RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 MBOAT1Q6ZNC8 495 aa10.24□□□□□ -0.77
LINC00239-201ENST00000556973 TRMT10CQ7L0Y3 403 aaKnown RBP10.24□□□□□ -0.77
LINC00239-201ENST00000556973 CCDC91Q7Z6B0 441 aa10.24□□□□□ -0.77
LINC00239-201ENST00000556973 PAQR7Q86WK9 346 aa10.24□□□□□ -0.77
LINC00239-201ENST00000556973 ZNF655Q8N720 491 aaPredicted RBP10.24□□□□□ -0.77
LINC00239-201ENST00000556973 LRRN4CLQ8ND94 238 aa10.24□□□□□ -0.77
LINC00239-201ENST00000556973 OR56A3Q8NH54 315 aa10.24□□□□□ -0.77
LINC00239-201ENST00000556973 PROKR1Q8TCW9 393 aa10.24□□□□□ -0.77
LINC00239-201ENST00000556973 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.24□□□□□ -0.77
LINC00239-201ENST00000556973 MRRFQ96E11 262 aaKnown RBP10.24□□□□□ -0.77
LINC00239-201ENST00000556973 HAUS8Q9BT25 410 aa10.24□□□□□ -0.77
LINC00239-201ENST00000556973 SGPP1Q9BX95 441 aa10.24□□□□□ -0.77
LINC00239-201ENST00000556973 AKIRIN1Q9H9L7 192 aaPredicted RBP10.24□□□□□ -0.77
LINC00239-201ENST00000556973 NMRAL1Q9HBL8 299 aa10.24□□□□□ -0.77
LINC00239-201ENST00000556973 IL17BQ9UHF5 180 aa10.24□□□□□ -0.77
LINC00239-201ENST00000556973 IKZF3Q9UKT9 509 aa10.24□□□□□ -0.77
LINC00239-201ENST00000556973 FARSAQ9Y285 508 aaKnown RBP10.24□□□□□ -0.77
LINC00239-201ENST00000556973 ACOT9Q9Y305 439 aa10.24□□□□□ -0.77
LINC00239-201ENST00000556973 IKBKGQ9Y6K9 419 aa10.24□□□□□ -0.77
LINC00239-201ENST00000556973 APC2O95996 2303 aa10.24□□□□□ -0.77
LINC00239-201ENST00000556973 HMX2A2RU54 273 aa10.23□□□□□ -0.77
LINC00239-201ENST00000556973 NPEPPSL1A6NEC2 478 aa10.23□□□□□ -0.77
LINC00239-201ENST00000556973 ESPNB1AK53 854 aa10.23□□□□□ -0.77
LINC00239-201ENST00000556973 H7BY64 318 aa10.23□□□□□ -0.77
LINC00239-201ENST00000556973 TXNDC9O14530 226 aa10.23□□□□□ -0.77
LINC00239-201ENST00000556973 CTSBP07858 339 aa10.23□□□□□ -0.77
LINC00239-201ENST00000556973 INHBAP08476 426 aa10.23□□□□□ -0.77
LINC00239-201ENST00000556973 CD63P08962 238 aa10.23□□□□□ -0.77
LINC00239-201ENST00000556973 SLC35E2BP0CK96 405 aa10.23□□□□□ -0.77
LINC00239-201ENST00000556973 EZRP15311 586 aaKnown RBP10.23□□□□□ -0.77
LINC00239-201ENST00000556973 ALAS2P22557 587 aa10.23□□□□□ -0.77
LINC00239-201ENST00000556973 CNTFP26441 200 aa10.23□□□□□ -0.77
LINC00239-201ENST00000556973 PTPN4P29074 926 aa10.23□□□□□ -0.77
LINC00239-201ENST00000556973 GCGRP47871 477 aa10.23□□□□□ -0.77
LINC00239-201ENST00000556973 SERPINB9P50453 376 aa10.23□□□□□ -0.77
LINC00239-201ENST00000556973 EMP3P54852 163 aa10.23□□□□□ -0.77
LINC00239-201ENST00000556973 VSX2P58304 361 aaPredicted RBP10.23□□□□□ -0.77
LINC00239-201ENST00000556973 CSHL1Q14406 222 aa10.23□□□□□ -0.77
LINC00239-201ENST00000556973 UAP1Q16222 522 aaPredicted RBP10.23□□□□□ -0.77
LINC00239-201ENST00000556973 ZXDCQ2QGD7 858 aaPredicted RBP10.23□□□□□ -0.77
LINC00239-201ENST00000556973 CDKL4Q5MAI5 379 aa10.23□□□□□ -0.77
LINC00239-201ENST00000556973 TEX35Q5T0J7 233 aa10.23□□□□□ -0.77
LINC00239-201ENST00000556973 UBAP2Q5T6F2 1119 aaKnown RBP10.23□□□□□ -0.77
LINC00239-201ENST00000556973 ZNF385CQ66K41 422 aaPredicted RBP10.23□□□□□ -0.77
LINC00239-201ENST00000556973 FRMPD2BQ6IN97 320 aa10.23□□□□□ -0.77
LINC00239-201ENST00000556973 FRA10AC1Q70Z53 315 aa10.23□□□□□ -0.77
LINC00239-201ENST00000556973 ADCK2Q7Z695 626 aa10.23□□□□□ -0.77
LINC00239-201ENST00000556973 CMC1Q7Z7K0 106 aa10.23□□□□□ -0.77
LINC00239-201ENST00000556973 TBC1D1Q86TI0 1168 aaPredicted RBP10.23□□□□□ -0.77
LINC00239-201ENST00000556973 C17orf64Q86WR6 236 aa10.23□□□□□ -0.77
LINC00239-201ENST00000556973 TCAIMQ8N3R3 496 aa10.23□□□□□ -0.77
LINC00239-201ENST00000556973 SPATA6LQ8N4H0 392 aa10.23□□□□□ -0.77
LINC00239-201ENST00000556973 TTC29Q8NA56 475 aaPredicted RBP10.23□□□□□ -0.77
LINC00239-201ENST00000556973 STAG3L4Q8TBR4 150 aa10.23□□□□□ -0.77
LINC00239-201ENST00000556973 CT55Q8WUE5 264 aa10.23□□□□□ -0.77
LINC00239-201ENST00000556973 SLC44A1Q8WWI5 657 aa10.23□□□□□ -0.77
LINC00239-201ENST00000556973 KIAA1191Q96A73 305 aa10.23□□□□□ -0.77
LINC00239-201ENST00000556973 ALKBH8Q96BT7 664 aaKnown RBP10.23□□□□□ -0.77
LINC00239-201ENST00000556973 PYCR2Q96C36 320 aa10.23□□□□□ -0.77
LINC00239-201ENST00000556973 PRAP1Q96NZ9 151 aa10.23□□□□□ -0.77
LINC00239-201ENST00000556973 CATSPER2Q96P56 530 aa10.23□□□□□ -0.77
LINC00239-201ENST00000556973 OR2A5Q96R48 311 aa10.23□□□□□ -0.77
LINC00239-201ENST00000556973 C17orf62Q9BQA9 187 aa10.23□□□□□ -0.77
LINC00239-201ENST00000556973 NLNQ9BYT8 704 aa10.23□□□□□ -0.77
LINC00239-201ENST00000556973 CHST8Q9H2A9 424 aa10.23□□□□□ -0.77
LINC00239-201ENST00000556973 TXLNGQ9NUQ3 528 aa10.23□□□□□ -0.77
LINC00239-201ENST00000556973 TLK1Q9UKI8 766 aa10.23□□□□□ -0.77
LINC00239-201ENST00000556973 HEATR5BQ9P2D3 2071 aa10.22□□□□□ -0.77
LINC00239-201ENST00000556973 KCNE1BA0A087WTH5 132 aa10.22□□□□□ -0.77
LINC00239-201ENST00000556973 A0A087X1B8 175 aa10.22□□□□□ -0.77
LINC00239-201ENST00000556973 LOC105369274A0A096LPK9 316 aa10.22□□□□□ -0.77
LINC00239-201ENST00000556973 LOC102723532A0A0G2JNH3 316 aa10.22□□□□□ -0.77
LINC00239-201ENST00000556973 HYKKA2RU49 373 aa10.22□□□□□ -0.77
LINC00239-201ENST00000556973 POC1B-GALNT4F8VUJ3 575 aa10.22□□□□□ -0.77
LINC00239-201ENST00000556973 H0YGG7 62 aa10.22□□□□□ -0.77
LINC00239-201ENST00000556973 ERVH48-1M5A8F1 160 aa10.22□□□□□ -0.77
LINC00239-201ENST00000556973 NKX2-8O15522 239 aa10.22□□□□□ -0.77
LINC00239-201ENST00000556973 CREG1O75629 220 aa10.22□□□□□ -0.77
LINC00239-201ENST00000556973 KRT38O76015 456 aa10.22□□□□□ -0.77
LINC00239-201ENST00000556973 ITGB2P05107 769 aa10.22□□□□□ -0.77
LINC00239-201ENST00000556973 EIF2S1P05198 315 aaKnown RBP10.22□□□□□ -0.77
LINC00239-201ENST00000556973 ABHD2P08910 425 aa10.22□□□□□ -0.77
LINC00239-201ENST00000556973 LTA4HP09960 611 aaKnown RBP10.22□□□□□ -0.77
LINC00239-201ENST00000556973 FAM153BP0C7A2 387 aa10.22□□□□□ -0.77
LINC00239-201ENST00000556973 PIM1P11309 404 aaPredicted RBP10.22□□□□□ -0.77
LINC00239-201ENST00000556973 GRK3P35626 688 aa10.22□□□□□ -0.77
LINC00239-201ENST00000556973 MSH2P43246 934 aa10.22□□□□□ -0.77
LINC00239-201ENST00000556973 CSRP3P50461 194 aa10.22□□□□□ -0.77
LINC00239-201ENST00000556973 ARF3P61204 181 aaPredicted RBP10.22□□□□□ -0.77
LINC00239-201ENST00000556973 DCDP81605 110 aaKnown RBP10.22□□□□□ -0.77
LINC00239-201ENST00000556973 TGFBIQ15582 683 aa10.22□□□□□ -0.77
LINC00239-201ENST00000556973 PTCHD3Q3KNS1 767 aa10.22□□□□□ -0.77
LINC00239-201ENST00000556973 FAM153CQ494X1 144 aa10.22□□□□□ -0.77
LINC00239-201ENST00000556973 LGSNQ5TDP6 509 aa10.22□□□□□ -0.77
LINC00239-201ENST00000556973 LCN10Q6JVE6 187 aa10.22□□□□□ -0.77
LINC00239-201ENST00000556973 TTLL10Q6ZVT0 673 aa10.22□□□□□ -0.77
LINC00239-201ENST00000556973 TAOK1Q7L7X3 1001 aa10.22□□□□□ -0.77
LINC00239-201ENST00000556973 ISCA2Q86U28 154 aa10.22□□□□□ -0.77
LINC00239-201ENST00000556973 GPSM1Q86YR5 675 aa10.22□□□□□ -0.77
LINC00239-201ENST00000556973 OR4N4Q8N0Y3 316 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms