RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 MLYCDO95822 493 aa13.49□□□□□ -0.25
CHMP1A-210ENST00000551981 ANXA5P08758 320 aa13.49□□□□□ -0.25
CHMP1A-210ENST00000551981 AGAP20933 346 aa13.49□□□□□ -0.25
CHMP1A-210ENST00000551981 ADRA1DP25100 572 aa13.49□□□□□ -0.25
CHMP1A-210ENST00000551981 MST1P26927 711 aa13.49□□□□□ -0.25
CHMP1A-210ENST00000551981 CMPK1P30085 196 aa13.49□□□□□ -0.25
CHMP1A-210ENST00000551981 SSTR2P30874 369 aa13.49□□□□□ -0.25
CHMP1A-210ENST00000551981 CYLC1P35663 651 aaPredicted RBP13.49□□□□□ -0.25
CHMP1A-210ENST00000551981 ZNF33BQ06732 778 aa13.49□□□□□ -0.25
CHMP1A-210ENST00000551981 FAAH2Q6GMR7 532 aa13.49□□□□□ -0.25
CHMP1A-210ENST00000551981 PTRHD1Q6GMV3 140 aaKnown RBP13.49□□□□□ -0.25
CHMP1A-210ENST00000551981 AADACL2Q6P093 401 aa13.49□□□□□ -0.25
CHMP1A-210ENST00000551981 PPP1R21Q6ZMI0 780 aa13.49□□□□□ -0.25
CHMP1A-210ENST00000551981 KRT222Q8N1A0 295 aa13.49□□□□□ -0.25
CHMP1A-210ENST00000551981 ZNF700Q9H0M5 742 aa13.49□□□□□ -0.25
CHMP1A-210ENST00000551981 MKKSQ9NPJ1 570 aaPredicted RBP13.49□□□□□ -0.25
CHMP1A-210ENST00000551981 STOX2Q9P2F5 926 aaPredicted RBP13.49□□□□□ -0.25
CHMP1A-210ENST00000551981 MTORP42345 2549 aa13.49□□□□□ -0.25
CHMP1A-210ENST00000551981 ITPR3Q14573 2671 aa13.48□□□□□ -0.25
CHMP1A-210ENST00000551981 OR2A25A4D2G3 310 aa13.48□□□□□ -0.25
CHMP1A-210ENST00000551981 PRMT5O14744 637 aaPredicted RBP13.48□□□□□ -0.25
CHMP1A-210ENST00000551981 C1orf105O95561 183 aa13.48□□□□□ -0.25
CHMP1A-210ENST00000551981 ITGAMP11215 1152 aa13.48□□□□□ -0.25
CHMP1A-210ENST00000551981 BDKRB1P46663 353 aa13.48□□□□□ -0.25
CHMP1A-210ENST00000551981 TTPAP49638 278 aa13.48□□□□□ -0.25
CHMP1A-210ENST00000551981 GDF10P55107 478 aa13.48□□□□□ -0.25
CHMP1A-210ENST00000551981 ACVR1Q04771 509 aa13.48□□□□□ -0.25
CHMP1A-210ENST00000551981 PRTGQ2VWP7 1150 aa13.48□□□□□ -0.25
CHMP1A-210ENST00000551981 ZNF534Q76KX8 674 aa13.48□□□□□ -0.25
CHMP1A-210ENST00000551981 OTOAQ7RTW8 1153 aa13.48□□□□□ -0.25
CHMP1A-210ENST00000551981 CSNK1A1LQ8N752 337 aa13.48□□□□□ -0.25
CHMP1A-210ENST00000551981 OR2A1Q8NGT9 310 aa13.48□□□□□ -0.25
CHMP1A-210ENST00000551981 ALG3Q92685 438 aa13.48□□□□□ -0.25
CHMP1A-210ENST00000551981 PEX13Q92968 403 aa13.48□□□□□ -0.25
CHMP1A-210ENST00000551981 MMABQ96EY8 250 aaPredicted RBP13.48□□□□□ -0.25
CHMP1A-210ENST00000551981 MAGED4Q96JG8 741 aa13.48□□□□□ -0.25
CHMP1A-210ENST00000551981 TMEM121Q9BTD3 319 aa13.48□□□□□ -0.25
CHMP1A-210ENST00000551981 DPH7Q9BTV6 452 aa13.48□□□□□ -0.25
CHMP1A-210ENST00000551981 TUBB6Q9BUF5 446 aa13.48□□□□□ -0.25
CHMP1A-210ENST00000551981 TGIF2Q9GZN2 237 aa13.48□□□□□ -0.25
CHMP1A-210ENST00000551981 CATSPERZQ9NTU4 200 aa13.48□□□□□ -0.25
CHMP1A-210ENST00000551981 STMN3Q9NZ72 180 aa13.48□□□□□ -0.25
CHMP1A-210ENST00000551981 SPATA7Q9P0W8 599 aa13.48□□□□□ -0.25
CHMP1A-210ENST00000551981 GNPTGQ9UJJ9 305 aa13.48□□□□□ -0.25
CHMP1A-210ENST00000551981 CACNA1CQ13936 2221 aa13.47□□□□□ -0.25
CHMP1A-210ENST00000551981 LOC102723996A0A087X1L8 192 aa13.47□□□□□ -0.25
CHMP1A-210ENST00000551981 RCCD1A6NED2 376 aa13.47□□□□□ -0.25
CHMP1A-210ENST00000551981 E7EVH7 732 aa13.47□□□□□ -0.25
CHMP1A-210ENST00000551981 H0YGG7 62 aa13.47□□□□□ -0.25
CHMP1A-210ENST00000551981 FFAR3O14843 346 aa13.47□□□□□ -0.25
CHMP1A-210ENST00000551981 GPR42O15529 346 aa13.47□□□□□ -0.25
CHMP1A-210ENST00000551981 NRP2O60462 931 aa13.47□□□□□ -0.25
CHMP1A-210ENST00000551981 IPO7O95373 1038 aaKnown RBP13.47□□□□□ -0.25
CHMP1A-210ENST00000551981 CELA2AP08217 269 aa13.47□□□□□ -0.25
CHMP1A-210ENST00000551981 CAPN3P20807 821 aa13.47□□□□□ -0.25
CHMP1A-210ENST00000551981 SLC26A3P40879 764 aa13.47□□□□□ -0.25
CHMP1A-210ENST00000551981 ARF3P61204 181 aaPredicted RBP13.47□□□□□ -0.25
CHMP1A-210ENST00000551981 TBX2Q13207 712 aaPredicted RBP13.47□□□□□ -0.25
CHMP1A-210ENST00000551981 SEMA3AQ14563 771 aa13.47□□□□□ -0.25
CHMP1A-210ENST00000551981 PCOLCEQ15113 449 aa13.47□□□□□ -0.25
CHMP1A-210ENST00000551981 CCSMST1Q4G0I0 132 aa13.47□□□□□ -0.25
CHMP1A-210ENST00000551981 ZNF766Q5HY98 468 aa13.47□□□□□ -0.25
CHMP1A-210ENST00000551981 GARNL3Q5VVW2 1013 aa13.47□□□□□ -0.25
CHMP1A-210ENST00000551981 NEK10Q6ZWH5 1172 aa13.47□□□□□ -0.25
CHMP1A-210ENST00000551981 LRRC6Q86X45 466 aa13.47□□□□□ -0.25
CHMP1A-210ENST00000551981 PPHLN1Q8NEY8 458 aaKnown RBP13.47□□□□□ -0.25
CHMP1A-210ENST00000551981 METTL21AQ8WXB1 218 aa13.47□□□□□ -0.25
CHMP1A-210ENST00000551981 RERGQ96A58 199 aaPredicted RBP13.47□□□□□ -0.25
CHMP1A-210ENST00000551981 UTP6Q9NYH9 597 aaKnown RBP13.47□□□□□ -0.25
CHMP1A-210ENST00000551981 RUVBL1Q9Y265 456 aaKnown RBP13.47□□□□□ -0.25
CHMP1A-210ENST00000551981 TCAF1Q9Y4C2 921 aa13.47□□□□□ -0.25
CHMP1A-210ENST00000551981 NFS1Q9Y697 457 aa13.47□□□□□ -0.25
CHMP1A-210ENST00000551981 NCOA6Q14686 2063 aaPredicted RBP13.47□□□□□ -0.25
CHMP1A-210ENST00000551981 MED13LQ71F56 2210 aa13.47□□□□□ -0.25
CHMP1A-210ENST00000551981 A0A1W2PPV9 198 aa13.46□□□□□ -0.25
CHMP1A-210ENST00000551981 TXNDC9O14530 226 aa13.46□□□□□ -0.25
CHMP1A-210ENST00000551981 SUN1O94901 812 aa13.46□□□□□ -0.25
CHMP1A-210ENST00000551981 CLDN14O95500 239 aa13.46□□□□□ -0.25
CHMP1A-210ENST00000551981 C8orf89P0DMQ9 161 aa13.46□□□□□ -0.25
CHMP1A-210ENST00000551981 PKMP14618 531 aaKnown RBP13.46□□□□□ -0.25
CHMP1A-210ENST00000551981 RPA3P35244 121 aaPredicted RBP13.46□□□□□ -0.25
CHMP1A-210ENST00000551981 ADORA2A-AS1P86434 159 aa13.46□□□□□ -0.25
CHMP1A-210ENST00000551981 PMP22Q01453 160 aa13.46□□□□□ -0.25
CHMP1A-210ENST00000551981 SRSF11Q05519 484 aaKnown RBP13.46□□□□□ -0.25
CHMP1A-210ENST00000551981 C3AR1Q16581 482 aa13.46□□□□□ -0.25
CHMP1A-210ENST00000551981 FBXO42Q6P3S6 717 aa13.46□□□□□ -0.25
CHMP1A-210ENST00000551981 TMEM205Q6UW68 189 aa13.46□□□□□ -0.25
CHMP1A-210ENST00000551981 LDB1Q86U70 411 aaPredicted RBP13.46□□□□□ -0.25
CHMP1A-210ENST00000551981 ZNF295-AS1Q8N0V1 137 aa13.46□□□□□ -0.25
CHMP1A-210ENST00000551981 UBL4BQ8N7F7 174 aa13.46□□□□□ -0.25
CHMP1A-210ENST00000551981 AMER3Q8N944 861 aa13.46□□□□□ -0.25
CHMP1A-210ENST00000551981 SLC35B2Q8TB61 432 aa13.46□□□□□ -0.25
CHMP1A-210ENST00000551981 MTFMTQ96DP5 389 aaKnown RBP13.46□□□□□ -0.25
CHMP1A-210ENST00000551981 ZNF778Q96MU6 729 aa13.46□□□□□ -0.25
CHMP1A-210ENST00000551981 PLCD4Q9BRC7 762 aa13.46□□□□□ -0.25
CHMP1A-210ENST00000551981 ACAT2Q9BWD1 397 aa13.46□□□□□ -0.25
CHMP1A-210ENST00000551981 DRC3Q9H069 523 aa13.46□□□□□ -0.25
CHMP1A-210ENST00000551981 GPAMQ9HCL2 828 aa13.46□□□□□ -0.25
CHMP1A-210ENST00000551981 MRPS30Q9NP92 439 aaKnown RBP13.46□□□□□ -0.25
CHMP1A-210ENST00000551981 MKL2Q9ULH7 1088 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms