RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 CMPK1P30085 196 aa13.31□□□□□ -0.28
TPM1-230ENST00000561266 HSD17B2P37059 387 aa13.31□□□□□ -0.28
TPM1-230ENST00000561266 UCNP55089 124 aa13.31□□□□□ -0.28
TPM1-230ENST00000561266 VSX2P58304 361 aaPredicted RBP13.31□□□□□ -0.28
TPM1-230ENST00000561266 RAB10P61026 200 aa13.31□□□□□ -0.28
TPM1-230ENST00000561266 IRF9Q00978 393 aa13.31□□□□□ -0.28
TPM1-230ENST00000561266 CSHL1Q14406 222 aa13.31□□□□□ -0.28
TPM1-230ENST00000561266 SLMAPQ14BN4 828 aa13.31□□□□□ -0.28
TPM1-230ENST00000561266 FBXO48Q5FWF7 155 aa13.31□□□□□ -0.28
TPM1-230ENST00000561266 FAM198BQ6UWH4 519 aa13.31□□□□□ -0.28
TPM1-230ENST00000561266 IFT20Q8IY31 132 aa13.31□□□□□ -0.28
TPM1-230ENST00000561266 SHISA5Q8N114 240 aa13.31□□□□□ -0.28
TPM1-230ENST00000561266 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.31□□□□□ -0.28
TPM1-230ENST00000561266 SLC44A1Q8WWI5 657 aa13.31□□□□□ -0.28
TPM1-230ENST00000561266 TTC9Q92623 222 aa13.31□□□□□ -0.28
TPM1-230ENST00000561266 MR1Q95460 341 aa13.31□□□□□ -0.28
TPM1-230ENST00000561266 FBXL8Q96CD0 374 aa13.31□□□□□ -0.28
TPM1-230ENST00000561266 CLIP3Q96DZ5 547 aa13.31□□□□□ -0.28
TPM1-230ENST00000561266 MED8Q96G25 268 aa13.31□□□□□ -0.28
TPM1-230ENST00000561266 SLC45A3Q96JT2 553 aa13.31□□□□□ -0.28
TPM1-230ENST00000561266 LRFN5Q96NI6 719 aa13.31□□□□□ -0.28
TPM1-230ENST00000561266 PRAP1Q96NZ9 151 aa13.31□□□□□ -0.28
TPM1-230ENST00000561266 DERL2Q9GZP9 239 aa13.31□□□□□ -0.28
TPM1-230ENST00000561266 ANKZF1Q9H8Y5 726 aa13.31□□□□□ -0.28
TPM1-230ENST00000561266 FANCEQ9HB96 536 aa13.31□□□□□ -0.28
TPM1-230ENST00000561266 SLC22A11Q9NSA0 550 aa13.31□□□□□ -0.28
TPM1-230ENST00000561266 IGSF5Q9NSI5 407 aa13.31□□□□□ -0.28
TPM1-230ENST00000561266 ARL15Q9NXU5 204 aa13.31□□□□□ -0.28
TPM1-230ENST00000561266 TXNDC16Q9P2K2 825 aa13.31□□□□□ -0.28
TPM1-230ENST00000561266 NOVA2Q9UNW9 492 aaKnown RBP13.31□□□□□ -0.28
TPM1-230ENST00000561266 H0YGG7 62 aa13.3□□□□□ -0.28
TPM1-230ENST00000561266 TAPBPO15533 448 aa13.3□□□□□ -0.28
TPM1-230ENST00000561266 ZSCAN9O15535 394 aaPredicted RBP13.3□□□□□ -0.28
TPM1-230ENST00000561266 P2RX6O15547 441 aa13.3□□□□□ -0.28
TPM1-230ENST00000561266 FKBP9O95302 570 aa13.3□□□□□ -0.28
TPM1-230ENST00000561266 GDF5P43026 501 aa13.3□□□□□ -0.28
TPM1-230ENST00000561266 SLC12A2P55011 1212 aa13.3□□□□□ -0.28
TPM1-230ENST00000561266 ARF3P61204 181 aaPredicted RBP13.3□□□□□ -0.28
TPM1-230ENST00000561266 CSNK1G2P78368 415 aa13.3□□□□□ -0.28
TPM1-230ENST00000561266 NAB1Q13506 487 aa13.3□□□□□ -0.28
TPM1-230ENST00000561266 DNASE1L3Q13609 305 aa13.3□□□□□ -0.28
TPM1-230ENST00000561266 UAP1Q16222 522 aaPredicted RBP13.3□□□□□ -0.28
TPM1-230ENST00000561266 LINC00303Q3SY05 128 aa13.3□□□□□ -0.28
TPM1-230ENST00000561266 WASHC2DQ5SRD0 308 aa13.3□□□□□ -0.28
TPM1-230ENST00000561266 PRAMEF13Q5VWM6 474 aa13.3□□□□□ -0.28
TPM1-230ENST00000561266 CYB5D1Q6P9G0 228 aa13.3□□□□□ -0.28
TPM1-230ENST00000561266 CENPLQ8N0S6 344 aaPredicted RBP13.3□□□□□ -0.28
TPM1-230ENST00000561266 ARHGEF39Q8N4T4 335 aa13.3□□□□□ -0.28
TPM1-230ENST00000561266 DCAKDQ8WVC6 231 aa13.3□□□□□ -0.28
TPM1-230ENST00000561266 KCTD4Q8WVF5 259 aa13.3□□□□□ -0.28
TPM1-230ENST00000561266 ANKRD7Q92527 254 aa13.3□□□□□ -0.28
TPM1-230ENST00000561266 ESAMQ96AP7 390 aa13.3□□□□□ -0.28
TPM1-230ENST00000561266 NXNL1Q96CM4 212 aa13.3□□□□□ -0.28
TPM1-230ENST00000561266 GBP5Q96PP8 586 aa13.3□□□□□ -0.28
TPM1-230ENST00000561266 OR2A5Q96R48 311 aa13.3□□□□□ -0.28
TPM1-230ENST00000561266 CYTH2Q99418 400 aa13.3□□□□□ -0.28
TPM1-230ENST00000561266 MACROD1Q9BQ69 325 aa13.3□□□□□ -0.28
TPM1-230ENST00000561266 SPNS1Q9H2V7 528 aa13.3□□□□□ -0.28
TPM1-230ENST00000561266 CCDC177Q9NQR7 707 aaPredicted RBP13.3□□□□□ -0.28
TPM1-230ENST00000561266 CTNNAL1Q9UBT7 734 aa13.3□□□□□ -0.28
TPM1-230ENST00000561266 OARD1Q9Y530 152 aa13.3□□□□□ -0.28
TPM1-230ENST00000561266 ASB1Q9Y576 335 aa13.3□□□□□ -0.28
TPM1-230ENST00000561266 FEZF1A0PJY2 475 aa13.29□□□□□ -0.28
TPM1-230ENST00000561266 FITM1A5D6W6 292 aa13.29□□□□□ -0.28
TPM1-230ENST00000561266 NCF1BA6NI72 391 aaPredicted RBP13.29□□□□□ -0.28
TPM1-230ENST00000561266 ZNF839A8K0R7 811 aa13.29□□□□□ -0.28
TPM1-230ENST00000561266 NCF1CA8MVU1 366 aaPredicted RBP13.29□□□□□ -0.28
TPM1-230ENST00000561266 ESPNB1AK53 854 aa13.29□□□□□ -0.28
TPM1-230ENST00000561266 MAP3K7O43318 606 aa13.29□□□□□ -0.28
TPM1-230ENST00000561266 LCMT2O60294 686 aaKnown RBP13.29□□□□□ -0.28
TPM1-230ENST00000561266 KATNA1O75449 491 aa13.29□□□□□ -0.28
TPM1-230ENST00000561266 ALDOAP04075 364 aaKnown RBP13.29□□□□□ -0.28
TPM1-230ENST00000561266 C2P06681 752 aa13.29□□□□□ -0.28
TPM1-230ENST00000561266 ENO2P09104 434 aaPredicted RBP13.29□□□□□ -0.28
TPM1-230ENST00000561266 HIST1H2AGP0C0S8 130 aaPredicted RBP13.29□□□□□ -0.28
TPM1-230ENST00000561266 CCNYL3P0C7X3 344 aa13.29□□□□□ -0.28
TPM1-230ENST00000561266 PRKAR1AP10644 381 aa13.29□□□□□ -0.28
TPM1-230ENST00000561266 CDH1P12830 882 aa13.29□□□□□ -0.28
TPM1-230ENST00000561266 NCF1P14598 390 aaPredicted RBP13.29□□□□□ -0.28
TPM1-230ENST00000561266 HIST1H2ADP20671 130 aa13.29□□□□□ -0.28
TPM1-230ENST00000561266 AP1S2P56377 157 aa13.29□□□□□ -0.28
TPM1-230ENST00000561266 MEF2AQ02078 507 aaPredicted RBP13.29□□□□□ -0.28
TPM1-230ENST00000561266 SLC9A5Q14940 896 aa13.29□□□□□ -0.28
TPM1-230ENST00000561266 HKDC1Q2TB90 917 aa13.29□□□□□ -0.28
TPM1-230ENST00000561266 PRTGQ2VWP7 1150 aa13.29□□□□□ -0.28
TPM1-230ENST00000561266 ZC3H12BQ5HYM0 836 aaKnown RBP13.29□□□□□ -0.28
TPM1-230ENST00000561266 CATSPEREQ5SY80 951 aa13.29□□□□□ -0.28
TPM1-230ENST00000561266 THEMIS2Q5TEJ8 643 aa13.29□□□□□ -0.28
TPM1-230ENST00000561266 RHBDD2Q6NTF9 364 aa13.29□□□□□ -0.28
TPM1-230ENST00000561266 ISCA2Q86U28 154 aa13.29□□□□□ -0.28
TPM1-230ENST00000561266 GPR135Q8IZ08 494 aa13.29□□□□□ -0.28
TPM1-230ENST00000561266 PLD6Q8N2A8 252 aaKnown RBP13.29□□□□□ -0.28
TPM1-230ENST00000561266 ZNF740Q8NDX6 193 aa13.29□□□□□ -0.28
TPM1-230ENST00000561266 STARD8Q92502 1023 aa13.29□□□□□ -0.28
TPM1-230ENST00000561266 N4BP2L2Q92802 583 aaPredicted RBP13.29□□□□□ -0.28
TPM1-230ENST00000561266 TSPAN17Q96FV3 270 aa13.29□□□□□ -0.28
TPM1-230ENST00000561266 HIST1H2AHQ96KK5 128 aa13.29□□□□□ -0.28
TPM1-230ENST00000561266 C10orf90Q96M02 699 aa13.29□□□□□ -0.28
TPM1-230ENST00000561266 GPR78Q96P69 363 aa13.29□□□□□ -0.28
TPM1-230ENST00000561266 PAFAH2Q99487 392 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms