RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 OR5T2Q8NGG2 359 aa2.15□□□□□ -2.07
SRP54-207ENST00000555535 RHOXF1Q8NHV9 184 aa2.15□□□□□ -2.07
SRP54-207ENST00000555535 ATF6BQ99941 703 aa2.15□□□□□ -2.07
SRP54-207ENST00000555535 CCDC28BQ9BUN5 200 aa2.15□□□□□ -2.07
SRP54-207ENST00000555535 MTHFD2LQ9H903 347 aaPredicted RBP2.15□□□□□ -2.07
SRP54-207ENST00000555535 ARHGEF38Q9NXL2 777 aa2.15□□□□□ -2.07
SRP54-207ENST00000555535 GTF2A1LQ9UNN4 478 aa2.15□□□□□ -2.07
SRP54-207ENST00000555535 WBP11Q9Y2W2 641 aaKnown RBP2.15□□□□□ -2.07
SRP54-207ENST00000555535 IGHV3-38A0A0C4DH36 116 aa2.14□□□□□ -2.07
SRP54-207ENST00000555535 OR2A25A4D2G3 310 aa2.14□□□□□ -2.07
SRP54-207ENST00000555535 MEIS2O14770 477 aa2.14□□□□□ -2.07
SRP54-207ENST00000555535 USO1O60763 962 aaKnown RBP2.14□□□□□ -2.07
SRP54-207ENST00000555535 SCGB1D1O95968 90 aa2.14□□□□□ -2.07
SRP54-207ENST00000555535 PRKAR1AP10644 381 aa2.14□□□□□ -2.07
SRP54-207ENST00000555535 MPZP25189 248 aa2.14□□□□□ -2.07
SRP54-207ENST00000555535 HNRNPKP61978 463 aaKnown RBP eCLIP2.14□□□□□ -2.07
SRP54-207ENST00000555535 GPR33Q49SQ1 333 aa2.14□□□□□ -2.07
SRP54-207ENST00000555535 FAM182AQ5T1J6 154 aa2.14□□□□□ -2.07
SRP54-207ENST00000555535 RNLSQ5VYX0 342 aa2.14□□□□□ -2.07
SRP54-207ENST00000555535 C11orf63Q6NUN7 778 aa2.14□□□□□ -2.07
SRP54-207ENST00000555535 C3P1Q6ZMU1 363 aa2.14□□□□□ -2.07
SRP54-207ENST00000555535 ZNF595Q8IYB9 648 aa2.14□□□□□ -2.07
SRP54-207ENST00000555535 LGI2Q8N0V4 545 aa2.14□□□□□ -2.07
SRP54-207ENST00000555535 TTC39CQ8N584 583 aa2.14□□□□□ -2.07
SRP54-207ENST00000555535 SSC4DQ8WTU2 575 aa2.14□□□□□ -2.07
SRP54-207ENST00000555535 SAT2Q96F10 170 aaPredicted RBP2.14□□□□□ -2.07
SRP54-207ENST00000555535 PAFAH2Q99487 392 aa2.14□□□□□ -2.07
SRP54-207ENST00000555535 JPT2Q9H910 190 aa2.14□□□□□ -2.07
SRP54-207ENST00000555535 BAIAP2L1Q9UHR4 511 aa2.14□□□□□ -2.07
SRP54-207ENST00000555535 FBXO2Q9UK22 296 aaPredicted RBP2.14□□□□□ -2.07
SRP54-207ENST00000555535 PLCL2Q9UPR0 1127 aa2.14□□□□□ -2.07
SRP54-207ENST00000555535 PA2G4Q9UQ80 394 aaKnown RBP2.14□□□□□ -2.07
SRP54-207ENST00000555535 TRBV4-1A0A0J9YWV2 114 aa2.13□□□□□ -2.07
SRP54-207ENST00000555535 GLTPD2A6NH11 291 aa2.13□□□□□ -2.07
SRP54-207ENST00000555535 ARPC2O15144 300 aa2.13□□□□□ -2.07
SRP54-207ENST00000555535 ADAMDEC1O15204 470 aa2.13□□□□□ -2.07
SRP54-207ENST00000555535 ECE2O60344 883 aa2.13□□□□□ -2.07
SRP54-207ENST00000555535 BCL10O95999 233 aa2.13□□□□□ -2.07
SRP54-207ENST00000555535 CD4P01730 458 aa2.13□□□□□ -2.07
SRP54-207ENST00000555535 IGHV2-70P01814 119 aa2.13□□□□□ -2.07
SRP54-207ENST00000555535 THY1P04216 161 aa2.13□□□□□ -2.07
SRP54-207ENST00000555535 IGKV3-11P04433 115 aa2.13□□□□□ -2.07
SRP54-207ENST00000555535 DANCRP0C864 163 aa2.13□□□□□ -2.07
SRP54-207ENST00000555535 PCP11498 1178 aaKnown RBP2.13□□□□□ -2.07
SRP54-207ENST00000555535 TRIM21P19474 475 aaKnown RBP2.13□□□□□ -2.07
SRP54-207ENST00000555535 CD27P26842 260 aa2.13□□□□□ -2.07
SRP54-207ENST00000555535 MAN1A1P33908 653 aa2.13□□□□□ -2.07
SRP54-207ENST00000555535 SLC15A1P46059 708 aa2.13□□□□□ -2.07
SRP54-207ENST00000555535 KRTAP10-10P60014 251 aa2.13□□□□□ -2.07
SRP54-207ENST00000555535 XKR4Q5GH76 650 aa2.13□□□□□ -2.07
SRP54-207ENST00000555535 NUP54Q7Z3B4 507 aa2.13□□□□□ -2.07
SRP54-207ENST00000555535 CSNK1G2-AS1Q8NCQ2 148 aa2.13□□□□□ -2.07
SRP54-207ENST00000555535 OR10G7Q8NGN6 311 aa2.13□□□□□ -2.07
SRP54-207ENST00000555535 EXD1Q8NHP7 514 aa2.13□□□□□ -2.07
SRP54-207ENST00000555535 MRAPQ8TCY5 172 aa2.13□□□□□ -2.07
SRP54-207ENST00000555535 NSMAFQ92636 917 aa2.13□□□□□ -2.07
SRP54-207ENST00000555535 SPDL1Q96EA4 605 aa2.13□□□□□ -2.07
SRP54-207ENST00000555535 THOC1Q96FV9 657 aaKnown RBP2.13□□□□□ -2.07
SRP54-207ENST00000555535 MS4A10Q96PG2 267 aa2.13□□□□□ -2.07
SRP54-207ENST00000555535 MMP27Q9H306 513 aa2.13□□□□□ -2.07
SRP54-207ENST00000555535 OLA1Q9NTK5 396 aaKnown RBP2.13□□□□□ -2.07
SRP54-207ENST00000555535 LNPEPQ9UIQ6 1025 aa2.13□□□□□ -2.07
SRP54-207ENST00000555535 IKZF3Q9UKT9 509 aa2.13□□□□□ -2.07
SRP54-207ENST00000555535 PADI2Q9Y2J8 665 aa2.13□□□□□ -2.07
SRP54-207ENST00000555535 ZNF644Q9H582 1327 aaPredicted RBP2.13□□□□□ -2.07
SRP54-207ENST00000555535 A0A087X0M5 115 aa2.12□□□□□ -2.07
SRP54-207ENST00000555535 IGHV3-20A0A0C4DH32 117 aa2.12□□□□□ -2.07
SRP54-207ENST00000555535 A0A1B0GX30 115 aa2.12□□□□□ -2.07
SRP54-207ENST00000555535 O00370 1275 aa2.12□□□□□ -2.07
SRP54-207ENST00000555535 HAT1O14929 419 aa2.12□□□□□ -2.07
SRP54-207ENST00000555535 KRT33AO76009 404 aa2.12□□□□□ -2.07
SRP54-207ENST00000555535 ATP1B1P05026 303 aa2.12□□□□□ -2.07
SRP54-207ENST00000555535 MYOGP15173 224 aa2.12□□□□□ -2.07
SRP54-207ENST00000555535 ZNF32P17041 273 aa2.12□□□□□ -2.07
SRP54-207ENST00000555535 AOC1P19801 751 aa2.12□□□□□ -2.07
SRP54-207ENST00000555535 DNASE1P24855 282 aa2.12□□□□□ -2.07
SRP54-207ENST00000555535 ELAVL4P26378 380 aaKnown RBP2.12□□□□□ -2.07
SRP54-207ENST00000555535 CDH13P55290 713 aa2.12□□□□□ -2.07
SRP54-207ENST00000555535 FKBP3Q00688 224 aaKnown RBP2.12□□□□□ -2.07
SRP54-207ENST00000555535 MYL7Q01449 175 aa2.12□□□□□ -2.07
SRP54-207ENST00000555535 AIMP2Q13155 320 aaKnown RBP2.12□□□□□ -2.07
SRP54-207ENST00000555535 IGSF11Q5DX21 431 aa2.12□□□□□ -2.07
SRP54-207ENST00000555535 RAB41Q5JT25 222 aa2.12□□□□□ -2.07
SRP54-207ENST00000555535 TMEM211Q6ICI0 200 aa2.12□□□□□ -2.07
SRP54-207ENST00000555535 MMS22LQ6ZRQ5 1243 aa2.12□□□□□ -2.07
SRP54-207ENST00000555535 OR10Q1Q8NGQ4 319 aa2.12□□□□□ -2.07
SRP54-207ENST00000555535 PTPMT1Q8WUK0 201 aaPredicted RBP2.12□□□□□ -2.07
SRP54-207ENST00000555535 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.12□□□□□ -2.07
SRP54-207ENST00000555535 SYN2Q92777 582 aaPredicted RBP2.12□□□□□ -2.07
SRP54-207ENST00000555535 SERAC1Q96JX3 654 aa2.12□□□□□ -2.07
SRP54-207ENST00000555535 MTMR12Q9C0I1 747 aa2.12□□□□□ -2.07
SRP54-207ENST00000555535 SMARCAD1Q9H4L7 1026 aa2.12□□□□□ -2.07
SRP54-207ENST00000555535 OPA3Q9H6K4 179 aa2.12□□□□□ -2.07
SRP54-207ENST00000555535 EQTNQ9NQ60 294 aa2.12□□□□□ -2.07
SRP54-207ENST00000555535 KRT84Q9NSB2 600 aa2.12□□□□□ -2.07
SRP54-207ENST00000555535 ZNF581Q9P0T4 197 aa2.12□□□□□ -2.07
SRP54-207ENST00000555535 SUCLA2Q9P2R7 463 aaPredicted RBP2.12□□□□□ -2.07
SRP54-207ENST00000555535 WDR83OSQ9Y284 106 aa2.12□□□□□ -2.07
SRP54-207ENST00000555535 PI4KAP2A4QPH2 592 aa2.11□□□□□ -2.07
SRP54-207ENST00000555535 PGPEP1LA6NFU8 196 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 516.6 ms