RNA–Protein interactions for RNA: ENST00000543794.5

LPCAT3-211, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 2

Gene LPCAT3, Length 1,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-211ENST00000543794 ITGAMP11215 1152 aa18.96■□□□□ 0.63
LPCAT3-211ENST00000543794 BDKRB1P46663 353 aa18.96■□□□□ 0.63
LPCAT3-211ENST00000543794 NAP1L1P55209 391 aaKnown RBP18.96■□□□□ 0.63
LPCAT3-211ENST00000543794 ARF3P61204 181 aaPredicted RBP18.96■□□□□ 0.63
LPCAT3-211ENST00000543794 AP2B1P63010 937 aa18.96■□□□□ 0.63
LPCAT3-211ENST00000543794 YBX1P67809 324 aaKnown RBP18.96■□□□□ 0.63
LPCAT3-211ENST00000543794 PRAMEP78395 509 aa18.96■□□□□ 0.63
LPCAT3-211ENST00000543794 RBPJQ06330 500 aa18.96■□□□□ 0.63
LPCAT3-211ENST00000543794 PCOLCEQ15113 449 aa18.96■□□□□ 0.63
LPCAT3-211ENST00000543794 AARS2Q5JTZ9 985 aaKnown RBP18.96■□□□□ 0.63
LPCAT3-211ENST00000543794 HIBCHQ6NVY1 386 aaPredicted RBP18.96■□□□□ 0.63
LPCAT3-211ENST00000543794 SUN3Q8TAQ9 357 aa18.96■□□□□ 0.63
LPCAT3-211ENST00000543794 GSDMBQ8TAX9 411 aa18.96■□□□□ 0.63
LPCAT3-211ENST00000543794 CABS1Q96KC9 395 aa18.96■□□□□ 0.63
LPCAT3-211ENST00000543794 PANX3Q96QZ0 392 aa18.96■□□□□ 0.63
LPCAT3-211ENST00000543794 DPH7Q9BTV6 452 aa18.96■□□□□ 0.63
LPCAT3-211ENST00000543794 YIPF2Q9BWQ6 316 aa18.96■□□□□ 0.63
LPCAT3-211ENST00000543794 ETNK1Q9HBU6 452 aa18.96■□□□□ 0.63
LPCAT3-211ENST00000543794 C14orf105Q9NVL8 296 aa18.96■□□□□ 0.63
LPCAT3-211ENST00000543794 STMN3Q9NZ72 180 aa18.96■□□□□ 0.63
LPCAT3-211ENST00000543794 ANAPC5Q9UJX4 755 aa18.96■□□□□ 0.63
LPCAT3-211ENST00000543794 R3HDM2Q9Y2K5 976 aaKnown RBP18.96■□□□□ 0.63
LPCAT3-211ENST00000543794 HIVEP1P15822 2718 aa18.96■□□□□ 0.63
LPCAT3-211ENST00000543794 TACC2O95359 2948 aa18.96■□□□□ 0.63
LPCAT3-211ENST00000543794 PCNX1Q96RV3 2341 aa18.95■□□□□ 0.62
LPCAT3-211ENST00000543794 KRT87PA6NCN2 255 aa18.95■□□□□ 0.62
LPCAT3-211ENST00000543794 FFAR3O14843 346 aa18.95■□□□□ 0.62
LPCAT3-211ENST00000543794 KPNA5O15131 536 aa18.95■□□□□ 0.62
LPCAT3-211ENST00000543794 GPR42O15529 346 aa18.95■□□□□ 0.62
LPCAT3-211ENST00000543794 WISP2O76076 250 aa18.95■□□□□ 0.62
LPCAT3-211ENST00000543794 PTMAP06454 111 aaKnown RBP18.95■□□□□ 0.62
LPCAT3-211ENST00000543794 UQCRHP07919 91 aa18.95■□□□□ 0.62
LPCAT3-211ENST00000543794 AGAP20933 346 aa18.95■□□□□ 0.62
LPCAT3-211ENST00000543794 CYLC1P35663 651 aaPredicted RBP18.95■□□□□ 0.62
LPCAT3-211ENST00000543794 CCNFP41002 786 aa18.95■□□□□ 0.62
LPCAT3-211ENST00000543794 GRIA1P42261 906 aa18.95■□□□□ 0.62
LPCAT3-211ENST00000543794 NAA25Q14CX7 972 aa18.95■□□□□ 0.62
LPCAT3-211ENST00000543794 ABHD17BQ5VST6 288 aa18.95■□□□□ 0.62
LPCAT3-211ENST00000543794 FAAH2Q6GMR7 532 aa18.95■□□□□ 0.62
LPCAT3-211ENST00000543794 PTRHD1Q6GMV3 140 aaKnown RBP18.95■□□□□ 0.62
LPCAT3-211ENST00000543794 TMEM205Q6UW68 189 aa18.95■□□□□ 0.62
LPCAT3-211ENST00000543794 AMER3Q8N944 861 aa18.95■□□□□ 0.62
LPCAT3-211ENST00000543794 LRRC57Q8N9N7 239 aa18.95■□□□□ 0.62
LPCAT3-211ENST00000543794 MAGEC3Q8TD91 643 aa18.95■□□□□ 0.62
LPCAT3-211ENST00000543794 IMMP1LQ96LU5 166 aa18.95■□□□□ 0.62
LPCAT3-211ENST00000543794 P2RY12Q9H244 342 aa18.95■□□□□ 0.62
LPCAT3-211ENST00000543794 MKKSQ9NPJ1 570 aaPredicted RBP18.95■□□□□ 0.62
LPCAT3-211ENST00000543794 MARCH4Q9P2E8 410 aaPredicted RBP18.95■□□□□ 0.62
LPCAT3-211ENST00000543794 SH3BGRL2Q9UJC5 107 aa18.95■□□□□ 0.62
LPCAT3-211ENST00000543794 RUVBL1Q9Y265 456 aaKnown RBP18.95■□□□□ 0.62
LPCAT3-211ENST00000543794 TCAF1Q9Y4C2 921 aa18.95■□□□□ 0.62
LPCAT3-211ENST00000543794 BTNL10A8MVZ5 291 aa18.94■□□□□ 0.62
LPCAT3-211ENST00000543794 CMPK1P30085 196 aa18.94■□□□□ 0.62
LPCAT3-211ENST00000543794 STIP1P31948 543 aaKnown RBP18.94■□□□□ 0.62
LPCAT3-211ENST00000543794 TTPAP49638 278 aa18.94■□□□□ 0.62
LPCAT3-211ENST00000543794 CASP6P55212 293 aa18.94■□□□□ 0.62
LPCAT3-211ENST00000543794 ADORA2A-AS1P86434 159 aa18.94■□□□□ 0.62
LPCAT3-211ENST00000543794 FASTKQ14296 549 aaKnown RBP18.94■□□□□ 0.62
LPCAT3-211ENST00000543794 PPP1R21Q6ZMI0 780 aa18.94■□□□□ 0.62
LPCAT3-211ENST00000543794 AMER2Q8N7J2 671 aa18.94■□□□□ 0.62
LPCAT3-211ENST00000543794 SKA2Q8WVK7 121 aaPredicted RBP18.94■□□□□ 0.62
LPCAT3-211ENST00000543794 FOPNLQ96NB1 174 aa18.94■□□□□ 0.62
LPCAT3-211ENST00000543794 PLCD4Q9BRC7 762 aa18.94■□□□□ 0.62
LPCAT3-211ENST00000543794 SYNPO2LQ9H987 977 aa18.94■□□□□ 0.62
LPCAT3-211ENST00000543794 CATSPERZQ9NTU4 200 aa18.94■□□□□ 0.62
LPCAT3-211ENST00000543794 SPATA7Q9P0W8 599 aa18.94■□□□□ 0.62
LPCAT3-211ENST00000543794 ITGB1BP2Q9UKP3 347 aa18.94■□□□□ 0.62
LPCAT3-211ENST00000543794 RUVBL2Q9Y230 463 aaKnown RBP18.94■□□□□ 0.62
LPCAT3-211ENST00000543794 EPN1Q9Y6I3 576 aaPredicted RBP18.94■□□□□ 0.62
LPCAT3-211ENST00000543794 GRID2IPA4D2P6 1211 aa18.93■□□□□ 0.62
LPCAT3-211ENST00000543794 SLC19A2O60779 497 aa18.93■□□□□ 0.62
LPCAT3-211ENST00000543794 PHF2O75151 1096 aa18.93■□□□□ 0.62
LPCAT3-211ENST00000543794 KRT38O76015 456 aa18.93■□□□□ 0.62
LPCAT3-211ENST00000543794 C3AR1Q16581 482 aa18.93■□□□□ 0.62
LPCAT3-211ENST00000543794 GARNL3Q5VVW2 1013 aa18.93■□□□□ 0.62
LPCAT3-211ENST00000543794 LRRC8BQ6P9F7 803 aa18.93■□□□□ 0.62
LPCAT3-211ENST00000543794 OTOAQ7RTW8 1153 aa18.93■□□□□ 0.62
LPCAT3-211ENST00000543794 ARHGEF39Q8N4T4 335 aa18.93■□□□□ 0.62
LPCAT3-211ENST00000543794 CSNK1A1LQ8N752 337 aa18.93■□□□□ 0.62
LPCAT3-211ENST00000543794 ADAMTS18Q8TE60 1221 aa18.93■□□□□ 0.62
LPCAT3-211ENST00000543794 MMABQ96EY8 250 aaPredicted RBP18.93■□□□□ 0.62
LPCAT3-211ENST00000543794 TUBB6Q9BUF5 446 aa18.93■□□□□ 0.62
LPCAT3-211ENST00000543794 ACAT2Q9BWD1 397 aa18.93■□□□□ 0.62
LPCAT3-211ENST00000543794 GNPTGQ9UJJ9 305 aa18.93■□□□□ 0.62
LPCAT3-211ENST00000543794 TCRBV7S2A1N4TA0A589 114 aa18.92■□□□□ 0.62
LPCAT3-211ENST00000543794 CD3EAPO15446 510 aaKnown RBP18.92■□□□□ 0.62
LPCAT3-211ENST00000543794 FOXS1O43638 330 aa18.92■□□□□ 0.62
LPCAT3-211ENST00000543794 VPS26AO75436 327 aa18.92■□□□□ 0.62
LPCAT3-211ENST00000543794 ANXA5P08758 320 aa18.92■□□□□ 0.62
LPCAT3-211ENST00000543794 ERGP11308 486 aa18.92■□□□□ 0.62
LPCAT3-211ENST00000543794 RPS3P23396 243 aaKnown RBP eCLIP18.92■□□□□ 0.626e-7■■■■■ 38.1
LPCAT3-211ENST00000543794 SSTR2P30874 369 aa18.92■□□□□ 0.62
LPCAT3-211ENST00000543794 FDFT1P37268 417 aa18.92■□□□□ 0.62
LPCAT3-211ENST00000543794 SMSP52788 366 aa18.92■□□□□ 0.62
LPCAT3-211ENST00000543794 EFNA3P52797 238 aa18.92■□□□□ 0.62
LPCAT3-211ENST00000543794 PMP22Q01453 160 aa18.92■□□□□ 0.62
LPCAT3-211ENST00000543794 LONRF1Q17RB8 773 aa18.92■□□□□ 0.62
LPCAT3-211ENST00000543794 HKDC1Q2TB90 917 aa18.92■□□□□ 0.62
LPCAT3-211ENST00000543794 PAQR7Q86WK9 346 aa18.92■□□□□ 0.62
LPCAT3-211ENST00000543794 LRRC6Q86X45 466 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms