RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 TRIOO75962 3097 aa13.25□□□□□ -0.29
PRPF40B-209ENST00000548825 LINC00854A0A1B0GVQ3 168 aa13.25□□□□□ -0.29
PRPF40B-209ENST00000548825 H0YJX3 145 aa13.25□□□□□ -0.29
PRPF40B-209ENST00000548825 MYO1DO94832 1006 aa13.25□□□□□ -0.29
PRPF40B-209ENST00000548825 OCM2P0CE71 109 aa13.25□□□□□ -0.29
PRPF40B-209ENST00000548825 OCMP0CE72 109 aaPredicted RBP13.25□□□□□ -0.29
PRPF40B-209ENST00000548825 MASP1P48740 699 aa13.25□□□□□ -0.29
PRPF40B-209ENST00000548825 HLCSP50747 726 aa13.25□□□□□ -0.29
PRPF40B-209ENST00000548825 RPS26P62854 115 aaKnown RBP13.25□□□□□ -0.29
PRPF40B-209ENST00000548825 VLDLRP98155 873 aa13.25□□□□□ -0.29
PRPF40B-209ENST00000548825 NFATC3Q12968 1075 aa13.25□□□□□ -0.29
PRPF40B-209ENST00000548825 DOC2AQ14183 400 aa13.25□□□□□ -0.29
PRPF40B-209ENST00000548825 SPCS2Q15005 226 aa13.25□□□□□ -0.29
PRPF40B-209ENST00000548825 CATSPEREQ5SY80 951 aa13.25□□□□□ -0.29
PRPF40B-209ENST00000548825 ZNF773Q6PK81 442 aa13.25□□□□□ -0.29
PRPF40B-209ENST00000548825 ADCK1Q86TW2 530 aa13.25□□□□□ -0.29
PRPF40B-209ENST00000548825 P3H2Q8IVL5 708 aa13.25□□□□□ -0.29
PRPF40B-209ENST00000548825 SPARTQ8N0X7 666 aa13.25□□□□□ -0.29
PRPF40B-209ENST00000548825 KREMEN2Q8NCW0 462 aa13.25□□□□□ -0.29
PRPF40B-209ENST00000548825 HSH2DQ96JZ2 352 aa13.25□□□□□ -0.29
PRPF40B-209ENST00000548825 RAD21L1Q9H4I0 556 aa13.25□□□□□ -0.29
PRPF40B-209ENST00000548825 KRT84Q9NSB2 600 aa13.25□□□□□ -0.29
PRPF40B-209ENST00000548825 SELENONQ9NZV5 590 aa13.25□□□□□ -0.29
PRPF40B-209ENST00000548825 BLOC1S6Q9UL45 172 aa13.25□□□□□ -0.29
PRPF40B-209ENST00000548825 CORINQ9Y5Q5 1042 aa13.25□□□□□ -0.29
PRPF40B-209ENST00000548825 SCN5AQ14524 2016 aa13.25□□□□□ -0.29
PRPF40B-209ENST00000548825 WASH3PC4AMC7 463 aa13.25□□□□□ -0.29
PRPF40B-209ENST00000548825 RECQL5O94762 991 aaPredicted RBP13.25□□□□□ -0.29
PRPF40B-209ENST00000548825 ABLIM3O94929 683 aa13.25□□□□□ -0.29
PRPF40B-209ENST00000548825 C1SP09871 688 aa13.25□□□□□ -0.29
PRPF40B-209ENST00000548825 RUNDC3AQ59EK9 446 aa13.25□□□□□ -0.29
PRPF40B-209ENST00000548825 COQ5Q5HYK3 327 aa13.25□□□□□ -0.29
PRPF40B-209ENST00000548825 SLCO6A1Q86UG4 719 aa13.25□□□□□ -0.29
PRPF40B-209ENST00000548825 CACTIN-AS1Q8N1I8 211 aa13.25□□□□□ -0.29
PRPF40B-209ENST00000548825 DPP10Q8N608 796 aa13.25□□□□□ -0.29
PRPF40B-209ENST00000548825 CHDHQ8NE62 594 aaPredicted RBP13.25□□□□□ -0.29
PRPF40B-209ENST00000548825 OR8J3Q8NGG0 315 aa13.25□□□□□ -0.29
PRPF40B-209ENST00000548825 STON2Q8WXE9 905 aa13.25□□□□□ -0.29
PRPF40B-209ENST00000548825 NELL1Q92832 810 aa13.25□□□□□ -0.29
PRPF40B-209ENST00000548825 RPL3LQ92901 407 aaKnown RBP13.25□□□□□ -0.29
PRPF40B-209ENST00000548825 AP2M1Q96CW1 435 aa13.25□□□□□ -0.29
PRPF40B-209ENST00000548825 PYURFQ96I23 114 aa13.25□□□□□ -0.29
PRPF40B-209ENST00000548825 CLMPQ9H6B4 373 aa13.25□□□□□ -0.29
PRPF40B-209ENST00000548825 IL21Q9HBE4 155 aa13.25□□□□□ -0.29
PRPF40B-209ENST00000548825 CTPS2Q9NRF8 586 aa13.25□□□□□ -0.29
PRPF40B-209ENST00000548825 PHF24Q9UPV7 400 aa13.25□□□□□ -0.29
PRPF40B-209ENST00000548825 SYNDIG1LA6NDD5 238 aa13.24□□□□□ -0.29
PRPF40B-209ENST00000548825 H7C0S8 307 aa13.24□□□□□ -0.29
PRPF40B-209ENST00000548825 ELFN1P0C7U0 828 aa13.24□□□□□ -0.29
PRPF40B-209ENST00000548825 PABPC1P11940 636 aaKnown RBP13.24□□□□□ -0.29
PRPF40B-209ENST00000548825 CRHBPP24387 322 aa13.24□□□□□ -0.29
PRPF40B-209ENST00000548825 SPINT3P49223 89 aa13.24□□□□□ -0.29
PRPF40B-209ENST00000548825 ADARB1P78563 741 aaKnown RBP13.24□□□□□ -0.29
PRPF40B-209ENST00000548825 MYBPC3Q14896 1274 aa13.24□□□□□ -0.29
PRPF40B-209ENST00000548825 ACBD5Q5T8D3 534 aaPredicted RBP13.24□□□□□ -0.29
PRPF40B-209ENST00000548825 DUS1LQ6P1R4 473 aaKnown RBP13.24□□□□□ -0.29
PRPF40B-209ENST00000548825 SPRED2Q7Z698 418 aa13.24□□□□□ -0.29
PRPF40B-209ENST00000548825 THOC6Q86W42 341 aaKnown RBP13.24□□□□□ -0.29
PRPF40B-209ENST00000548825 RIMKLAQ8IXN7 391 aa13.24□□□□□ -0.29
PRPF40B-209ENST00000548825 TSPEARQ8WU66 669 aa13.24□□□□□ -0.29
PRPF40B-209ENST00000548825 GTPBP3Q969Y2 492 aaKnown RBP13.24□□□□□ -0.29
PRPF40B-209ENST00000548825 OR2AG1Q9H205 316 aa13.24□□□□□ -0.29
PRPF40B-209ENST00000548825 REEP1Q9H902 201 aa13.24□□□□□ -0.29
PRPF40B-209ENST00000548825 PADI4Q9UM07 663 aa13.24□□□□□ -0.29
PRPF40B-209ENST00000548825 BACE2Q9Y5Z0 518 aa13.24□□□□□ -0.29
PRPF40B-209ENST00000548825 HIDE1A8MVS5 230 aa13.24□□□□□ -0.29
PRPF40B-209ENST00000548825 TPST2O60704 377 aa13.24□□□□□ -0.29
PRPF40B-209ENST00000548825 FGF18O76093 207 aa13.24□□□□□ -0.29
PRPF40B-209ENST00000548825 ETHE1O95571 254 aa13.24□□□□□ -0.29
PRPF40B-209ENST00000548825 EPORP19235 508 aa13.24□□□□□ -0.29
PRPF40B-209ENST00000548825 POLR2EP19388 210 aaKnown RBP13.24□□□□□ -0.29
PRPF40B-209ENST00000548825 AOAHP28039 575 aa13.24□□□□□ -0.29
PRPF40B-209ENST00000548825 RPS13P62277 151 aaKnown RBP13.24□□□□□ -0.29
PRPF40B-209ENST00000548825 DMC1Q14565 340 aa13.24□□□□□ -0.29
PRPF40B-209ENST00000548825 GDPD4Q6W3E5 623 aa13.24□□□□□ -0.29
PRPF40B-209ENST00000548825 CYP4Z1Q86W10 505 aa13.24□□□□□ -0.29
PRPF40B-209ENST00000548825 TTC29Q8NA56 475 aaPredicted RBP13.24□□□□□ -0.29
PRPF40B-209ENST00000548825 ZNF740Q8NDX6 193 aa13.24□□□□□ -0.29
PRPF40B-209ENST00000548825 DUS3LQ96G46 650 aaKnown RBP13.24□□□□□ -0.29
PRPF40B-209ENST00000548825 TCF25Q9BQ70 676 aa13.24□□□□□ -0.29
PRPF40B-209ENST00000548825 CERS4Q9HA82 394 aa13.24□□□□□ -0.29
PRPF40B-209ENST00000548825 TPT1P8Q9HAU6 139 aa13.24□□□□□ -0.29
PRPF40B-209ENST00000548825 THG1LQ9NWX6 298 aaKnown RBP13.24□□□□□ -0.29
PRPF40B-209ENST00000548825 VPS29Q9UBQ0 182 aa13.24□□□□□ -0.29
PRPF40B-209ENST00000548825 FBXO10Q9UK96 956 aa13.24□□□□□ -0.29
PRPF40B-209ENST00000548825 FZD4Q9ULV1 537 aa13.24□□□□□ -0.29
PRPF40B-209ENST00000548825 H0Y858 1186 aa13.24□□□□□ -0.29
PRPF40B-209ENST00000548825 SLC1A7O00341 560 aa13.24□□□□□ -0.29
PRPF40B-209ENST00000548825 RTCAO00442 366 aaKnown RBP13.24□□□□□ -0.29
PRPF40B-209ENST00000548825 ZNF821O75541 412 aaPredicted RBP13.24□□□□□ -0.29
PRPF40B-209ENST00000548825 NADKO95544 446 aaPredicted RBP13.24□□□□□ -0.29
PRPF40B-209ENST00000548825 POP4O95707 220 aaKnown RBP13.24□□□□□ -0.29
PRPF40B-209ENST00000548825 CLK1P49759 484 aaKnown RBP13.24□□□□□ -0.29
PRPF40B-209ENST00000548825 NCS1P62166 190 aa13.24□□□□□ -0.29
PRPF40B-209ENST00000548825 NPTX1Q15818 432 aa13.24□□□□□ -0.29
PRPF40B-209ENST00000548825 C5orf22Q49AR2 442 aa13.24□□□□□ -0.29
PRPF40B-209ENST00000548825 GPR33Q49SQ1 333 aa13.24□□□□□ -0.29
PRPF40B-209ENST00000548825 TPGS2Q68CL5 300 aa13.24□□□□□ -0.29
PRPF40B-209ENST00000548825 AGTRAPQ6RW13 159 aa13.24□□□□□ -0.29
PRPF40B-209ENST00000548825 PRR23BQ6ZRT6 265 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms