RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 AP2B1P63010 937 aa11.62□□□□□ -0.55
GTF3C1-204ENST00000564664 KLC1Q07866 573 aa11.62□□□□□ -0.55
GTF3C1-204ENST00000564664 FASTKQ14296 549 aaKnown RBP11.62□□□□□ -0.55
GTF3C1-204ENST00000564664 TRIP13Q15645 432 aaPredicted RBP11.62□□□□□ -0.55
GTF3C1-204ENST00000564664 LONRF1Q17RB8 773 aa11.62□□□□□ -0.55
GTF3C1-204ENST00000564664 EIF2S3LQ2VIR3 472 aaKnown RBP11.62□□□□□ -0.55
GTF3C1-204ENST00000564664 C4orf17Q53FE4 359 aa11.62□□□□□ -0.55
GTF3C1-204ENST00000564664 B3GNTL1Q67FW5 361 aaPredicted RBP11.62□□□□□ -0.55
GTF3C1-204ENST00000564664 ZNF470Q6ECI4 717 aa11.62□□□□□ -0.55
GTF3C1-204ENST00000564664 FRMPD2BQ6IN97 320 aa11.62□□□□□ -0.55
GTF3C1-204ENST00000564664 LRRC8EQ6NSJ5 796 aa11.62□□□□□ -0.55
GTF3C1-204ENST00000564664 UGT3A1Q6NUS8 523 aa11.62□□□□□ -0.55
GTF3C1-204ENST00000564664 PAQR7Q86WK9 346 aa11.62□□□□□ -0.55
GTF3C1-204ENST00000564664 REXO1L1PQ8IX06 675 aa11.62□□□□□ -0.55
GTF3C1-204ENST00000564664 OR4N4Q8N0Y3 316 aa11.62□□□□□ -0.55
GTF3C1-204ENST00000564664 OR11G2Q8NGC1 345 aa11.62□□□□□ -0.55
GTF3C1-204ENST00000564664 DNAJB14Q8TBM8 379 aa11.62□□□□□ -0.55
GTF3C1-204ENST00000564664 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.62□□□□□ -0.55
GTF3C1-204ENST00000564664 RERGQ96A58 199 aaPredicted RBP11.62□□□□□ -0.55
GTF3C1-204ENST00000564664 C19orf60Q96EN9 201 aa11.62□□□□□ -0.55
GTF3C1-204ENST00000564664 CABS1Q96KC9 395 aa11.62□□□□□ -0.55
GTF3C1-204ENST00000564664 SERPINB12Q96P63 405 aa11.62□□□□□ -0.55
GTF3C1-204ENST00000564664 PKP4Q99569 1192 aa11.62□□□□□ -0.55
GTF3C1-204ENST00000564664 CRB3Q9BUF7 120 aa11.62□□□□□ -0.55
GTF3C1-204ENST00000564664 TGIF2Q9GZN2 237 aa11.62□□□□□ -0.55
GTF3C1-204ENST00000564664 PCBD2Q9H0N5 130 aa11.62□□□□□ -0.55
GTF3C1-204ENST00000564664 SOX17Q9H6I2 414 aaPredicted RBP11.62□□□□□ -0.55
GTF3C1-204ENST00000564664 EPS8L2Q9H6S3 715 aa11.62□□□□□ -0.55
GTF3C1-204ENST00000564664 C14orf105Q9NVL8 296 aa11.62□□□□□ -0.55
GTF3C1-204ENST00000564664 ASF1BQ9NVP2 202 aa11.62□□□□□ -0.55
GTF3C1-204ENST00000564664 CTSFQ9UBX1 484 aa11.62□□□□□ -0.55
GTF3C1-204ENST00000564664 NEU2Q9Y3R4 380 aa11.62□□□□□ -0.55
GTF3C1-204ENST00000564664 PCDHGA10Q9Y5H3 936 aa11.62□□□□□ -0.55
GTF3C1-204ENST00000564664 POLEQ07864 2286 aa11.62□□□□□ -0.55
GTF3C1-204ENST00000564664 HIVEP3Q5T1R4 2406 aa11.61□□□□□ -0.55
GTF3C1-204ENST00000564664 DOCK10Q96BY6 2186 aa11.61□□□□□ -0.55
GTF3C1-204ENST00000564664 A0A1W2PQ72 361 aa11.61□□□□□ -0.55
GTF3C1-204ENST00000564664 WIPF3A6NGB9 483 aa11.61□□□□□ -0.55
GTF3C1-204ENST00000564664 E7ENX8 843 aa11.61□□□□□ -0.55
GTF3C1-204ENST00000564664 MAP2K7O14733 419 aa11.61□□□□□ -0.55
GTF3C1-204ENST00000564664 SEMA7AO75326 666 aa11.61□□□□□ -0.55
GTF3C1-204ENST00000564664 SLC16A8O95907 504 aa11.61□□□□□ -0.55
GTF3C1-204ENST00000564664 ANXA5P08758 320 aa11.61□□□□□ -0.55
GTF3C1-204ENST00000564664 ATXN8OSP0DMR3 200 aa11.61□□□□□ -0.55
GTF3C1-204ENST00000564664 ICAM2P13598 275 aa11.61□□□□□ -0.55
GTF3C1-204ENST00000564664 ACPPP15309 386 aa11.61□□□□□ -0.55
GTF3C1-204ENST00000564664 FBLP22087 321 aaKnown RBP11.61□□□□□ -0.55
GTF3C1-204ENST00000564664 CXCR2P25025 360 aa11.61□□□□□ -0.55
GTF3C1-204ENST00000564664 SLC26A3P40879 764 aa11.61□□□□□ -0.55
GTF3C1-204ENST00000564664 MAGEA3P43357 314 aa11.61□□□□□ -0.55
GTF3C1-204ENST00000564664 TSFMP43897 325 aaKnown RBP11.61□□□□□ -0.55
GTF3C1-204ENST00000564664 GLRBP48167 497 aa11.61□□□□□ -0.55
GTF3C1-204ENST00000564664 FNTAP49354 379 aa11.61□□□□□ -0.55
GTF3C1-204ENST00000564664 VPS41P49754 854 aa11.61□□□□□ -0.55
GTF3C1-204ENST00000564664 EMP2P54851 167 aa11.61□□□□□ -0.55
GTF3C1-204ENST00000564664 CCZ1BP86790 482 aa11.61□□□□□ -0.55
GTF3C1-204ENST00000564664 CCZ1P86791 482 aaPredicted RBP11.61□□□□□ -0.55
GTF3C1-204ENST00000564664 TAP2Q03519 686 aa11.61□□□□□ -0.55
GTF3C1-204ENST00000564664 PTK6Q13882 451 aa11.61□□□□□ -0.55
GTF3C1-204ENST00000564664 DSG2Q14126 1118 aa11.61□□□□□ -0.55
GTF3C1-204ENST00000564664 FAM53BQ14153 422 aa11.61□□□□□ -0.55
GTF3C1-204ENST00000564664 ELOAQ14241 798 aaKnown RBP11.61□□□□□ -0.55
GTF3C1-204ENST00000564664 TLR1Q15399 786 aa11.61□□□□□ -0.55
GTF3C1-204ENST00000564664 NDUFA9Q16795 377 aa11.61□□□□□ -0.55
GTF3C1-204ENST00000564664 PRR30Q53SZ7 412 aaPredicted RBP11.61□□□□□ -0.55
GTF3C1-204ENST00000564664 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.61□□□□□ -0.55
GTF3C1-204ENST00000564664 ICE2Q659A1 982 aa11.61□□□□□ -0.55
GTF3C1-204ENST00000564664 ZNF425Q6IV72 752 aa11.61□□□□□ -0.55
GTF3C1-204ENST00000564664 RPUSD3Q6P087 351 aaKnown RBP11.61□□□□□ -0.55
GTF3C1-204ENST00000564664 TTC27Q6P3X3 843 aa11.61□□□□□ -0.55
GTF3C1-204ENST00000564664 CCDC137Q6PK04 289 aaKnown RBP11.61□□□□□ -0.55
GTF3C1-204ENST00000564664 ISLR2Q6UXK2 745 aa11.61□□□□□ -0.55
GTF3C1-204ENST00000564664 CYHR1Q6ZMK1 362 aa11.61□□□□□ -0.55
GTF3C1-204ENST00000564664 NDUFAF7Q7L592 441 aa11.61□□□□□ -0.55
GTF3C1-204ENST00000564664 CUZD1Q86UP6 607 aa11.61□□□□□ -0.55
GTF3C1-204ENST00000564664 KBTBD2Q8IY47 623 aa11.61□□□□□ -0.55
GTF3C1-204ENST00000564664 CSNK1A1LQ8N752 337 aa11.61□□□□□ -0.55
GTF3C1-204ENST00000564664 PRR7Q8TB68 274 aa11.61□□□□□ -0.55
GTF3C1-204ENST00000564664 ZNF669Q96BR6 464 aaPredicted RBP11.61□□□□□ -0.55
GTF3C1-204ENST00000564664 THAP11Q96EK4 314 aa11.61□□□□□ -0.55
GTF3C1-204ENST00000564664 OR2A5Q96R48 311 aa11.61□□□□□ -0.55
GTF3C1-204ENST00000564664 ACAT2Q9BWD1 397 aa11.61□□□□□ -0.55
GTF3C1-204ENST00000564664 FAM129AQ9BZQ8 928 aa11.61□□□□□ -0.55
GTF3C1-204ENST00000564664 MKKSQ9NPJ1 570 aaPredicted RBP11.61□□□□□ -0.55
GTF3C1-204ENST00000564664 LUZP4Q9P127 313 aa11.61□□□□□ -0.55
GTF3C1-204ENST00000564664 GALPQ9UBC7 116 aa11.61□□□□□ -0.55
GTF3C1-204ENST00000564664 PLEKHB1Q9UF11 243 aaPredicted RBP11.61□□□□□ -0.55
GTF3C1-204ENST00000564664 C3orf18Q9UK00 162 aa11.61□□□□□ -0.55
GTF3C1-204ENST00000564664 RUVBL2Q9Y230 463 aaKnown RBP11.61□□□□□ -0.55
GTF3C1-204ENST00000564664 MAU2Q9Y6X3 613 aa11.61□□□□□ -0.55
GTF3C1-204ENST00000564664 HEATR5BQ9P2D3 2071 aa11.6□□□□□ -0.55
GTF3C1-204ENST00000564664 KCNE1BA0A087WTH5 132 aa11.6□□□□□ -0.55
GTF3C1-204ENST00000564664 GOLGA6L10A0A0M3HER8 536 aa11.6□□□□□ -0.55
GTF3C1-204ENST00000564664 ANKUB1A6NFN9 424 aa11.6□□□□□ -0.55
GTF3C1-204ENST00000564664 PGRMC1O00264 195 aaKnown RBP11.6□□□□□ -0.55
GTF3C1-204ENST00000564664 CES2O00748 559 aa11.6□□□□□ -0.55
GTF3C1-204ENST00000564664 TTC4O95801 387 aa11.6□□□□□ -0.55
GTF3C1-204ENST00000564664 CYC1P08574 325 aa11.6□□□□□ -0.55
GTF3C1-204ENST00000564664 MYBL2P10244 700 aa11.6□□□□□ -0.55
GTF3C1-204ENST00000564664 FOXL2P58012 376 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms