RNA–Protein interactions for RNA: ENST00000562914.1

HERPUD1-205, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-205ENST00000562914 SKA2Q8WVK7 121 aaPredicted RBP14.98□□□□□ -0.01
HERPUD1-205ENST00000562914 C10orf90Q96M02 699 aa14.98□□□□□ -0.01
HERPUD1-205ENST00000562914 TUBB6Q9BUF5 446 aa14.98□□□□□ -0.01
HERPUD1-205ENST00000562914 ZNF700Q9H0M5 742 aa14.98□□□□□ -0.01
HERPUD1-205ENST00000562914 CATSPERZQ9NTU4 200 aa14.98□□□□□ -0.01
HERPUD1-205ENST00000562914 PLA2G3Q9NZ20 509 aa14.98□□□□□ -0.01
HERPUD1-205ENST00000562914 CIDEBQ9UHD4 219 aa14.98□□□□□ -0.01
HERPUD1-205ENST00000562914 IQCF5A8MTL0 148 aa14.97□□□□□ -0.01
HERPUD1-205ENST00000562914 E7EVH7 732 aa14.97□□□□□ -0.01
HERPUD1-205ENST00000562914 PRAMEF2O60811 474 aa14.97□□□□□ -0.01
HERPUD1-205ENST00000562914 MED26O95402 600 aa14.97□□□□□ -0.01
HERPUD1-205ENST00000562914 WDPCPO95876 746 aa14.97□□□□□ -0.01
HERPUD1-205ENST00000562914 ANXA5P08758 320 aa14.97□□□□□ -0.01
HERPUD1-205ENST00000562914 PKMP14618 531 aaKnown RBP14.97□□□□□ -0.01
HERPUD1-205ENST00000562914 RPS3P23396 243 aaKnown RBP eCLIP14.97□□□□□ -0.014e-7■■□□□ 12.8
HERPUD1-205ENST00000562914 SLC26A3P40879 764 aa14.97□□□□□ -0.01
HERPUD1-205ENST00000562914 AADACL2Q6P093 401 aa14.97□□□□□ -0.01
HERPUD1-205ENST00000562914 LAPTM4BQ86VI4 370 aa14.97□□□□□ -0.01
HERPUD1-205ENST00000562914 PPHLN1Q8NEY8 458 aaKnown RBP14.97□□□□□ -0.01
HERPUD1-205ENST00000562914 LKAAEAR1Q8TD35 194 aa14.97□□□□□ -0.01
HERPUD1-205ENST00000562914 MESP1Q9BRJ9 268 aa14.97□□□□□ -0.01
HERPUD1-205ENST00000562914 DPH7Q9BTV6 452 aa14.97□□□□□ -0.01
HERPUD1-205ENST00000562914 FRMD8P1Q9BZ68 369 aaPredicted RBP14.97□□□□□ -0.01
HERPUD1-205ENST00000562914 SLC2A6Q9UGQ3 507 aa14.97□□□□□ -0.01
HERPUD1-205ENST00000562914 AMFRQ9UKV5 643 aa14.97□□□□□ -0.01
HERPUD1-205ENST00000562914 TCAF1Q9Y4C2 921 aa14.97□□□□□ -0.01
HERPUD1-205ENST00000562914 EPN1Q9Y6I3 576 aaPredicted RBP14.97□□□□□ -0.01
HERPUD1-205ENST00000562914 FBN2P35556 2912 aa14.96□□□□□ -0.01
HERPUD1-205ENST00000562914 A0A1W2PPV9 198 aa14.96□□□□□ -0.01
HERPUD1-205ENST00000562914 SLC19A2O60779 497 aa14.96□□□□□ -0.01
HERPUD1-205ENST00000562914 CCNDBP1O95273 360 aa14.96□□□□□ -0.01
HERPUD1-205ENST00000562914 CAPN3P20807 821 aa14.96□□□□□ -0.01
HERPUD1-205ENST00000562914 PSMB5P28074 263 aa14.96□□□□□ -0.01
HERPUD1-205ENST00000562914 ATP5DP30049 168 aa14.96□□□□□ -0.01
HERPUD1-205ENST00000562914 SSTR2P30874 369 aa14.96□□□□□ -0.01
HERPUD1-205ENST00000562914 HSD17B2P37059 387 aa14.96□□□□□ -0.01
HERPUD1-205ENST00000562914 EEF1A2Q05639 463 aaKnown RBP14.96□□□□□ -0.01
HERPUD1-205ENST00000562914 FAM53BQ14153 422 aa14.96□□□□□ -0.01
HERPUD1-205ENST00000562914 SEMA3AQ14563 771 aa14.96□□□□□ -0.01
HERPUD1-205ENST00000562914 ARHGAP19Q14CB8 494 aa14.96□□□□□ -0.01
HERPUD1-205ENST00000562914 FBXO42Q6P3S6 717 aa14.96□□□□□ -0.01
HERPUD1-205ENST00000562914 TMEM205Q6UW68 189 aa14.96□□□□□ -0.01
HERPUD1-205ENST00000562914 SYCE1Q8N0S2 351 aa14.96□□□□□ -0.01
HERPUD1-205ENST00000562914 KRT222Q8N1A0 295 aa14.96□□□□□ -0.01
HERPUD1-205ENST00000562914 DTWD1Q8N5C7 304 aa14.96□□□□□ -0.01
HERPUD1-205ENST00000562914 LRRC57Q8N9N7 239 aa14.96□□□□□ -0.01
HERPUD1-205ENST00000562914 THAP3Q8WTV1 239 aaPredicted RBP14.96□□□□□ -0.01
HERPUD1-205ENST00000562914 ZNF778Q96MU6 729 aa14.96□□□□□ -0.01
HERPUD1-205ENST00000562914 PLCD4Q9BRC7 762 aa14.96□□□□□ -0.01
HERPUD1-205ENST00000562914 YIPF2Q9BWQ6 316 aa14.96□□□□□ -0.01
HERPUD1-205ENST00000562914 P2RY12Q9H244 342 aa14.96□□□□□ -0.01
HERPUD1-205ENST00000562914 STMN3Q9NZ72 180 aa14.96□□□□□ -0.01
HERPUD1-205ENST00000562914 RCCD1A6NED2 376 aa14.95□□□□□ -0.02
HERPUD1-205ENST00000562914 ZNF839A8K0R7 811 aa14.95□□□□□ -0.02
HERPUD1-205ENST00000562914 H0YGG7 62 aa14.95□□□□□ -0.02
HERPUD1-205ENST00000562914 AP3B1O00203 1094 aa14.95□□□□□ -0.02
HERPUD1-205ENST00000562914 PFDN6O15212 129 aa14.95□□□□□ -0.02
HERPUD1-205ENST00000562914 CD3EAPO15446 510 aaKnown RBP14.95□□□□□ -0.02
HERPUD1-205ENST00000562914 ERGP11308 486 aa14.95□□□□□ -0.02
HERPUD1-205ENST00000562914 ESRRAP11474 423 aaPredicted RBP14.95□□□□□ -0.02
HERPUD1-205ENST00000562914 EZRP15311 586 aaKnown RBP14.95□□□□□ -0.02
HERPUD1-205ENST00000562914 MST1P26927 711 aa14.95□□□□□ -0.02
HERPUD1-205ENST00000562914 BDKRB1P46663 353 aa14.95□□□□□ -0.02
HERPUD1-205ENST00000562914 ARF3P61204 181 aaPredicted RBP14.95□□□□□ -0.02
HERPUD1-205ENST00000562914 PCOLCEQ15113 449 aa14.95□□□□□ -0.02
HERPUD1-205ENST00000562914 KRTCAP3Q53RY4 240 aa14.95□□□□□ -0.02
HERPUD1-205ENST00000562914 PCID2Q5JVF3 399 aa14.95□□□□□ -0.02
HERPUD1-205ENST00000562914 PEX26Q7Z412 305 aa14.95□□□□□ -0.02
HERPUD1-205ENST00000562914 CSNK1A1LQ8N752 337 aa14.95□□□□□ -0.02
HERPUD1-205ENST00000562914 AMER3Q8N944 861 aa14.95□□□□□ -0.02
HERPUD1-205ENST00000562914 METTL21AQ8WXB1 218 aa14.95□□□□□ -0.02
HERPUD1-205ENST00000562914 SMPDL3AQ92484 453 aa14.95□□□□□ -0.02
HERPUD1-205ENST00000562914 RERGQ96A58 199 aaPredicted RBP14.95□□□□□ -0.02
HERPUD1-205ENST00000562914 MMABQ96EY8 250 aaPredicted RBP14.95□□□□□ -0.02
HERPUD1-205ENST00000562914 IMMP1LQ96LU5 166 aa14.95□□□□□ -0.02
HERPUD1-205ENST00000562914 TRIM8Q9BZR9 551 aa14.95□□□□□ -0.02
HERPUD1-205ENST00000562914 DRC3Q9H069 523 aa14.95□□□□□ -0.02
HERPUD1-205ENST00000562914 ETNK1Q9HBU6 452 aa14.95□□□□□ -0.02
HERPUD1-205ENST00000562914 MRPS30Q9NP92 439 aaKnown RBP14.95□□□□□ -0.02
HERPUD1-205ENST00000562914 C19orf25Q9UFG5 118 aaPredicted RBP14.95□□□□□ -0.02
HERPUD1-205ENST00000562914 RUVBL1Q9Y265 456 aaKnown RBP14.95□□□□□ -0.02
HERPUD1-205ENST00000562914 NFS1Q9Y697 457 aa14.95□□□□□ -0.02
HERPUD1-205ENST00000562914 CSMD2Q7Z408 3487 aa14.94□□□□□ -0.02
HERPUD1-205ENST00000562914 H3BMM5 538 aa14.94□□□□□ -0.02
HERPUD1-205ENST00000562914 CDK2AP1O14519 115 aa14.94□□□□□ -0.02
HERPUD1-205ENST00000562914 NDUFS3O75489 264 aa14.94□□□□□ -0.02
HERPUD1-205ENST00000562914 MATN4O95460 622 aa14.94□□□□□ -0.02
HERPUD1-205ENST00000562914 C8orf89P0DMQ9 161 aa14.94□□□□□ -0.02
HERPUD1-205ENST00000562914 ITGAMP11215 1152 aa14.94□□□□□ -0.02
HERPUD1-205ENST00000562914 RPA3P35244 121 aaPredicted RBP14.94□□□□□ -0.02
HERPUD1-205ENST00000562914 ZNF33BQ06732 778 aa14.94□□□□□ -0.02
HERPUD1-205ENST00000562914 NDUFA9Q16795 377 aa14.94□□□□□ -0.02
HERPUD1-205ENST00000562914 ANKRD20A4Q4UJ75 823 aa14.94□□□□□ -0.02
HERPUD1-205ENST00000562914 OR9A1PQ8NGU1 263 aa14.94□□□□□ -0.02
HERPUD1-205ENST00000562914 MAGED4Q96JG8 741 aa14.94□□□□□ -0.02
HERPUD1-205ENST00000562914 ZNF354BQ96LW1 612 aa14.94□□□□□ -0.02
HERPUD1-205ENST00000562914 PANX2Q96RD6 677 aa14.94□□□□□ -0.02
HERPUD1-205ENST00000562914 GPAMQ9HCL2 828 aa14.94□□□□□ -0.02
HERPUD1-205ENST00000562914 FAM114A2Q9NRY5 505 aa14.94□□□□□ -0.02
HERPUD1-205ENST00000562914 MKL2Q9ULH7 1088 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms