RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 TAC3Q9UHF0 121 aa9.87□□□□□ -0.83
TRAFD1-208ENST00000552890 DCDC2Q9UHG0 476 aa9.87□□□□□ -0.83
TRAFD1-208ENST00000552890 ADGRE2Q9UHX3 823 aa9.87□□□□□ -0.83
TRAFD1-208ENST00000552890 PILRAQ9UKJ1 303 aa9.87□□□□□ -0.83
TRAFD1-208ENST00000552890 PLAGL1Q9UM63 463 aa9.87□□□□□ -0.83
TRAFD1-208ENST00000552890 A0A088AWK7 358 aa9.86□□□□□ -0.83
TRAFD1-208ENST00000552890 SYNDIG1LA6NDD5 238 aa9.86□□□□□ -0.83
TRAFD1-208ENST00000552890 H3BQF6 201 aa9.86□□□□□ -0.83
TRAFD1-208ENST00000552890 PHGDHO43175 533 aaKnown RBP9.86□□□□□ -0.83
TRAFD1-208ENST00000552890 KLK10O43240 276 aa9.86□□□□□ -0.83
TRAFD1-208ENST00000552890 SMIM24O75264 130 aa9.86□□□□□ -0.83
TRAFD1-208ENST00000552890 STK16O75716 305 aa9.86□□□□□ -0.83
TRAFD1-208ENST00000552890 WISP3O95389 354 aaPredicted RBP9.86□□□□□ -0.83
TRAFD1-208ENST00000552890 GUCA1CO95843 209 aa9.86□□□□□ -0.83
TRAFD1-208ENST00000552890 NUDT17P0C025 328 aa9.86□□□□□ -0.83
TRAFD1-208ENST00000552890 RAB40ALP0C0E4 278 aa9.86□□□□□ -0.83
TRAFD1-208ENST00000552890 SLC35G6P0C7Q6 338 aa9.86□□□□□ -0.83
TRAFD1-208ENST00000552890 EBLN1P0CF75 366 aa9.86□□□□□ -0.83
TRAFD1-208ENST00000552890 HGFP14210 728 aa9.86□□□□□ -0.83
TRAFD1-208ENST00000552890 FOLR1P15328 257 aa9.86□□□□□ -0.83
TRAFD1-208ENST00000552890 CD1DP15813 335 aa9.86□□□□□ -0.83
TRAFD1-208ENST00000552890 TFEBP19484 476 aa9.86□□□□□ -0.83
TRAFD1-208ENST00000552890 ZNF10P21506 573 aaPredicted RBP9.86□□□□□ -0.83
TRAFD1-208ENST00000552890 CLDN6P56747 220 aa9.86□□□□□ -0.83
TRAFD1-208ENST00000552890 TBPL1P62380 186 aa9.86□□□□□ -0.83
TRAFD1-208ENST00000552890 PPP1R3AQ16821 1122 aa9.86□□□□□ -0.83
TRAFD1-208ENST00000552890 RHBDD2Q6NTF9 364 aa9.86□□□□□ -0.83
TRAFD1-208ENST00000552890 CCDC81Q6ZN84 652 aa9.86□□□□□ -0.83
TRAFD1-208ENST00000552890 LRRC70Q7Z2Q7 622 aa9.86□□□□□ -0.83
TRAFD1-208ENST00000552890 KLHDC8AQ8IYD2 350 aa9.86□□□□□ -0.83
TRAFD1-208ENST00000552890 MREGQ8N565 214 aa9.86□□□□□ -0.83
TRAFD1-208ENST00000552890 CAMKVQ8NCB2 501 aa9.86□□□□□ -0.83
TRAFD1-208ENST00000552890 PDPRQ8NCN5 879 aa9.86□□□□□ -0.83
TRAFD1-208ENST00000552890 TRPV3Q8NET8 790 aa9.86□□□□□ -0.83
TRAFD1-208ENST00000552890 ABHD11Q8NFV4 315 aa9.86□□□□□ -0.83
TRAFD1-208ENST00000552890 RHBDF1Q96CC6 855 aa9.86□□□□□ -0.83
TRAFD1-208ENST00000552890 CLIP3Q96DZ5 547 aa9.86□□□□□ -0.83
TRAFD1-208ENST00000552890 CNTNAP3BQ96NU0 1288 aa9.86□□□□□ -0.83
TRAFD1-208ENST00000552890 IL17FQ96PD4 163 aa9.86□□□□□ -0.83
TRAFD1-208ENST00000552890 CENPKQ9BS16 269 aa9.86□□□□□ -0.83
TRAFD1-208ENST00000552890 SARGQ9BW04 601 aa9.86□□□□□ -0.83
TRAFD1-208ENST00000552890 CNTNAP3Q9BZ76 1288 aa9.86□□□□□ -0.83
TRAFD1-208ENST00000552890 VPS11Q9H270 941 aa9.86□□□□□ -0.83
TRAFD1-208ENST00000552890 MRPL46Q9H2W6 279 aaKnown RBP9.86□□□□□ -0.83
TRAFD1-208ENST00000552890 ANKZF1Q9H8Y5 726 aa9.86□□□□□ -0.83
TRAFD1-208ENST00000552890 PELI2Q9HAT8 420 aa9.86□□□□□ -0.83
TRAFD1-208ENST00000552890 SLC17A6Q9P2U8 582 aa9.86□□□□□ -0.83
TRAFD1-208ENST00000552890 GPN3Q9UHW5 284 aaPredicted RBP9.86□□□□□ -0.83
TRAFD1-208ENST00000552890 TSR3Q9UJK0 312 aaKnown RBP9.86□□□□□ -0.83
TRAFD1-208ENST00000552890 NXT1Q9UKK6 140 aaKnown RBP9.86□□□□□ -0.83
TRAFD1-208ENST00000552890 RAB21Q9UL25 225 aa9.86□□□□□ -0.83
TRAFD1-208ENST00000552890 ZMIZ1Q9ULJ6 1067 aa9.86□□□□□ -0.83
TRAFD1-208ENST00000552890 RUVBL2Q9Y230 463 aaKnown RBP9.86□□□□□ -0.83
TRAFD1-208ENST00000552890 STK38LQ9Y2H1 464 aa9.86□□□□□ -0.83
TRAFD1-208ENST00000552890 ANGPTL3Q9Y5C1 460 aa9.86□□□□□ -0.83
TRAFD1-208ENST00000552890 EPG5Q9HCE0 2579 aa9.86□□□□□ -0.83
TRAFD1-208ENST00000552890 A0A1W2PPV9 198 aa9.85□□□□□ -0.83
TRAFD1-208ENST00000552890 FITM1A5D6W6 292 aa9.85□□□□□ -0.83
TRAFD1-208ENST00000552890 NPEPPSL1A6NEC2 478 aa9.85□□□□□ -0.83
TRAFD1-208ENST00000552890 ZNF891A8MT65 544 aaPredicted RBP9.85□□□□□ -0.83
TRAFD1-208ENST00000552890 TRIM49D1C9J1S8 452 aa9.85□□□□□ -0.83
TRAFD1-208ENST00000552890 CDC7O00311 574 aa9.85□□□□□ -0.83
TRAFD1-208ENST00000552890 RAD1O60671 282 aa9.85□□□□□ -0.83
TRAFD1-208ENST00000552890 UGDHO60701 494 aa9.85□□□□□ -0.83
TRAFD1-208ENST00000552890 KIAA0754O94854 1291 aa9.85□□□□□ -0.83
TRAFD1-208ENST00000552890 DLGAP3O95886 979 aa9.85□□□□□ -0.83
TRAFD1-208ENST00000552890 ALBP02768 609 aa9.85□□□□□ -0.83
TRAFD1-208ENST00000552890 ALDOAP04075 364 aaKnown RBP9.85□□□□□ -0.83
TRAFD1-208ENST00000552890 CYC1P08574 325 aa9.85□□□□□ -0.83
TRAFD1-208ENST00000552890 MYZAPP0CAP1 466 aa9.85□□□□□ -0.83
TRAFD1-208ENST00000552890 GFAPP14136 432 aa9.85□□□□□ -0.83
TRAFD1-208ENST00000552890 NPPBP16860 134 aa9.85□□□□□ -0.83
TRAFD1-208ENST00000552890 KRT15P19012 456 aa9.85□□□□□ -0.83
TRAFD1-208ENST00000552890 IL10P22301 178 aa9.85□□□□□ -0.83
TRAFD1-208ENST00000552890 AHRP35869 848 aa9.85□□□□□ -0.83
TRAFD1-208ENST00000552890 ETV5P41161 510 aa9.85□□□□□ -0.83
TRAFD1-208ENST00000552890 MAGEA12P43365 314 aa9.85□□□□□ -0.83
TRAFD1-208ENST00000552890 ALDH18A1P54886 795 aaKnown RBP9.85□□□□□ -0.83
TRAFD1-208ENST00000552890 PHEXP78562 749 aa9.85□□□□□ -0.83
TRAFD1-208ENST00000552890 DCDP81605 110 aaKnown RBP9.85□□□□□ -0.83
TRAFD1-208ENST00000552890 RGS1Q08116 209 aa9.85□□□□□ -0.83
TRAFD1-208ENST00000552890 TGM3Q08188 693 aa9.85□□□□□ -0.83
TRAFD1-208ENST00000552890 ASPHQ12797 758 aa9.85□□□□□ -0.83
TRAFD1-208ENST00000552890 PWP1Q13610 501 aa9.85□□□□□ -0.83
TRAFD1-208ENST00000552890 FAM53BQ14153 422 aa9.85□□□□□ -0.83
TRAFD1-208ENST00000552890 PHKG1Q16816 387 aa9.85□□□□□ -0.83
TRAFD1-208ENST00000552890 ZNF425Q6IV72 752 aa9.85□□□□□ -0.83
TRAFD1-208ENST00000552890 PWWP2BQ6NUJ5 590 aa9.85□□□□□ -0.83
TRAFD1-208ENST00000552890 SUSD1Q6UWL2 747 aa9.85□□□□□ -0.83
TRAFD1-208ENST00000552890 CDHR3Q6ZTQ4 885 aa9.85□□□□□ -0.83
TRAFD1-208ENST00000552890 MICALCLQ6ZW33 695 aa9.85□□□□□ -0.83
TRAFD1-208ENST00000552890 RNF44Q7L0R7 432 aa9.85□□□□□ -0.83
TRAFD1-208ENST00000552890 ISCA2Q86U28 154 aa9.85□□□□□ -0.83
TRAFD1-208ENST00000552890 SLC22A9Q8IVM8 553 aa9.85□□□□□ -0.83
TRAFD1-208ENST00000552890 SRFBP1Q8NEF9 429 aaKnown RBP9.85□□□□□ -0.83
TRAFD1-208ENST00000552890 FLVCR1-AS1Q8TAF5 88 aa9.85□□□□□ -0.83
TRAFD1-208ENST00000552890 DCAKDQ8WVC6 231 aa9.85□□□□□ -0.83
TRAFD1-208ENST00000552890 SLC5A11Q8WWX8 675 aa9.85□□□□□ -0.83
TRAFD1-208ENST00000552890 ALKBH8Q96BT7 664 aaKnown RBP9.85□□□□□ -0.83
TRAFD1-208ENST00000552890 REPS1Q96D71 796 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms