RNA–Protein interactions for RNA: ENST00000557588.5

ABCD4-228, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3 BASIC

Gene ABCD4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-228ENST00000557588 OR2A1Q8NGT9 310 aa17.4■□□□□ 0.38
ABCD4-228ENST00000557588 PHF10Q8WUB8 498 aaKnown RBP17.4■□□□□ 0.38
ABCD4-228ENST00000557588 RAD51AP1Q96B01 352 aa17.4■□□□□ 0.38
ABCD4-228ENST00000557588 FAM118BQ9BPY3 351 aa17.4■□□□□ 0.38
ABCD4-228ENST00000557588 CARD6Q9BX69 1037 aa17.4■□□□□ 0.38
ABCD4-228ENST00000557588 PIH1D1Q9NWS0 290 aaKnown RBP17.4■□□□□ 0.38
ABCD4-228ENST00000557588 STMN3Q9NZ72 180 aa17.4■□□□□ 0.38
ABCD4-228ENST00000557588 ABCA2Q9BZC7 2435 aa17.4■□□□□ 0.38
ABCD4-228ENST00000557588 A0A1W2PPV9 198 aa17.39■□□□□ 0.37
ABCD4-228ENST00000557588 ASPDHA6ND91 283 aa17.39■□□□□ 0.37
ABCD4-228ENST00000557588 DIAPH2O60879 1101 aa17.39■□□□□ 0.37
ABCD4-228ENST00000557588 TPM3P06753 285 aa17.39■□□□□ 0.37
ABCD4-228ENST00000557588 EFNA3P52797 238 aa17.39■□□□□ 0.37
ABCD4-228ENST00000557588 CSNK1G2P78368 415 aa17.39■□□□□ 0.37
ABCD4-228ENST00000557588 PARP6Q2NL67 630 aa17.39■□□□□ 0.37
ABCD4-228ENST00000557588 CAVIN1Q6NZI2 390 aaKnown RBP17.39■□□□□ 0.37
ABCD4-228ENST00000557588 AFTPHQ6ULP2 937 aa17.39■□□□□ 0.37
ABCD4-228ENST00000557588 ZC3H7AQ8IWR0 971 aaKnown RBP17.39■□□□□ 0.37
ABCD4-228ENST00000557588 RAB42Q8N4Z0 105 aa17.39■□□□□ 0.37
ABCD4-228ENST00000557588 MDS2Q8NDY4 140 aa17.39■□□□□ 0.37
ABCD4-228ENST00000557588 TTC1Q99614 292 aa17.39■□□□□ 0.37
ABCD4-228ENST00000557588 RUVBL1Q9Y265 456 aaKnown RBP17.39■□□□□ 0.37
ABCD4-228ENST00000557588 SPG11Q96JI7 2443 aa17.39■□□□□ 0.37
ABCD4-228ENST00000557588 NIPBLQ6KC79 2804 aaeCLIP17.39■□□□□ 0.37
ABCD4-228ENST00000557588 ANKHD1Q8IWZ3 2542 aaKnown RBP17.38■□□□□ 0.37
ABCD4-228ENST00000557588 GOLGA6L19H0YKK7 550 aa17.38■□□□□ 0.37
ABCD4-228ENST00000557588 PHF2O75151 1096 aa17.38■□□□□ 0.37
ABCD4-228ENST00000557588 METTL18O95568 372 aa17.38■□□□□ 0.37
ABCD4-228ENST00000557588 AOAHP28039 575 aa17.38■□□□□ 0.37
ABCD4-228ENST00000557588 TMED2Q15363 201 aa17.38■□□□□ 0.37
ABCD4-228ENST00000557588 TTC23LQ6PF05 361 aa17.38■□□□□ 0.37
ABCD4-228ENST00000557588 MEX3BQ6ZN04 569 aaKnown RBP17.38■□□□□ 0.37
ABCD4-228ENST00000557588 NCCRP1Q6ZVX7 275 aaPredicted RBP17.38■□□□□ 0.37
ABCD4-228ENST00000557588 ARHGEF39Q8N4T4 335 aa17.38■□□□□ 0.37
ABCD4-228ENST00000557588 AMER2Q8N7J2 671 aa17.38■□□□□ 0.37
ABCD4-228ENST00000557588 SCMH1Q96GD3 660 aa17.38■□□□□ 0.37
ABCD4-228ENST00000557588 FRMD6Q96NE9 622 aa17.38■□□□□ 0.37
ABCD4-228ENST00000557588 OSBPL8Q9BZF1 889 aa17.38■□□□□ 0.37
ABCD4-228ENST00000557588 NEU2Q9Y3R4 380 aa17.38■□□□□ 0.37
ABCD4-228ENST00000557588 MRFAP1Q9Y605 127 aa17.38■□□□□ 0.37
ABCD4-228ENST00000557588 IQCF5A8MTL0 148 aa17.37■□□□□ 0.37
ABCD4-228ENST00000557588 FAM227AF5H4B4 570 aa17.37■□□□□ 0.37
ABCD4-228ENST00000557588 H0YGG7 62 aa17.37■□□□□ 0.37
ABCD4-228ENST00000557588 TTI1O43156 1089 aa17.37■□□□□ 0.37
ABCD4-228ENST00000557588 MFAP3LO75121 409 aa17.37■□□□□ 0.37
ABCD4-228ENST00000557588 C1orf105O95561 183 aa17.37■□□□□ 0.37
ABCD4-228ENST00000557588 GOT2P00505 430 aaKnown RBP17.37■□□□□ 0.37
ABCD4-228ENST00000557588 C8orf89P0DMQ9 161 aa17.37■□□□□ 0.37
ABCD4-228ENST00000557588 CTNNA1P35221 906 aaKnown RBP17.37■□□□□ 0.37
ABCD4-228ENST00000557588 BDKRB1P46663 353 aa17.37■□□□□ 0.37
ABCD4-228ENST00000557588 ARF3P61204 181 aaPredicted RBP17.37■□□□□ 0.37
ABCD4-228ENST00000557588 ALDH6A1Q02252 535 aaKnown RBP17.37■□□□□ 0.37
ABCD4-228ENST00000557588 P3H1Q32P28 736 aa17.37■□□□□ 0.37
ABCD4-228ENST00000557588 CCSMST1Q4G0I0 132 aa17.37■□□□□ 0.37
ABCD4-228ENST00000557588 CCDC38Q502W7 563 aa17.37■□□□□ 0.37
ABCD4-228ENST00000557588 GARNL3Q5VVW2 1013 aa17.37■□□□□ 0.37
ABCD4-228ENST00000557588 PLAG1Q6DJT9 500 aa17.37■□□□□ 0.37
ABCD4-228ENST00000557588 H3F3CQ6NXT2 135 aa17.37■□□□□ 0.37
ABCD4-228ENST00000557588 ZNF534Q76KX8 674 aa17.37■□□□□ 0.37
ABCD4-228ENST00000557588 SIAH3Q8IW03 269 aa17.37■□□□□ 0.37
ABCD4-228ENST00000557588 BEST3Q8N1M1 668 aa17.37■□□□□ 0.37
ABCD4-228ENST00000557588 CSNK1A1LQ8N752 337 aa17.37■□□□□ 0.37
ABCD4-228ENST00000557588 HDAC10Q969S8 669 aa17.37■□□□□ 0.37
ABCD4-228ENST00000557588 DMRTA2Q96SC8 542 aa17.37■□□□□ 0.37
ABCD4-228ENST00000557588 DPH7Q9BTV6 452 aa17.37■□□□□ 0.37
ABCD4-228ENST00000557588 YIPF2Q9BWQ6 316 aa17.37■□□□□ 0.37
ABCD4-228ENST00000557588 TSPAN10Q9H1Z9 355 aaPredicted RBP17.37■□□□□ 0.37
ABCD4-228ENST00000557588 SYNPO2LQ9H987 977 aa17.37■□□□□ 0.37
ABCD4-228ENST00000557588 SCN2AQ99250 2005 aa17.37■□□□□ 0.37
ABCD4-228ENST00000557588 KRT87PA6NCN2 255 aa17.36■□□□□ 0.37
ABCD4-228ENST00000557588 E9PLN8 166 aa17.36■□□□□ 0.37
ABCD4-228ENST00000557588 VPS26AO75436 327 aa17.36■□□□□ 0.37
ABCD4-228ENST00000557588 CYC1P08574 325 aa17.36■□□□□ 0.37
ABCD4-228ENST00000557588 ANXA5P08758 320 aa17.36■□□□□ 0.37
ABCD4-228ENST00000557588 IGFBP2P18065 325 aa17.36■□□□□ 0.37
ABCD4-228ENST00000557588 YBX1P67809 324 aaKnown RBP17.36■□□□□ 0.37
ABCD4-228ENST00000557588 ACVR1Q04771 509 aa17.36■□□□□ 0.37
ABCD4-228ENST00000557588 TUBA3CQ13748 450 aa17.36■□□□□ 0.37
ABCD4-228ENST00000557588 SEMA3AQ14563 771 aa17.36■□□□□ 0.37
ABCD4-228ENST00000557588 HKDC1Q2TB90 917 aa17.36■□□□□ 0.37
ABCD4-228ENST00000557588 ACER2Q5QJU3 275 aa17.36■□□□□ 0.37
ABCD4-228ENST00000557588 FBXO42Q6P3S6 717 aa17.36■□□□□ 0.37
ABCD4-228ENST00000557588 TUBA3EQ6PEY2 450 aa17.36■□□□□ 0.37
ABCD4-228ENST00000557588 AGAP11Q8TF27 550 aa17.36■□□□□ 0.37
ABCD4-228ENST00000557588 MMABQ96EY8 250 aaPredicted RBP17.36■□□□□ 0.37
ABCD4-228ENST00000557588 ZNF354BQ96LW1 612 aa17.36■□□□□ 0.37
ABCD4-228ENST00000557588 SIGLEC12Q96PQ1 595 aa17.36■□□□□ 0.37
ABCD4-228ENST00000557588 VKORC1Q9BQB6 163 aa17.36■□□□□ 0.37
ABCD4-228ENST00000557588 TRIM51Q9BSJ1 452 aa17.36■□□□□ 0.37
ABCD4-228ENST00000557588 DRC3Q9H069 523 aa17.36■□□□□ 0.37
ABCD4-228ENST00000557588 SPATA7Q9P0W8 599 aa17.36■□□□□ 0.37
ABCD4-228ENST00000557588 MKL2Q9ULH7 1088 aa17.36■□□□□ 0.37
ABCD4-228ENST00000557588 RIMKLBQ9ULI2 386 aa17.36■□□□□ 0.37
ABCD4-228ENST00000557588 NFS1Q9Y697 457 aa17.36■□□□□ 0.37
ABCD4-228ENST00000557588 NPIPA5E9PKD4 350 aa17.35■□□□□ 0.37
ABCD4-228ENST00000557588 ADAM10O14672 748 aa17.35■□□□□ 0.37
ABCD4-228ENST00000557588 FOXS1O43638 330 aa17.35■□□□□ 0.37
ABCD4-228ENST00000557588 SEC24DO94855 1032 aaPredicted RBP17.35■□□□□ 0.37
ABCD4-228ENST00000557588 ABOP16442 354 aa17.35■□□□□ 0.37
ABCD4-228ENST00000557588 HOXB4P17483 251 aaPredicted RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms