK4Q9Y5K2 254 aa6.11□□□□□ -1.43
TCF4-228ENST00000565393 HS3ST3B1Q9Y662 390 aa6.11□□□□□ -1.43
TCF4-228ENST00000565393 COMMD10Q9Y6G5 202 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms