RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 EBPLQ9BY08 206 aa11.34□□□□□ -0.59
SHMT2-212ENST00000554467 LRTM1Q9HBL6 345 aa11.34□□□□□ -0.59
SHMT2-212ENST00000554467 PLAGL1Q9UM63 463 aa11.34□□□□□ -0.59
SHMT2-212ENST00000554467 RGS14O43566 566 aa11.33□□□□□ -0.6
SHMT2-212ENST00000554467 SLCO2B1O94956 709 aa11.33□□□□□ -0.6
SHMT2-212ENST00000554467 ZNF8P17098 575 aaPredicted RBP11.33□□□□□ -0.6
SHMT2-212ENST00000554467 CD22P20273 847 aa11.33□□□□□ -0.6
SHMT2-212ENST00000554467 TACR1P25103 407 aa11.33□□□□□ -0.6
SHMT2-212ENST00000554467 PRLHRP49683 370 aa11.33□□□□□ -0.6
SHMT2-212ENST00000554467 PRKG2Q13237 762 aa11.33□□□□□ -0.6
SHMT2-212ENST00000554467 SF3B4Q15427 424 aaKnown RBP eCLIP11.33□□□□□ -0.63e-8■■■■■ 35.5
SHMT2-212ENST00000554467 KCNJ8Q15842 424 aa11.33□□□□□ -0.6
SHMT2-212ENST00000554467 ZNF547Q8IVP9 402 aa11.33□□□□□ -0.6
SHMT2-212ENST00000554467 ROPN1LQ96C74 230 aa11.33□□□□□ -0.6
SHMT2-212ENST00000554467 EGLN2Q96KS0 407 aa11.33□□□□□ -0.6
SHMT2-212ENST00000554467 ZNF597Q96LX8 424 aa11.33□□□□□ -0.6
SHMT2-212ENST00000554467 CGREF1Q99674 301 aa11.33□□□□□ -0.6
SHMT2-212ENST00000554467 MYOCQ99972 504 aa11.33□□□□□ -0.6
SHMT2-212ENST00000554467 LGR4Q9BXB1 951 aa11.33□□□□□ -0.6
SHMT2-212ENST00000554467 TUBA8Q9NY65 449 aaPredicted RBP11.33□□□□□ -0.6
SHMT2-212ENST00000554467 SUCOQ9UBS9 1254 aaKnown RBP11.33□□□□□ -0.6
SHMT2-212ENST00000554467 KRBA1A5PL33 1030 aa11.33□□□□□ -0.6
SHMT2-212ENST00000554467 BBIP1A8MTZ0 92 aa11.33□□□□□ -0.6
SHMT2-212ENST00000554467 A8MU76 341 aa11.33□□□□□ -0.6
SHMT2-212ENST00000554467 BMP10O95393 424 aa11.33□□□□□ -0.6
SHMT2-212ENST00000554467 POU2F2P09086 479 aa11.33□□□□□ -0.6
SHMT2-212ENST00000554467 SLC6A12P48065 614 aa11.33□□□□□ -0.6
SHMT2-212ENST00000554467 RAB15P59190 212 aa11.33□□□□□ -0.6
SHMT2-212ENST00000554467 XKR6Q5GH73 641 aa11.33□□□□□ -0.6
SHMT2-212ENST00000554467 SPANXN4Q5MJ08 99 aa11.33□□□□□ -0.6
SHMT2-212ENST00000554467 ANKRD46Q86W74 232 aa11.33□□□□□ -0.6
SHMT2-212ENST00000554467 DHFR2Q86XF0 187 aa11.33□□□□□ -0.6
SHMT2-212ENST00000554467 AADATQ8N5Z0 425 aa11.33□□□□□ -0.6
SHMT2-212ENST00000554467 TMIEQ8NEW7 156 aa11.33□□□□□ -0.6
SHMT2-212ENST00000554467 CXorf40AQ8TE69 158 aa11.33□□□□□ -0.6
SHMT2-212ENST00000554467 SLCO4A1Q96BD0 722 aa11.33□□□□□ -0.6
SHMT2-212ENST00000554467 PKP4Q99569 1192 aa11.33□□□□□ -0.6
SHMT2-212ENST00000554467 HEBP1Q9NRV9 189 aa11.33□□□□□ -0.6
SHMT2-212ENST00000554467 MRGBPQ9NV56 204 aa11.33□□□□□ -0.6
SHMT2-212ENST00000554467 DNAJC11Q9NVH1 559 aa11.33□□□□□ -0.6
SHMT2-212ENST00000554467 STON1Q9Y6Q2 735 aa11.33□□□□□ -0.6
SHMT2-212ENST00000554467 A0A1W2PP55 124 aa11.32□□□□□ -0.6
SHMT2-212ENST00000554467 FAM234BA2RU67 622 aa11.32□□□□□ -0.6
SHMT2-212ENST00000554467 H3BM21 787 aa11.32□□□□□ -0.6
SHMT2-212ENST00000554467 ANKRD28O15084 1053 aa11.32□□□□□ -0.6
SHMT2-212ENST00000554467 LATO43561 262 aa11.32□□□□□ -0.6
SHMT2-212ENST00000554467 MPC1LP0DKB6 136 aa11.32□□□□□ -0.6
SHMT2-212ENST00000554467 GNPDA1P46926 289 aa11.32□□□□□ -0.6
SHMT2-212ENST00000554467 MLLT10P55197 1068 aa11.32□□□□□ -0.6
SHMT2-212ENST00000554467 FCHO2Q0JRZ9 810 aa11.32□□□□□ -0.6
SHMT2-212ENST00000554467 ANKRD26P1Q6NSI1 321 aa11.32□□□□□ -0.6
SHMT2-212ENST00000554467 ANKRD54Q6NXT1 300 aa11.32□□□□□ -0.6
SHMT2-212ENST00000554467 ZFP1Q6P2D0 407 aa11.32□□□□□ -0.6
SHMT2-212ENST00000554467 AGTRAPQ6RW13 159 aa11.32□□□□□ -0.6
SHMT2-212ENST00000554467 ZBTB49Q6ZSB9 765 aa11.32□□□□□ -0.6
SHMT2-212ENST00000554467 BTLAQ7Z6A9 289 aa11.32□□□□□ -0.6
SHMT2-212ENST00000554467 ZFAND4Q86XD8 727 aa11.32□□□□□ -0.6
SHMT2-212ENST00000554467 CANT1Q8WVQ1 401 aa11.32□□□□□ -0.6
SHMT2-212ENST00000554467 TIFAQ96CG3 184 aa11.32□□□□□ -0.6
SHMT2-212ENST00000554467 APIPQ96GX9 242 aa11.32□□□□□ -0.6
SHMT2-212ENST00000554467 APOLD1Q96LR9 279 aa11.32□□□□□ -0.6
SHMT2-212ENST00000554467 GID8Q9NWU2 228 aa11.32□□□□□ -0.6
SHMT2-212ENST00000554467 STOX2Q9P2F5 926 aaPredicted RBP11.32□□□□□ -0.6
SHMT2-212ENST00000554467 MYRFQ9Y2G1 1151 aa11.32□□□□□ -0.6
SHMT2-212ENST00000554467 OR1A2Q9Y585 309 aa11.32□□□□□ -0.6
SHMT2-212ENST00000554467 COL4A3Q01955 1670 aa11.32□□□□□ -0.6
SHMT2-212ENST00000554467 RNF103-CHMP3A0A140T963 221 aa11.32□□□□□ -0.6
SHMT2-212ENST00000554467 AP2A2O94973 939 aa11.32□□□□□ -0.6
SHMT2-212ENST00000554467 CLIC3O95833 236 aa11.32□□□□□ -0.6
SHMT2-212ENST00000554467 EFNA1P20827 205 aaPredicted RBP11.32□□□□□ -0.6
SHMT2-212ENST00000554467 IRF8Q02556 426 aa11.32□□□□□ -0.6
SHMT2-212ENST00000554467 STARD3Q14849 445 aa11.32□□□□□ -0.6
SHMT2-212ENST00000554467 EIF4HQ15056 248 aaKnown RBP11.32□□□□□ -0.6
SHMT2-212ENST00000554467 FAM83HQ6ZRV2 1179 aaPredicted RBP11.32□□□□□ -0.6
SHMT2-212ENST00000554467 VASH1Q7L8A9 365 aaPredicted RBP11.32□□□□□ -0.6
SHMT2-212ENST00000554467 CYP2U1Q7Z449 544 aa11.32□□□□□ -0.6
SHMT2-212ENST00000554467 THOC6Q86W42 341 aaKnown RBP11.32□□□□□ -0.6
SHMT2-212ENST00000554467 GANCQ8TET4 914 aa11.32□□□□□ -0.6
SHMT2-212ENST00000554467 TMEM125Q96AQ2 219 aa11.32□□□□□ -0.6
SHMT2-212ENST00000554467 MRPL38Q96DV4 380 aaKnown RBP11.32□□□□□ -0.6
SHMT2-212ENST00000554467 THAP11Q96EK4 314 aa11.32□□□□□ -0.6
SHMT2-212ENST00000554467 PPP1R16AQ96I34 528 aa11.32□□□□□ -0.6
SHMT2-212ENST00000554467 PPP3R2Q96LZ3 170 aa11.32□□□□□ -0.6
SHMT2-212ENST00000554467 IL17FQ96PD4 163 aa11.32□□□□□ -0.6
SHMT2-212ENST00000554467 VPS35Q96QK1 796 aa11.32□□□□□ -0.6
SHMT2-212ENST00000554467 OR4K3Q96R72 315 aa11.32□□□□□ -0.6
SHMT2-212ENST00000554467 NANOGQ9H9S0 305 aa11.32□□□□□ -0.6
SHMT2-212ENST00000554467 TRPS1Q9UHF7 1281 aa11.32□□□□□ -0.6
SHMT2-212ENST00000554467 SH2B3Q9UQQ2 575 aa11.32□□□□□ -0.6
SHMT2-212ENST00000554467 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.32□□□□□ -0.6
SHMT2-212ENST00000554467 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.32□□□□□ -0.6
SHMT2-212ENST00000554467 SLC5A10A0PJK1 596 aa11.32□□□□□ -0.6
SHMT2-212ENST00000554467 EEDO75530 441 aaKnown RBP11.32□□□□□ -0.6
SHMT2-212ENST00000554467 KRT6AP02538 564 aa11.32□□□□□ -0.6
SHMT2-212ENST00000554467 KRT6BP04259 564 aa11.32□□□□□ -0.6
SHMT2-212ENST00000554467 GNAO1P09471 354 aa11.32□□□□□ -0.6
SHMT2-212ENST00000554467 GSTM1P09488 218 aa11.32□□□□□ -0.6
SHMT2-212ENST00000554467 BCKDHAP12694 445 aa11.32□□□□□ -0.6
SHMT2-212ENST00000554467 DRD3P35462 400 aa11.32□□□□□ -0.6
SHMT2-212ENST00000554467 KRT6CP48668 564 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms