RNA–Protein interactions for RNA: ENST00000549970.5

VPS29-207, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-207ENST00000549970 HSD17B2P37059 387 aa15.59■□□□□ 0.09
VPS29-207ENST00000549970 TAP2Q03519 686 aa15.59■□□□□ 0.09
VPS29-207ENST00000549970 SRSF1Q07955 248 aaKnown RBP eCLIP15.59■□□□□ 0.09
VPS29-207ENST00000549970 DHX9Q08211 1270 aaKnown RBP15.59■□□□□ 0.09
VPS29-207ENST00000549970 CRYMQ14894 314 aa15.59■□□□□ 0.09
VPS29-207ENST00000549970 INPP5JQ15735 1006 aaPredicted RBP15.59■□□□□ 0.09
VPS29-207ENST00000549970 MUM1Q2TAK8 710 aa15.59■□□□□ 0.09
VPS29-207ENST00000549970 ADCK2Q7Z695 626 aa15.59■□□□□ 0.09
VPS29-207ENST00000549970 PAQR7Q86WK9 346 aa15.59■□□□□ 0.09
VPS29-207ENST00000549970 FAM26EQ8N5C1 309 aa15.59■□□□□ 0.09
VPS29-207ENST00000549970 FBXO15Q8NCQ5 510 aaPredicted RBP15.59■□□□□ 0.09
VPS29-207ENST00000549970 ASB11Q8WXH4 323 aa15.59■□□□□ 0.09
VPS29-207ENST00000549970 PNPLA2Q96AD5 504 aa15.59■□□□□ 0.09
VPS29-207ENST00000549970 CABS1Q96KC9 395 aa15.59■□□□□ 0.09
VPS29-207ENST00000549970 C10orf90Q96M02 699 aa15.59■□□□□ 0.09
VPS29-207ENST00000549970 NDNQ99608 321 aa15.59■□□□□ 0.09
VPS29-207ENST00000549970 AARSD1Q9BTE6 412 aaKnown RBP15.59■□□□□ 0.09
VPS29-207ENST00000549970 ZNF552Q9H707 407 aaPredicted RBP15.59■□□□□ 0.09
VPS29-207ENST00000549970 SYNPO2LQ9H987 977 aa15.59■□□□□ 0.09
VPS29-207ENST00000549970 ZNF304Q9HCX3 659 aa15.59■□□□□ 0.09
VPS29-207ENST00000549970 ANKMY1Q9P2S6 941 aa15.59■□□□□ 0.09
VPS29-207ENST00000549970 NXT1Q9UKK6 140 aaKnown RBP15.59■□□□□ 0.09
VPS29-207ENST00000549970 MAP4K5Q9Y4K4 846 aa15.59■□□□□ 0.09
VPS29-207ENST00000549970 HS3ST3B1Q9Y662 390 aa15.59■□□□□ 0.09
VPS29-207ENST00000549970 MDC1Q14676 2089 aaKnown RBP15.59■□□□□ 0.09
VPS29-207ENST00000549970 SHANK1Q9Y566 2161 aa15.59■□□□□ 0.09
VPS29-207ENST00000549970 CLEC18AA5D8T8 446 aa15.58■□□□□ 0.08
VPS29-207ENST00000549970 CYSRT1A8MQ03 144 aa15.58■□□□□ 0.08
VPS29-207ENST00000549970 GFYI3L273 518 aa15.58■□□□□ 0.08
VPS29-207ENST00000549970 SOCS6O14544 535 aa15.58■□□□□ 0.08
VPS29-207ENST00000549970 PRDX1Q06830 199 aaKnown RBP15.58■□□□□ 0.08
VPS29-207ENST00000549970 AIMP2Q13155 320 aaKnown RBP15.58■□□□□ 0.08
VPS29-207ENST00000549970 PTK6Q13882 451 aa15.58■□□□□ 0.08
VPS29-207ENST00000549970 RBBP7Q16576 425 aa15.58■□□□□ 0.08
VPS29-207ENST00000549970 THEMIS2Q5TEJ8 643 aa15.58■□□□□ 0.08
VPS29-207ENST00000549970 CLEC18BQ6UXF7 455 aa15.58■□□□□ 0.08
VPS29-207ENST00000549970 CYHR1Q6ZMK1 362 aa15.58■□□□□ 0.08
VPS29-207ENST00000549970 UBE2R2Q712K3 238 aaPredicted RBP15.58■□□□□ 0.08
VPS29-207ENST00000549970 PRSS58Q8IYP2 241 aa15.58■□□□□ 0.08
VPS29-207ENST00000549970 CSNK1A1LQ8N752 337 aa15.58■□□□□ 0.08
VPS29-207ENST00000549970 CLEC18CQ8NCF0 446 aa15.58■□□□□ 0.08
VPS29-207ENST00000549970 C2CD4AQ8NCU7 369 aaPredicted RBP15.58■□□□□ 0.08
VPS29-207ENST00000549970 GALNT11Q8NCW6 608 aa15.58■□□□□ 0.08
VPS29-207ENST00000549970 NACC2Q96BF6 587 aa15.58■□□□□ 0.08
VPS29-207ENST00000549970 CAPZA3Q96KX2 299 aa15.58■□□□□ 0.08
VPS29-207ENST00000549970 CRB3Q9BUF7 120 aa15.58■□□□□ 0.08
VPS29-207ENST00000549970 PCYOX1Q9UHG3 505 aa15.58■□□□□ 0.08
VPS29-207ENST00000549970 TRMT6Q9UJA5 497 aaKnown RBP15.58■□□□□ 0.08
VPS29-207ENST00000549970 PRRC2CQ9Y520 2896 aaKnown RBP15.58■□□□□ 0.08
VPS29-207ENST00000549970 LRRK2Q5S007 2527 aa15.57■□□□□ 0.08
VPS29-207ENST00000549970 VSTM2BA6NLU5 285 aa15.57■□□□□ 0.08
VPS29-207ENST00000549970 USP27XA6NNY8 438 aa15.57■□□□□ 0.08
VPS29-207ENST00000549970 KLHL41O60662 606 aa15.57■□□□□ 0.08
VPS29-207ENST00000549970 TCP1P17987 556 aaKnown RBP15.57■□□□□ 0.08
VPS29-207ENST00000549970 FBLP22087 321 aaKnown RBP15.57■□□□□ 0.08
VPS29-207ENST00000549970 IMPA1P29218 277 aa15.57■□□□□ 0.08
VPS29-207ENST00000549970 OCA2Q04671 838 aa15.57■□□□□ 0.08
VPS29-207ENST00000549970 HKDC1Q2TB90 917 aa15.57■□□□□ 0.08
VPS29-207ENST00000549970 PRTGQ2VWP7 1150 aa15.57■□□□□ 0.08
VPS29-207ENST00000549970 BBS9Q3SYG4 887 aa15.57■□□□□ 0.08
VPS29-207ENST00000549970 MSS51Q4VC12 460 aa15.57■□□□□ 0.08
VPS29-207ENST00000549970 PRAMEF13Q5VWM6 474 aa15.57■□□□□ 0.08
VPS29-207ENST00000549970 ZNF425Q6IV72 752 aa15.57■□□□□ 0.08
VPS29-207ENST00000549970 PRMT9Q6P2P2 845 aa15.57■□□□□ 0.08
VPS29-207ENST00000549970 KIRREL2Q6UWL6 708 aa15.57■□□□□ 0.08
VPS29-207ENST00000549970 PCGF5Q86SE9 256 aa15.57■□□□□ 0.08
VPS29-207ENST00000549970 PLD3Q8IV08 490 aa15.57■□□□□ 0.08
VPS29-207ENST00000549970 STT3BQ8TCJ2 826 aa15.57■□□□□ 0.08
VPS29-207ENST00000549970 RERGQ96A58 199 aaPredicted RBP15.57■□□□□ 0.08
VPS29-207ENST00000549970 MIEF2Q96C03 454 aa15.57■□□□□ 0.08
VPS29-207ENST00000549970 EBNA1BP2Q99848 306 aaKnown RBP15.57■□□□□ 0.08
VPS29-207ENST00000549970 ZBTB20Q9HC78 741 aaPredicted RBP15.57■□□□□ 0.08
VPS29-207ENST00000549970 SEMA3GQ9NS98 782 aa15.57■□□□□ 0.08
VPS29-207ENST00000549970 UTP6Q9NYH9 597 aaKnown RBP15.57■□□□□ 0.08
VPS29-207ENST00000549970 ZNF282Q9UDV7 671 aaPredicted RBP15.57■□□□□ 0.08
VPS29-207ENST00000549970 RUVBL1Q9Y265 456 aaKnown RBP15.57■□□□□ 0.08
VPS29-207ENST00000549970 DOCK10Q96BY6 2186 aa15.57■□□□□ 0.08
VPS29-207ENST00000549970 FFAR3O14843 346 aa15.56■□□□□ 0.08
VPS29-207ENST00000549970 HAT1O14929 419 aa15.56■□□□□ 0.08
VPS29-207ENST00000549970 GPR42O15529 346 aa15.56■□□□□ 0.08
VPS29-207ENST00000549970 IPO13O94829 963 aaKnown RBP15.56■□□□□ 0.08
VPS29-207ENST00000549970 TTC4O95801 387 aa15.56■□□□□ 0.08
VPS29-207ENST00000549970 ZGLP1P0C6A0 271 aa15.56■□□□□ 0.08
VPS29-207ENST00000549970 EZRP15311 586 aaKnown RBP15.56■□□□□ 0.08
VPS29-207ENST00000549970 SKIV2L2P42285 1042 aaKnown RBP15.56■□□□□ 0.08
VPS29-207ENST00000549970 SOX8P57073 446 aa15.56■□□□□ 0.08
VPS29-207ENST00000549970 ABATP80404 500 aa15.56■□□□□ 0.08
VPS29-207ENST00000549970 KLC1Q07866 573 aa15.56■□□□□ 0.08
VPS29-207ENST00000549970 TUBB8Q3ZCM7 444 aa15.56■□□□□ 0.08
VPS29-207ENST00000549970 PLEKHN1Q494U1 663 aaPredicted RBP15.56■□□□□ 0.08
VPS29-207ENST00000549970 VWA2Q5GFL6 755 aa15.56■□□□□ 0.08
VPS29-207ENST00000549970 SPANXN3Q5MJ09 141 aa15.56■□□□□ 0.08
VPS29-207ENST00000549970 HP1BP3Q5SSJ5 553 aaPredicted RBP15.56■□□□□ 0.08
VPS29-207ENST00000549970 UGT3A1Q6NUS8 523 aa15.56■□□□□ 0.08
VPS29-207ENST00000549970 IGDCC3Q8IVU1 814 aa15.56■□□□□ 0.08
VPS29-207ENST00000549970 KLHL7Q8IXQ5 586 aa15.56■□□□□ 0.08
VPS29-207ENST00000549970 PARP9Q8IXQ6 854 aa15.56■□□□□ 0.08
VPS29-207ENST00000549970 LRRC56Q8IYG6 542 aaPredicted RBP15.56■□□□□ 0.08
VPS29-207ENST00000549970 GABPB2Q8TAK5 448 aaPredicted RBP15.56■□□□□ 0.08
VPS29-207ENST00000549970 TM9SF4Q92544 642 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms