RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 C1GALT1C1LP0DN25 315 aa17.41■□□□□ 0.38
CLPX-203ENST00000558958 UROSP10746 265 aa17.41■□□□□ 0.38
CLPX-203ENST00000558958 CKMT1AP12532 417 aa17.41■□□□□ 0.38
CLPX-203ENST00000558958 HGFP14210 728 aa17.41■□□□□ 0.38
CLPX-203ENST00000558958 CD22P20273 847 aa17.41■□□□□ 0.38
CLPX-203ENST00000558958 VARSP26640 1264 aaKnown RBP17.41■□□□□ 0.38
CLPX-203ENST00000558958 CMPK1P30085 196 aa17.41■□□□□ 0.38
CLPX-203ENST00000558958 OR1D5P58170 312 aa17.41■□□□□ 0.38
CLPX-203ENST00000558958 UGT3A2Q3SY77 523 aa17.41■□□□□ 0.38
CLPX-203ENST00000558958 FAM219BQ5XKK7 198 aa17.41■□□□□ 0.38
CLPX-203ENST00000558958 KANK2Q63ZY3 851 aa17.41■□□□□ 0.38
CLPX-203ENST00000558958 CLEC6AQ6EIG7 209 aa17.41■□□□□ 0.38
CLPX-203ENST00000558958 ARMC6Q6NXE6 501 aa17.41■□□□□ 0.38
CLPX-203ENST00000558958 GUSBP11Q6P575 273 aa17.41■□□□□ 0.38
CLPX-203ENST00000558958 PRR23CQ6ZRP0 262 aa17.41■□□□□ 0.38
CLPX-203ENST00000558958 CPLX4Q7Z7G2 160 aa17.41■□□□□ 0.38
CLPX-203ENST00000558958 FAM20CQ8IXL6 584 aa17.41■□□□□ 0.38
CLPX-203ENST00000558958 CCDC74AQ96AQ1 378 aa17.41■□□□□ 0.38
CLPX-203ENST00000558958 PTCD3Q96EY7 689 aaKnown RBP17.41■□□□□ 0.38
CLPX-203ENST00000558958 FAM107BQ9H098 131 aa17.41■□□□□ 0.38
CLPX-203ENST00000558958 NSRP1Q9H0G5 558 aaKnown RBP17.41■□□□□ 0.38
CLPX-203ENST00000558958 EPB41L1Q9H4G0 881 aa17.41■□□□□ 0.38
CLPX-203ENST00000558958 PELI2Q9HAT8 420 aa17.41■□□□□ 0.38
CLPX-203ENST00000558958 MRPS30Q9NP92 439 aaKnown RBP17.41■□□□□ 0.38
CLPX-203ENST00000558958 CUEDC1Q9NWM3 386 aaPredicted RBP17.41■□□□□ 0.38
CLPX-203ENST00000558958 CPED1A4D0V7 1026 aa17.4■□□□□ 0.38
CLPX-203ENST00000558958 B4GAT1O43505 415 aa17.4■□□□□ 0.38
CLPX-203ENST00000558958 CRCPO75575 148 aa17.4■□□□□ 0.38
CLPX-203ENST00000558958 FKBP9O95302 570 aa17.4■□□□□ 0.38
CLPX-203ENST00000558958 CAPN1P07384 714 aa17.4■□□□□ 0.38
CLPX-203ENST00000558958 CD59P13987 128 aa17.4■□□□□ 0.38
CLPX-203ENST00000558958 JUPP14923 745 aa17.4■□□□□ 0.38
CLPX-203ENST00000558958 HNF4AP41235 474 aa17.4■□□□□ 0.38
CLPX-203ENST00000558958 HK2P52789 917 aa17.4■□□□□ 0.38
CLPX-203ENST00000558958 SLC5A12Q1EHB4 618 aa17.4■□□□□ 0.38
CLPX-203ENST00000558958 KIAA1614Q5VZ46 1190 aa17.4■□□□□ 0.38
CLPX-203ENST00000558958 GRHL2Q6ISB3 625 aa17.4■□□□□ 0.38
CLPX-203ENST00000558958 SPESP1Q6UW49 350 aa17.4■□□□□ 0.38
CLPX-203ENST00000558958 FAM129CQ86XR2 697 aa17.4■□□□□ 0.38
CLPX-203ENST00000558958 MYLK4Q86YV6 388 aaPredicted RBP17.4■□□□□ 0.38
CLPX-203ENST00000558958 OR4K1Q8NGD4 311 aa17.4■□□□□ 0.38
CLPX-203ENST00000558958 METTL6Q8TCB7 284 aa17.4■□□□□ 0.38
CLPX-203ENST00000558958 NAT6Q93015 286 aa17.4■□□□□ 0.38
CLPX-203ENST00000558958 FAR2Q96K12 515 aa17.4■□□□□ 0.38
CLPX-203ENST00000558958 EFCAB11Q9BUY7 163 aa17.4■□□□□ 0.38
CLPX-203ENST00000558958 SLC29A3Q9BZD2 475 aa17.4■□□□□ 0.38
CLPX-203ENST00000558958 SLC6A20Q9NP91 592 aa17.4■□□□□ 0.38
CLPX-203ENST00000558958 GEMIN8Q9NWZ8 242 aaKnown RBP17.4■□□□□ 0.38
CLPX-203ENST00000558958 PSD3Q9NYI0 1048 aa17.4■□□□□ 0.38
CLPX-203ENST00000558958 POMT2Q9UKY4 750 aa17.4■□□□□ 0.38
CLPX-203ENST00000558958 FIS1Q9Y3D6 152 aa17.4■□□□□ 0.38
CLPX-203ENST00000558958 TIMM22Q9Y584 194 aa17.4■□□□□ 0.38
CLPX-203ENST00000558958 SLCO1B7G3V0H7 640 aa17.39■□□□□ 0.37
CLPX-203ENST00000558958 H7BY64 318 aa17.39■□□□□ 0.37
CLPX-203ENST00000558958 TROVE2P10155 538 aaKnown RBP eCLIP17.39■□□□□ 0.37
CLPX-203ENST00000558958 HRH2P25021 359 aa17.39■□□□□ 0.37
CLPX-203ENST00000558958 SERPINB3P29508 390 aa17.39■□□□□ 0.37
CLPX-203ENST00000558958 DUSP3P51452 185 aaPredicted RBP17.39■□□□□ 0.37
CLPX-203ENST00000558958 CCR8P51685 355 aa17.39■□□□□ 0.37
CLPX-203ENST00000558958 PPP1CAP62136 330 aa17.39■□□□□ 0.37
CLPX-203ENST00000558958 GPLD1P80108 840 aa17.39■□□□□ 0.37
CLPX-203ENST00000558958 CPSF6Q16630 551 aaKnown RBP eCLIP17.39■□□□□ 0.37
CLPX-203ENST00000558958 SPRED1Q7Z699 444 aa17.39■□□□□ 0.37
CLPX-203ENST00000558958 WDR75Q8IWA0 830 aaKnown RBP17.39■□□□□ 0.37
CLPX-203ENST00000558958 CHCHD4Q8N4Q1 142 aa17.39■□□□□ 0.37
CLPX-203ENST00000558958 AFAP1L2Q8N4X5 818 aa17.39■□□□□ 0.37
CLPX-203ENST00000558958 Q8N9G6 341 aaPredicted RBP17.39■□□□□ 0.37
CLPX-203ENST00000558958 PRR11Q96HE9 360 aaPredicted RBP17.39■□□□□ 0.37
CLPX-203ENST00000558958 PRAP1Q96NZ9 151 aa17.39■□□□□ 0.37
CLPX-203ENST00000558958 CCT8L2Q96SF2 557 aa17.39■□□□□ 0.37
CLPX-203ENST00000558958 DPH7Q9BTV6 452 aa17.39■□□□□ 0.37
CLPX-203ENST00000558958 TRIM55Q9BYV6 548 aa17.39■□□□□ 0.37
CLPX-203ENST00000558958 RAB33BQ9H082 229 aa17.39■□□□□ 0.37
CLPX-203ENST00000558958 ABCG4Q9H172 646 aa17.39■□□□□ 0.37
CLPX-203ENST00000558958 RABEP2Q9H5N1 569 aa17.39■□□□□ 0.37
CLPX-203ENST00000558958 NPHS2Q9NP85 383 aa17.39■□□□□ 0.37
CLPX-203ENST00000558958 VTI1BQ9UEU0 232 aa17.39■□□□□ 0.37
CLPX-203ENST00000558958 EPHA6Q9UF33 1036 aa17.39■□□□□ 0.37
CLPX-203ENST00000558958 HCN4Q9Y3Q4 1203 aa17.39■□□□□ 0.37
CLPX-203ENST00000558958 DNAJC15Q9Y5T4 150 aa17.39■□□□□ 0.37
CLPX-203ENST00000558958 USH1CQ9Y6N9 552 aa17.39■□□□□ 0.37
CLPX-203ENST00000558958 ZNF195O14628 629 aa17.38■□□□□ 0.37
CLPX-203ENST00000558958 HGSO14964 777 aaPredicted RBP17.38■□□□□ 0.37
CLPX-203ENST00000558958 HDAC3O15379 428 aa17.38■□□□□ 0.37
CLPX-203ENST00000558958 ZW10O43264 779 aa17.38■□□□□ 0.37
CLPX-203ENST00000558958 TNFSF14O43557 240 aa17.38■□□□□ 0.37
CLPX-203ENST00000558958 FOXD2O60548 495 aaPredicted RBP17.38■□□□□ 0.37
CLPX-203ENST00000558958 FAM107AO95990 144 aa17.38■□□□□ 0.37
CLPX-203ENST00000558958 ALOX15P16050 662 aaPredicted RBP17.38■□□□□ 0.37
CLPX-203ENST00000558958 GRIA3P42263 894 aa17.38■□□□□ 0.37
CLPX-203ENST00000558958 DAB2P98082 770 aa17.38■□□□□ 0.37
CLPX-203ENST00000558958 LAPTM5Q13571 262 aa17.38■□□□□ 0.37
CLPX-203ENST00000558958 SLBPQ14493 270 aaKnown RBP eCLIP17.38■□□□□ 0.37
CLPX-203ENST00000558958 AASDHQ4L235 1098 aaPredicted RBP17.38■□□□□ 0.37
CLPX-203ENST00000558958 PAGE2BQ5JRK9 111 aa17.38■□□□□ 0.37
CLPX-203ENST00000558958 PERM1Q5SV97 790 aa17.38■□□□□ 0.37
CLPX-203ENST00000558958 NKAIN2Q5VXU1 208 aa17.38■□□□□ 0.37
CLPX-203ENST00000558958 EFL1Q7Z2Z2 1120 aaKnown RBP17.38■□□□□ 0.37
CLPX-203ENST00000558958 MAVSQ7Z434 540 aa17.38■□□□□ 0.37
CLPX-203ENST00000558958 TRIM73Q86UV7 250 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms