RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 TEX264Q9Y6I9 313 aa17.4■□□□□ 0.38
SHMT2-206ENST00000553529 MDC1Q14676 2089 aaKnown RBP17.4■□□□□ 0.38
SHMT2-206ENST00000553529 PCM1Q15154 2024 aa17.39■□□□□ 0.37
SHMT2-206ENST00000553529 FITM1A5D6W6 292 aa17.39■□□□□ 0.37
SHMT2-206ENST00000553529 SOCS6O14544 535 aa17.39■□□□□ 0.37
SHMT2-206ENST00000553529 VPS26AO75436 327 aa17.39■□□□□ 0.37
SHMT2-206ENST00000553529 SEC31AO94979 1220 aaKnown RBP17.39■□□□□ 0.37
SHMT2-206ENST00000553529 TSPAN12O95859 305 aa17.39■□□□□ 0.37
SHMT2-206ENST00000553529 CMPK1P30085 196 aa17.39■□□□□ 0.37
SHMT2-206ENST00000553529 TBPL1P62380 186 aa17.39■□□□□ 0.37
SHMT2-206ENST00000553529 GRM7Q14831 915 aa17.39■□□□□ 0.37
SHMT2-206ENST00000553529 TRADDQ15628 312 aa17.39■□□□□ 0.37
SHMT2-206ENST00000553529 ZC3H12BQ5HYM0 836 aaKnown RBP17.39■□□□□ 0.37
SHMT2-206ENST00000553529 PRSS41Q7RTY9 318 aa17.39■□□□□ 0.37
SHMT2-206ENST00000553529 ADCK2Q7Z695 626 aa17.39■□□□□ 0.37
SHMT2-206ENST00000553529 CNTN4Q8IWV2 1026 aa17.39■□□□□ 0.37
SHMT2-206ENST00000553529 RBMXL3Q8N7X1 1067 aaKnown RBP17.39■□□□□ 0.37
SHMT2-206ENST00000553529 GPATCH11Q8N954 259 aa17.39■□□□□ 0.37
SHMT2-206ENST00000553529 Q8NA96 180 aa17.39■□□□□ 0.37
SHMT2-206ENST00000553529 ZUFSPQ96AP4 578 aa17.39■□□□□ 0.37
SHMT2-206ENST00000553529 LINGO1Q96FE5 620 aa17.39■□□□□ 0.37
SHMT2-206ENST00000553529 ZFYVE21Q9BQ24 234 aa17.39■□□□□ 0.37
SHMT2-206ENST00000553529 UNKQ9C0B0 810 aaKnown RBP17.39■□□□□ 0.37
SHMT2-206ENST00000553529 DPH5Q9H2P9 285 aa17.39■□□□□ 0.37
SHMT2-206ENST00000553529 SMYD2Q9NRG4 433 aa17.39■□□□□ 0.37
SHMT2-206ENST00000553529 TRMT6Q9UJA5 497 aaKnown RBP17.39■□□□□ 0.37
SHMT2-206ENST00000553529 VPS9D1Q9Y2B5 631 aa17.39■□□□□ 0.37
SHMT2-206ENST00000553529 PADI2Q9Y2J8 665 aa17.39■□□□□ 0.37
SHMT2-206ENST00000553529 KLK4Q9Y5K2 254 aa17.39■□□□□ 0.37
SHMT2-206ENST00000553529 HEATR5BQ9P2D3 2071 aa17.39■□□□□ 0.37
SHMT2-206ENST00000553529 TARM1B6A8C7 271 aa17.38■□□□□ 0.37
SHMT2-206ENST00000553529 H7BY64 318 aa17.38■□□□□ 0.37
SHMT2-206ENST00000553529 GMPRP36959 345 aa17.38■□□□□ 0.37
SHMT2-206ENST00000553529 SKIV2L2P42285 1042 aaKnown RBP17.38■□□□□ 0.37
SHMT2-206ENST00000553529 MAT1AQ00266 395 aaKnown RBP17.38■□□□□ 0.37
SHMT2-206ENST00000553529 SSPNQ14714 243 aa17.38■□□□□ 0.37
SHMT2-206ENST00000553529 PRTGQ2VWP7 1150 aa17.38■□□□□ 0.37
SHMT2-206ENST00000553529 TTLL9Q3SXZ7 439 aa17.38■□□□□ 0.37
SHMT2-206ENST00000553529 VWA2Q5GFL6 755 aa17.38■□□□□ 0.37
SHMT2-206ENST00000553529 DCAF10Q5QP82 559 aa17.38■□□□□ 0.37
SHMT2-206ENST00000553529 HECTD2Q5U5R9 776 aa17.38■□□□□ 0.37
SHMT2-206ENST00000553529 ARMC3Q5W041 872 aa17.38■□□□□ 0.37
SHMT2-206ENST00000553529 NEK10Q6ZWH5 1172 aa17.38■□□□□ 0.37
SHMT2-206ENST00000553529 OVCH1Q7RTY7 1134 aa17.38■□□□□ 0.37
SHMT2-206ENST00000553529 LAPTM4BQ86VI4 370 aa17.38■□□□□ 0.37
SHMT2-206ENST00000553529 RAB43Q86YS6 212 aa17.38■□□□□ 0.37
SHMT2-206ENST00000553529 ARHGEF39Q8N4T4 335 aa17.38■□□□□ 0.37
SHMT2-206ENST00000553529 RAB42Q8N4Z0 105 aa17.38■□□□□ 0.37
SHMT2-206ENST00000553529 TTC29Q8NA56 475 aaPredicted RBP17.38■□□□□ 0.37
SHMT2-206ENST00000553529 CALML6Q8TD86 181 aa17.38■□□□□ 0.37
SHMT2-206ENST00000553529 MAGEC3Q8TD91 643 aa17.38■□□□□ 0.37
SHMT2-206ENST00000553529 MIB2Q96AX9 1013 aa17.38■□□□□ 0.37
SHMT2-206ENST00000553529 C8orf44Q96CB5 159 aa17.38■□□□□ 0.37
SHMT2-206ENST00000553529 CCDC138Q96M89 665 aa17.38■□□□□ 0.37
SHMT2-206ENST00000553529 PRAP1Q96NZ9 151 aa17.38■□□□□ 0.37
SHMT2-206ENST00000553529 OR2A5Q96R48 311 aa17.38■□□□□ 0.37
SHMT2-206ENST00000553529 DHRS4Q9BTZ2 278 aa17.38■□□□□ 0.37
SHMT2-206ENST00000553529 FBXL4Q9UKA2 621 aa17.38■□□□□ 0.37
SHMT2-206ENST00000553529 HS3ST3B1Q9Y662 390 aa17.38■□□□□ 0.37
SHMT2-206ENST00000553529 MYO18BQ8IUG5 2567 aa17.38■□□□□ 0.37
SHMT2-206ENST00000553529 FEZF1A0PJY2 475 aa17.37■□□□□ 0.37
SHMT2-206ENST00000553529 CTAGE15A4D2H0 777 aa17.37■□□□□ 0.37
SHMT2-206ENST00000553529 SAT1P21673 171 aa17.37■□□□□ 0.37
SHMT2-206ENST00000553529 MEF2AQ02078 507 aaPredicted RBP17.37■□□□□ 0.37
SHMT2-206ENST00000553529 PRDX1Q06830 199 aaKnown RBP17.37■□□□□ 0.37
SHMT2-206ENST00000553529 Q0VFX4 171 aa17.37■□□□□ 0.37
SHMT2-206ENST00000553529 PDIA2Q13087 525 aaKnown RBP17.37■□□□□ 0.37
SHMT2-206ENST00000553529 MORF4L2Q15014 288 aa17.37■□□□□ 0.37
SHMT2-206ENST00000553529 STEAP4Q687X5 459 aa17.37■□□□□ 0.37
SHMT2-206ENST00000553529 CTAGE6Q86UF2 777 aa17.37■□□□□ 0.37
SHMT2-206ENST00000553529 CSNK1A1LQ8N752 337 aa17.37■□□□□ 0.37
SHMT2-206ENST00000553529 FBXO36Q8NEA4 188 aa17.37■□□□□ 0.37
SHMT2-206ENST00000553529 SEC14L1Q92503 715 aa17.37■□□□□ 0.37
SHMT2-206ENST00000553529 PYCR2Q96C36 320 aa17.37■□□□□ 0.37
SHMT2-206ENST00000553529 CABS1Q96KC9 395 aa17.37■□□□□ 0.37
SHMT2-206ENST00000553529 FAM114A2Q9NRY5 505 aa17.37■□□□□ 0.37
SHMT2-206ENST00000553529 CDC23Q9UJX2 597 aa17.37■□□□□ 0.37
SHMT2-206ENST00000553529 PCDHGA9Q9Y5G4 932 aaKnown RBP17.37■□□□□ 0.37
SHMT2-206ENST00000553529 ANKRD12Q6UB98 2062 aa17.36■□□□□ 0.37
SHMT2-206ENST00000553529 SPTA1P02549 2419 aa17.36■□□□□ 0.37
SHMT2-206ENST00000553529 A0A0A6YYC8 382 aaPredicted RBP17.36■□□□□ 0.37
SHMT2-206ENST00000553529 OR2W5A6NFC9 320 aa17.36■□□□□ 0.37
SHMT2-206ENST00000553529 EFCAB8A8MWE9 144 aa17.36■□□□□ 0.37
SHMT2-206ENST00000553529 I3L1I5 382 aaPredicted RBP17.36■□□□□ 0.37
SHMT2-206ENST00000553529 RAD51CO43502 376 aa17.36■□□□□ 0.37
SHMT2-206ENST00000553529 FOXS1O43638 330 aa17.36■□□□□ 0.37
SHMT2-206ENST00000553529 SORBS2O94875 1100 aaKnown RBP17.36■□□□□ 0.37
SHMT2-206ENST00000553529 CELA2AP08217 269 aa17.36■□□□□ 0.37
SHMT2-206ENST00000553529 FDXRP22570 491 aa17.36■□□□□ 0.37
SHMT2-206ENST00000553529 ARSFP54793 590 aa17.36■□□□□ 0.37
SHMT2-206ENST00000553529 HIF1AQ16665 826 aa17.36■□□□□ 0.37
SHMT2-206ENST00000553529 TCTE1Q5JU00 501 aa17.36■□□□□ 0.37
SHMT2-206ENST00000553529 THEMIS2Q5TEJ8 643 aa17.36■□□□□ 0.37
SHMT2-206ENST00000553529 FAAH2Q6GMR7 532 aa17.36■□□□□ 0.37
SHMT2-206ENST00000553529 KIRREL2Q6UWL6 708 aa17.36■□□□□ 0.37
SHMT2-206ENST00000553529 VN1R4Q7Z5H5 301 aa17.36■□□□□ 0.37
SHMT2-206ENST00000553529 PCGF5Q86SE9 256 aa17.36■□□□□ 0.37
SHMT2-206ENST00000553529 AMER3Q8N944 861 aa17.36■□□□□ 0.37
SHMT2-206ENST00000553529 FBXO15Q8NCQ5 510 aaPredicted RBP17.36■□□□□ 0.37
SHMT2-206ENST00000553529 COL26A1Q96A83 441 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms