RNA–Protein interactions for RNA: ENST00000555269.5

TRAPPC6B-205, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best)

Gene TRAPPC6B, Length 1,000 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-205ENST00000555269 TRIM44Q96DX7 344 aaPredicted RBP11.89□□□□□ -0.51
TRAPPC6B-205ENST00000555269 MED8Q96G25 268 aa11.89□□□□□ -0.51
TRAPPC6B-205ENST00000555269 ZNF285Q96NJ3 590 aa11.89□□□□□ -0.51
TRAPPC6B-205ENST00000555269 PRAP1Q96NZ9 151 aa11.89□□□□□ -0.51
TRAPPC6B-205ENST00000555269 GBP5Q96PP8 586 aa11.89□□□□□ -0.51
TRAPPC6B-205ENST00000555269 SELENOSQ9BQE4 189 aa11.89□□□□□ -0.51
TRAPPC6B-205ENST00000555269 PLCD4Q9BRC7 762 aa11.89□□□□□ -0.51
TRAPPC6B-205ENST00000555269 NDC1Q9BTX1 674 aa11.89□□□□□ -0.51
TRAPPC6B-205ENST00000555269 NLNQ9BYT8 704 aa11.89□□□□□ -0.51
TRAPPC6B-205ENST00000555269 UNKQ9C0B0 810 aaKnown RBP11.89□□□□□ -0.51
TRAPPC6B-205ENST00000555269 CAB39LQ9H9S4 337 aa11.89□□□□□ -0.51
TRAPPC6B-205ENST00000555269 SLC22A11Q9NSA0 550 aa11.89□□□□□ -0.51
TRAPPC6B-205ENST00000555269 CUEDC1Q9NWM3 386 aaPredicted RBP11.89□□□□□ -0.51
TRAPPC6B-205ENST00000555269 NDOR1Q9UHB4 597 aa11.89□□□□□ -0.51
TRAPPC6B-205ENST00000555269 CORO1CQ9ULV4 474 aaPredicted RBP11.89□□□□□ -0.51
TRAPPC6B-205ENST00000555269 SH2B3Q9UQQ2 575 aa11.89□□□□□ -0.51
TRAPPC6B-205ENST00000555269 BOD1L1Q8NFC6 3051 aa11.89□□□□□ -0.51
TRAPPC6B-205ENST00000555269 ZNF839A8K0R7 811 aa11.88□□□□□ -0.51
TRAPPC6B-205ENST00000555269 H0YGG7 62 aa11.88□□□□□ -0.51
TRAPPC6B-205ENST00000555269 SRPX2O60687 465 aaPredicted RBP11.88□□□□□ -0.51
TRAPPC6B-205ENST00000555269 CNOT3O75175 753 aaKnown RBP11.88□□□□□ -0.51
TRAPPC6B-205ENST00000555269 GUCA1CO95843 209 aa11.88□□□□□ -0.51
TRAPPC6B-205ENST00000555269 RAB40ALP0C0E4 278 aa11.88□□□□□ -0.51
TRAPPC6B-205ENST00000555269 ITGAXP20702 1163 aa11.88□□□□□ -0.51
TRAPPC6B-205ENST00000555269 AGXTP21549 392 aa11.88□□□□□ -0.51
TRAPPC6B-205ENST00000555269 GMPRP36959 345 aa11.88□□□□□ -0.51
TRAPPC6B-205ENST00000555269 CCR10P46092 362 aa11.88□□□□□ -0.51
TRAPPC6B-205ENST00000555269 GCGRP47871 477 aa11.88□□□□□ -0.51
TRAPPC6B-205ENST00000555269 ARF3P61204 181 aaPredicted RBP11.88□□□□□ -0.51
TRAPPC6B-205ENST00000555269 IL10RAQ13651 578 aa11.88□□□□□ -0.51
TRAPPC6B-205ENST00000555269 KBTBD12Q3ZCT8 623 aa11.88□□□□□ -0.51
TRAPPC6B-205ENST00000555269 CRTC2Q53ET0 693 aaPredicted RBP11.88□□□□□ -0.51
TRAPPC6B-205ENST00000555269 ZNF425Q6IV72 752 aa11.88□□□□□ -0.51
TRAPPC6B-205ENST00000555269 LRRC8EQ6NSJ5 796 aa11.88□□□□□ -0.51
TRAPPC6B-205ENST00000555269 AGTRAPQ6RW13 159 aa11.88□□□□□ -0.51
TRAPPC6B-205ENST00000555269 CTAGE3PQ8IX95 158 aa11.88□□□□□ -0.51
TRAPPC6B-205ENST00000555269 PPM1NQ8N819 430 aa11.88□□□□□ -0.51
TRAPPC6B-205ENST00000555269 KIF18AQ8NI77 898 aa11.88□□□□□ -0.51
TRAPPC6B-205ENST00000555269 APOBEC4Q8WW27 367 aaKnown RBP11.88□□□□□ -0.51
TRAPPC6B-205ENST00000555269 IFT81Q8WYA0 676 aa11.88□□□□□ -0.51
TRAPPC6B-205ENST00000555269 PYCR2Q96C36 320 aa11.88□□□□□ -0.51
TRAPPC6B-205ENST00000555269 PDLIM5Q96HC4 596 aaKnown RBP11.88□□□□□ -0.51
TRAPPC6B-205ENST00000555269 VPS39Q96JC1 886 aa11.88□□□□□ -0.51
TRAPPC6B-205ENST00000555269 CATSPER2Q96P56 530 aa11.88□□□□□ -0.51
TRAPPC6B-205ENST00000555269 RHOJQ9H4E5 214 aa11.88□□□□□ -0.51
TRAPPC6B-205ENST00000555269 CUTCQ9NTM9 273 aa11.88□□□□□ -0.51
TRAPPC6B-205ENST00000555269 TXLNGQ9NUQ3 528 aa11.88□□□□□ -0.51
TRAPPC6B-205ENST00000555269 NSMCE4AQ9NXX6 385 aa11.88□□□□□ -0.51
TRAPPC6B-205ENST00000555269 UTP6Q9NYH9 597 aaKnown RBP11.88□□□□□ -0.51
TRAPPC6B-205ENST00000555269 TCFL5Q9UL49 500 aa11.88□□□□□ -0.51
TRAPPC6B-205ENST00000555269 SNX7Q9UNH6 387 aa11.88□□□□□ -0.51
TRAPPC6B-205ENST00000555269 KCNMB2Q9Y691 235 aa11.88□□□□□ -0.51
TRAPPC6B-205ENST00000555269 HYKKA2RU49 373 aa11.87□□□□□ -0.51
TRAPPC6B-205ENST00000555269 CTAGE15A4D2H0 777 aa11.87□□□□□ -0.51
TRAPPC6B-205ENST00000555269 HAT1O14929 419 aa11.87□□□□□ -0.51
TRAPPC6B-205ENST00000555269 KLF7O75840 302 aaPredicted RBP11.87□□□□□ -0.51
TRAPPC6B-205ENST00000555269 RECKO95980 971 aa11.87□□□□□ -0.51
TRAPPC6B-205ENST00000555269 STATHP02808 62 aa11.87□□□□□ -0.51
TRAPPC6B-205ENST00000555269 TUBB4AP04350 444 aa11.87□□□□□ -0.51
TRAPPC6B-205ENST00000555269 GSTA2P09210 222 aa11.87□□□□□ -0.51
TRAPPC6B-205ENST00000555269 HIST1H2AGP0C0S8 130 aaPredicted RBP11.87□□□□□ -0.51
TRAPPC6B-205ENST00000555269 CTAGE8P0CG41 777 aa11.87□□□□□ -0.51
TRAPPC6B-205ENST00000555269 NPPBP16860 134 aa11.87□□□□□ -0.51
TRAPPC6B-205ENST00000555269 HIST1H2ADP20671 130 aa11.87□□□□□ -0.51
TRAPPC6B-205ENST00000555269 OR1D4P47884 311 aa11.87□□□□□ -0.51
TRAPPC6B-205ENST00000555269 POLE2P56282 527 aa11.87□□□□□ -0.51
TRAPPC6B-205ENST00000555269 SP140Q13342 867 aa11.87□□□□□ -0.51
TRAPPC6B-205ENST00000555269 GRM7Q14831 915 aa11.87□□□□□ -0.51
TRAPPC6B-205ENST00000555269 EFTUD2Q15029 972 aaKnown RBP eCLIP11.87□□□□□ -0.51
TRAPPC6B-205ENST00000555269 NCF4Q15080 339 aa11.87□□□□□ -0.51
TRAPPC6B-205ENST00000555269 UGT8Q16880 541 aa11.87□□□□□ -0.51
TRAPPC6B-205ENST00000555269 NKAIN1Q4KMZ8 207 aa11.87□□□□□ -0.51
TRAPPC6B-205ENST00000555269 TCTE1Q5JU00 501 aa11.87□□□□□ -0.51
TRAPPC6B-205ENST00000555269 ADCK2Q7Z695 626 aa11.87□□□□□ -0.51
TRAPPC6B-205ENST00000555269 SYVN1Q86TM6 617 aa11.87□□□□□ -0.51
TRAPPC6B-205ENST00000555269 CTAGE6Q86UF2 777 aa11.87□□□□□ -0.51
TRAPPC6B-205ENST00000555269 CTAGE4Q8IX94 777 aa11.87□□□□□ -0.51
TRAPPC6B-205ENST00000555269 METTL27Q8N6F8 245 aaPredicted RBP11.87□□□□□ -0.51
TRAPPC6B-205ENST00000555269 MNS1Q8NEH6 495 aa11.87□□□□□ -0.51
TRAPPC6B-205ENST00000555269 CDKL2Q92772 493 aa11.87□□□□□ -0.51
TRAPPC6B-205ENST00000555269 MRRFQ96E11 262 aaKnown RBP11.87□□□□□ -0.51
TRAPPC6B-205ENST00000555269 HIST1H2AHQ96KK5 128 aa11.87□□□□□ -0.51
TRAPPC6B-205ENST00000555269 OR2A5Q96R48 311 aa11.87□□□□□ -0.51
TRAPPC6B-205ENST00000555269 CPNE1Q99829 537 aa11.87□□□□□ -0.51
TRAPPC6B-205ENST00000555269 HIST1H2AJQ99878 128 aa11.87□□□□□ -0.51
TRAPPC6B-205ENST00000555269 ZFYVE21Q9BQ24 234 aa11.87□□□□□ -0.51
TRAPPC6B-205ENST00000555269 MACROD1Q9BQ69 325 aa11.87□□□□□ -0.51
TRAPPC6B-205ENST00000555269 DPH2Q9BQC3 489 aaPredicted RBP11.87□□□□□ -0.51
TRAPPC6B-205ENST00000555269 H2AFJQ9BTM1 129 aa11.87□□□□□ -0.51
TRAPPC6B-205ENST00000555269 ARL15Q9NXU5 204 aa11.87□□□□□ -0.51
TRAPPC6B-205ENST00000555269 IFT80Q9P2H3 777 aaPredicted RBP11.87□□□□□ -0.51
TRAPPC6B-205ENST00000555269 MAU2Q9Y6X3 613 aa11.87□□□□□ -0.51
TRAPPC6B-205ENST00000555269 PCM1Q15154 2024 aa11.86□□□□□ -0.51
TRAPPC6B-205ENST00000555269 FITM1A5D6W6 292 aa11.86□□□□□ -0.51
TRAPPC6B-205ENST00000555269 NPEPPSL1A6NEC2 478 aa11.86□□□□□ -0.51
TRAPPC6B-205ENST00000555269 KIF2AO00139 706 aaPredicted RBP11.86□□□□□ -0.51
TRAPPC6B-205ENST00000555269 PHGDHO43175 533 aaKnown RBP11.86□□□□□ -0.51
TRAPPC6B-205ENST00000555269 LCMT2O60294 686 aaKnown RBP11.86□□□□□ -0.51
TRAPPC6B-205ENST00000555269 DNAJB5O75953 348 aa11.86□□□□□ -0.51
TRAPPC6B-205ENST00000555269 ZNF37AP17032 561 aaPredicted RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms