RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 ARRDC1-AS1Q9H2J1 176 aa4.02□□□□□ -1.77
PRPF39-210ENST00000556718 DAPK2Q9UIK4 370 aa4.02□□□□□ -1.77
PRPF39-210ENST00000556718 PA2G4Q9UQ80 394 aaKnown RBP4.02□□□□□ -1.77
PRPF39-210ENST00000556718 SPAG9O60271 1321 aaKnown RBP4.01□□□□□ -1.77
PRPF39-210ENST00000556718 IGHV4OR15-8A0A075B7B6 117 aa4.01□□□□□ -1.77
PRPF39-210ENST00000556718 A0A1W2PPI3 338 aa4.01□□□□□ -1.77
PRPF39-210ENST00000556718 FAM149AA5PLN7 773 aa4.01□□□□□ -1.77
PRPF39-210ENST00000556718 ASPDHA6ND91 283 aa4.01□□□□□ -1.77
PRPF39-210ENST00000556718 ANKRD61A6NGH8 418 aa4.01□□□□□ -1.77
PRPF39-210ENST00000556718 CASTOR2A6NHX0 329 aa4.01□□□□□ -1.77
PRPF39-210ENST00000556718 TMEM150CB9EJG8 249 aa4.01□□□□□ -1.77
PRPF39-210ENST00000556718 RTCAO00442 366 aaKnown RBP4.01□□□□□ -1.77
PRPF39-210ENST00000556718 ARPC2O15144 300 aa4.01□□□□□ -1.77
PRPF39-210ENST00000556718 PRAF2O60831 178 aa4.01□□□□□ -1.77
PRPF39-210ENST00000556718 ZBTB11O95625 1053 aaPredicted RBP4.01□□□□□ -1.77
PRPF39-210ENST00000556718 UMODP07911 640 aa4.01□□□□□ -1.77
PRPF39-210ENST00000556718 HLA-DOBP13765 273 aa4.01□□□□□ -1.77
PRPF39-210ENST00000556718 VCLP18206 1134 aa4.01□□□□□ -1.77
PRPF39-210ENST00000556718 CD27P26842 260 aa4.01□□□□□ -1.77
PRPF39-210ENST00000556718 CALRP27797 417 aaKnown RBP4.01□□□□□ -1.77
PRPF39-210ENST00000556718 PIK3R1P27986 724 aa4.01□□□□□ -1.77
PRPF39-210ENST00000556718 THOP1P52888 689 aa4.01□□□□□ -1.77
PRPF39-210ENST00000556718 DVL1P1P54792 670 aaPredicted RBP4.01□□□□□ -1.77
PRPF39-210ENST00000556718 MBTD1Q05BQ5 628 aa4.01□□□□□ -1.77
PRPF39-210ENST00000556718 ZBTB17Q13105 803 aa4.01□□□□□ -1.77
PRPF39-210ENST00000556718 KIR2DS3Q14952 304 aa4.01□□□□□ -1.77
PRPF39-210ENST00000556718 NONOQ15233 471 aaKnown RBP eCLIP4.01□□□□□ -1.77
PRPF39-210ENST00000556718 TAF13Q15543 124 aa4.01□□□□□ -1.77
PRPF39-210ENST00000556718 KRT71Q3SY84 523 aa4.01□□□□□ -1.77
PRPF39-210ENST00000556718 SPSB3Q6PJ21 355 aa4.01□□□□□ -1.77
PRPF39-210ENST00000556718 CORO6Q6QEF8 472 aa4.01□□□□□ -1.77
PRPF39-210ENST00000556718 KCTD8Q6ZWB6 473 aa4.01□□□□□ -1.77
PRPF39-210ENST00000556718 EXOC3L1Q86VI1 746 aa4.01□□□□□ -1.77
PRPF39-210ENST00000556718 METTL27Q8N6F8 245 aaPredicted RBP4.01□□□□□ -1.77
PRPF39-210ENST00000556718 RTL3Q8N8U3 475 aaKnown RBP4.01□□□□□ -1.77
PRPF39-210ENST00000556718 LILRB1Q8NHL6 650 aaPredicted RBP4.01□□□□□ -1.77
PRPF39-210ENST00000556718 FGFBP3Q8TAT2 258 aa4.01□□□□□ -1.77
PRPF39-210ENST00000556718 LNX1Q8TBB1 728 aaPredicted RBP4.01□□□□□ -1.77
PRPF39-210ENST00000556718 ST7LQ8TDW4 575 aa4.01□□□□□ -1.77
PRPF39-210ENST00000556718 P2RX5Q93086 422 aa4.01□□□□□ -1.77
PRPF39-210ENST00000556718 AP2M1Q96CW1 435 aa4.01□□□□□ -1.77
PRPF39-210ENST00000556718 CFAP36Q96G28 342 aa4.01□□□□□ -1.77
PRPF39-210ENST00000556718 CDKN2AIPNLQ96HQ2 116 aa4.01□□□□□ -1.77
PRPF39-210ENST00000556718 RTP3Q9BQQ7 232 aa4.01□□□□□ -1.77
PRPF39-210ENST00000556718 ATG101Q9BSB4 218 aa4.01□□□□□ -1.77
PRPF39-210ENST00000556718 PI4K2AQ9BTU6 479 aa4.01□□□□□ -1.77
PRPF39-210ENST00000556718 CDK19Q9BWU1 502 aa4.01□□□□□ -1.77
PRPF39-210ENST00000556718 MTMR12Q9C0I1 747 aa4.01□□□□□ -1.77
PRPF39-210ENST00000556718 ZMYND12Q9H0C1 365 aa4.01□□□□□ -1.77
PRPF39-210ENST00000556718 NAPBQ9H115 298 aa4.01□□□□□ -1.77
PRPF39-210ENST00000556718 IL25Q9H293 177 aa4.01□□□□□ -1.77
PRPF39-210ENST00000556718 TNMDQ9H2S6 317 aa4.01□□□□□ -1.77
PRPF39-210ENST00000556718 ECHDC1Q9NTX5 307 aa4.01□□□□□ -1.77
PRPF39-210ENST00000556718 PTTG2Q9NZH5 202 aa4.01□□□□□ -1.77
PRPF39-210ENST00000556718 ZDHHC2Q9UIJ5 367 aa4.01□□□□□ -1.77
PRPF39-210ENST00000556718 HOOK1Q9UJC3 728 aaKnown RBP4.01□□□□□ -1.77
PRPF39-210ENST00000556718 RUVBL2Q9Y230 463 aaKnown RBP4.01□□□□□ -1.77
PRPF39-210ENST00000556718 WDR83OSQ9Y284 106 aa4.01□□□□□ -1.77
PRPF39-210ENST00000556718 SAA2-SAA4A0A096LPE2 208 aa4□□□□□ -1.77
PRPF39-210ENST00000556718 A0A1W2PPK0 400 aa4□□□□□ -1.77
PRPF39-210ENST00000556718 C5orf60A6NFR6 353 aa4□□□□□ -1.77
PRPF39-210ENST00000556718 SRRM3A6NNA2 597 aaPredicted RBP4□□□□□ -1.77
PRPF39-210ENST00000556718 CACNB4O00305 520 aaPredicted RBP4□□□□□ -1.77
PRPF39-210ENST00000556718 ATP9AO75110 1047 aa4□□□□□ -1.77
PRPF39-210ENST00000556718 GLCEO94923 617 aa4□□□□□ -1.77
PRPF39-210ENST00000556718 BAG4O95429 457 aaKnown RBP4□□□□□ -1.77
PRPF39-210ENST00000556718 CYP2A7P20853 494 aa4□□□□□ -1.77
PRPF39-210ENST00000556718 EPHA2P29317 976 aa4□□□□□ -1.77
PRPF39-210ENST00000556718 FMO5P49326 533 aa4□□□□□ -1.77
PRPF39-210ENST00000556718 CLK1P49759 484 aaKnown RBP4□□□□□ -1.77
PRPF39-210ENST00000556718 RPL24P83731 157 aaKnown RBP4□□□□□ -1.77
PRPF39-210ENST00000556718 AKAP17AQ02040 695 aaKnown RBP4□□□□□ -1.77
PRPF39-210ENST00000556718 IL10RBQ08334 325 aa4□□□□□ -1.77
PRPF39-210ENST00000556718 ZNF415Q09FC8 603 aa4□□□□□ -1.77
PRPF39-210ENST00000556718 KIF5AQ12840 1032 aa4□□□□□ -1.77
PRPF39-210ENST00000556718 LASP1Q14847 261 aaKnown RBP4□□□□□ -1.77
PRPF39-210ENST00000556718 MRGPRG-AS1Q2M3A8 158 aa4□□□□□ -1.77
PRPF39-210ENST00000556718 KIF19Q2TAC6 998 aa4□□□□□ -1.77
PRPF39-210ENST00000556718 ZNF718Q3SXZ3 478 aa4□□□□□ -1.77
PRPF39-210ENST00000556718 AARDQ4LEZ3 155 aa4□□□□□ -1.77
PRPF39-210ENST00000556718 SIRPB2Q5JXA9 342 aa4□□□□□ -1.77
PRPF39-210ENST00000556718 FAM46CQ5VWP2 391 aa4□□□□□ -1.77
PRPF39-210ENST00000556718 OR4A47Q6IF82 309 aa4□□□□□ -1.77
PRPF39-210ENST00000556718 FUT10Q6P4F1 479 aa4□□□□□ -1.77
PRPF39-210ENST00000556718 TOM1L2Q6ZVM7 507 aa4□□□□□ -1.77
PRPF39-210ENST00000556718 MEX3DQ86XN8 651 aaKnown RBP4□□□□□ -1.77
PRPF39-210ENST00000556718 TMEM139Q8IV31 216 aa4□□□□□ -1.77
PRPF39-210ENST00000556718 MMD2Q8IY49 270 aa4□□□□□ -1.77
PRPF39-210ENST00000556718 ZNF441Q8N8Z8 693 aa4□□□□□ -1.77
PRPF39-210ENST00000556718 KIAA0895Q8NCT3 520 aa4□□□□□ -1.77
PRPF39-210ENST00000556718 OR11H4Q8NGC9 324 aa4□□□□□ -1.77
PRPF39-210ENST00000556718 OR1J1Q8NGS3 322 aa4□□□□□ -1.77
PRPF39-210ENST00000556718 SECTM1Q8WVN6 248 aa4□□□□□ -1.77
PRPF39-210ENST00000556718 TSACCQ96A04 125 aaPredicted RBP4□□□□□ -1.77
PRPF39-210ENST00000556718 C5orf30Q96GV9 206 aa4□□□□□ -1.77
PRPF39-210ENST00000556718 DUX5Q96PT3 197 aa4□□□□□ -1.77
PRPF39-210ENST00000556718 C17orf62Q9BQA9 187 aa4□□□□□ -1.77
PRPF39-210ENST00000556718 SPXQ9BT56 116 aa4□□□□□ -1.77
PRPF39-210ENST00000556718 FSD1Q9BTV5 496 aa4□□□□□ -1.77
PRPF39-210ENST00000556718 NACAP1Q9BZK3 213 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms