RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 CMPK1P30085 196 aa9.98□□□□□ -0.81
CDC42BPB-207ENST00000560492 SOX11P35716 441 aa9.98□□□□□ -0.81
CDC42BPB-207ENST00000560492 C3AR1Q16581 482 aa9.98□□□□□ -0.81
CDC42BPB-207ENST00000560492 PARP6Q2NL67 630 aa9.98□□□□□ -0.81
CDC42BPB-207ENST00000560492 P3H1Q32P28 736 aa9.98□□□□□ -0.81
CDC42BPB-207ENST00000560492 ZNF766Q5HY98 468 aa9.98□□□□□ -0.81
CDC42BPB-207ENST00000560492 ATG9BQ674R7 924 aa9.98□□□□□ -0.81
CDC42BPB-207ENST00000560492 C11orf63Q6NUN7 778 aa9.98□□□□□ -0.81
CDC42BPB-207ENST00000560492 RIPOR1Q6ZS17 1223 aa9.98□□□□□ -0.81
CDC42BPB-207ENST00000560492 OR4N4Q8N0Y3 316 aa9.98□□□□□ -0.81
CDC42BPB-207ENST00000560492 FAM71DQ8N9W8 422 aa9.98□□□□□ -0.81
CDC42BPB-207ENST00000560492 OR52K1Q8NGK4 314 aa9.98□□□□□ -0.81
CDC42BPB-207ENST00000560492 LKAAEAR1Q8TD35 194 aa9.98□□□□□ -0.81
CDC42BPB-207ENST00000560492 METTL21AQ8WXB1 218 aa9.98□□□□□ -0.81
CDC42BPB-207ENST00000560492 ZUFSPQ96AP4 578 aa9.98□□□□□ -0.81
CDC42BPB-207ENST00000560492 RAD51AP1Q96B01 352 aa9.98□□□□□ -0.81
CDC42BPB-207ENST00000560492 FOPNLQ96NB1 174 aa9.98□□□□□ -0.81
CDC42BPB-207ENST00000560492 ZFYVE21Q9BQ24 234 aa9.98□□□□□ -0.81
CDC42BPB-207ENST00000560492 GPAMQ9HCL2 828 aa9.98□□□□□ -0.81
CDC42BPB-207ENST00000560492 KLHL1Q9NR64 748 aa9.98□□□□□ -0.81
CDC42BPB-207ENST00000560492 ABCF3Q9NUQ8 709 aa9.98□□□□□ -0.81
CDC42BPB-207ENST00000560492 C14orf105Q9NVL8 296 aa9.98□□□□□ -0.81
CDC42BPB-207ENST00000560492 STMN3Q9NZ72 180 aa9.98□□□□□ -0.81
CDC42BPB-207ENST00000560492 TFR2Q9UP52 801 aa9.98□□□□□ -0.81
CDC42BPB-207ENST00000560492 RUVBL2Q9Y230 463 aaKnown RBP9.98□□□□□ -0.81
CDC42BPB-207ENST00000560492 CCDC168Q8NDH2 2452 aa9.97□□□□□ -0.81
CDC42BPB-207ENST00000560492 NCOA6Q14686 2063 aaPredicted RBP9.97□□□□□ -0.81
CDC42BPB-207ENST00000560492 FITM1A5D6W6 292 aa9.97□□□□□ -0.81
CDC42BPB-207ENST00000560492 KRT87PA6NCN2 255 aa9.97□□□□□ -0.81
CDC42BPB-207ENST00000560492 RCCD1A6NED2 376 aa9.97□□□□□ -0.81
CDC42BPB-207ENST00000560492 E7EVH7 732 aa9.97□□□□□ -0.81
CDC42BPB-207ENST00000560492 TTI1O43156 1089 aa9.97□□□□□ -0.81
CDC42BPB-207ENST00000560492 PSMD3O43242 534 aa9.97□□□□□ -0.81
CDC42BPB-207ENST00000560492 NRP2O60462 931 aa9.97□□□□□ -0.81
CDC42BPB-207ENST00000560492 ZNF189O75820 626 aaPredicted RBP9.97□□□□□ -0.81
CDC42BPB-207ENST00000560492 FKBP9O95302 570 aa9.97□□□□□ -0.81
CDC42BPB-207ENST00000560492 CLDN14O95500 239 aa9.97□□□□□ -0.81
CDC42BPB-207ENST00000560492 METTL18O95568 372 aa9.97□□□□□ -0.81
CDC42BPB-207ENST00000560492 ICAM2P13598 275 aa9.97□□□□□ -0.81
CDC42BPB-207ENST00000560492 ABOP16442 354 aa9.97□□□□□ -0.81
CDC42BPB-207ENST00000560492 ADORA2A-AS1P86434 159 aa9.97□□□□□ -0.81
CDC42BPB-207ENST00000560492 ALDH6A1Q02252 535 aaKnown RBP9.97□□□□□ -0.81
CDC42BPB-207ENST00000560492 TLE4Q04727 773 aa9.97□□□□□ -0.81
CDC42BPB-207ENST00000560492 TCEAL1Q15170 157 aa9.97□□□□□ -0.81
CDC42BPB-207ENST00000560492 SPA17Q15506 151 aa9.97□□□□□ -0.81
CDC42BPB-207ENST00000560492 FCRLBQ6BAA4 426 aa9.97□□□□□ -0.81
CDC42BPB-207ENST00000560492 AADACL2Q6P093 401 aa9.97□□□□□ -0.81
CDC42BPB-207ENST00000560492 ADCK2Q7Z695 626 aa9.97□□□□□ -0.81
CDC42BPB-207ENST00000560492 LINC00523Q86TU6 105 aa9.97□□□□□ -0.81
CDC42BPB-207ENST00000560492 CNGA4Q8IV77 575 aa9.97□□□□□ -0.81
CDC42BPB-207ENST00000560492 OR2L3Q8NG85 312 aa9.97□□□□□ -0.81
CDC42BPB-207ENST00000560492 OR4L1Q8NH43 312 aa9.97□□□□□ -0.81
CDC42BPB-207ENST00000560492 PSMF1Q92530 271 aa9.97□□□□□ -0.81
CDC42BPB-207ENST00000560492 RERGQ96A58 199 aaPredicted RBP9.97□□□□□ -0.81
CDC42BPB-207ENST00000560492 DPH7Q9BTV6 452 aa9.97□□□□□ -0.81
CDC42BPB-207ENST00000560492 SLC2A6Q9UGQ3 507 aa9.97□□□□□ -0.81
CDC42BPB-207ENST00000560492 MKL2Q9ULH7 1088 aa9.97□□□□□ -0.81
CDC42BPB-207ENST00000560492 MRFAP1Q9Y605 127 aa9.97□□□□□ -0.81
CDC42BPB-207ENST00000560492 NFS1Q9Y697 457 aa9.97□□□□□ -0.81
CDC42BPB-207ENST00000560492 HEATR5BQ9P2D3 2071 aa9.97□□□□□ -0.81
CDC42BPB-207ENST00000560492 GTF3C1Q12789 2109 aa9.97□□□□□ -0.81
CDC42BPB-207ENST00000560492 SCN3AQ9NY46 2000 aa9.96□□□□□ -0.81
CDC42BPB-207ENST00000560492 AKR1B15C9JRZ8 316 aaPredicted RBP9.96□□□□□ -0.82
CDC42BPB-207ENST00000560492 NPIPA5E9PKD4 350 aa9.96□□□□□ -0.82
CDC42BPB-207ENST00000560492 H0YGG7 62 aa9.96□□□□□ -0.82
CDC42BPB-207ENST00000560492 C19orf84I3L1E1 186 aa9.96□□□□□ -0.82
CDC42BPB-207ENST00000560492 PRICKLE3O43900 615 aaPredicted RBP9.96□□□□□ -0.82
CDC42BPB-207ENST00000560492 SEC24DO94855 1032 aaPredicted RBP9.96□□□□□ -0.82
CDC42BPB-207ENST00000560492 NADKO95544 446 aaPredicted RBP9.96□□□□□ -0.82
CDC42BPB-207ENST00000560492 CTNNA1P35221 906 aaKnown RBP9.96□□□□□ -0.82
CDC42BPB-207ENST00000560492 RPA3P35244 121 aaPredicted RBP9.96□□□□□ -0.82
CDC42BPB-207ENST00000560492 ST13P50502 369 aaKnown RBP9.96□□□□□ -0.82
CDC42BPB-207ENST00000560492 HADHBP55084 474 aaKnown RBP9.96□□□□□ -0.82
CDC42BPB-207ENST00000560492 RWDD2BP57060 319 aa9.96□□□□□ -0.82
CDC42BPB-207ENST00000560492 ARF3P61204 181 aaPredicted RBP9.96□□□□□ -0.82
CDC42BPB-207ENST00000560492 CDH17Q12864 832 aa9.96□□□□□ -0.82
CDC42BPB-207ENST00000560492 GRB7Q14451 532 aa9.96□□□□□ -0.82
CDC42BPB-207ENST00000560492 NAA25Q14CX7 972 aa9.96□□□□□ -0.82
CDC42BPB-207ENST00000560492 SYT16Q17RD7 645 aa9.96□□□□□ -0.82
CDC42BPB-207ENST00000560492 BTBD16Q32M84 506 aa9.96□□□□□ -0.82
CDC42BPB-207ENST00000560492 MINDY4Q4G0A6 757 aa9.96□□□□□ -0.82
CDC42BPB-207ENST00000560492 AARS2Q5JTZ9 985 aaKnown RBP9.96□□□□□ -0.82
CDC42BPB-207ENST00000560492 KCTD11Q693B1 232 aa9.96□□□□□ -0.82
CDC42BPB-207ENST00000560492 BLOC1S3Q6QNY0 202 aa9.96□□□□□ -0.82
CDC42BPB-207ENST00000560492 MEX3BQ6ZN04 569 aaKnown RBP9.96□□□□□ -0.82
CDC42BPB-207ENST00000560492 RNF44Q7L0R7 432 aa9.96□□□□□ -0.82
CDC42BPB-207ENST00000560492 OTOAQ7RTW8 1153 aa9.96□□□□□ -0.82
CDC42BPB-207ENST00000560492 LDB1Q86U70 411 aaPredicted RBP9.96□□□□□ -0.82
CDC42BPB-207ENST00000560492 ZNF295-AS1Q8N0V1 137 aa9.96□□□□□ -0.82
CDC42BPB-207ENST00000560492 CSNK1A1LQ8N752 337 aa9.96□□□□□ -0.82
CDC42BPB-207ENST00000560492 MAGEC3Q8TD91 643 aa9.96□□□□□ -0.82
CDC42BPB-207ENST00000560492 MRFAP1L1Q96HT8 127 aa9.96□□□□□ -0.82
CDC42BPB-207ENST00000560492 C10orf90Q96M02 699 aa9.96□□□□□ -0.82
CDC42BPB-207ENST00000560492 ZNF285Q96NJ3 590 aa9.96□□□□□ -0.82
CDC42BPB-207ENST00000560492 PANX3Q96QZ0 392 aa9.96□□□□□ -0.82
CDC42BPB-207ENST00000560492 MENTQ9BUN1 341 aa9.96□□□□□ -0.82
CDC42BPB-207ENST00000560492 CARD6Q9BX69 1037 aa9.96□□□□□ -0.82
CDC42BPB-207ENST00000560492 KCNK13Q9HB14 408 aa9.96□□□□□ -0.82
CDC42BPB-207ENST00000560492 MRPS30Q9NP92 439 aaKnown RBP9.96□□□□□ -0.82
CDC42BPB-207ENST00000560492 MKKSQ9NPJ1 570 aaPredicted RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms