RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 PGBD2Q6P3X8 592 aa18.87■□□□□ 0.61
SUDS3-204ENST00000543473 PEG10Q86TG7 708 aaKnown RBP18.87■□□□□ 0.61
SUDS3-204ENST00000543473 C2orf73Q8N5S3 287 aaPredicted RBP18.87■□□□□ 0.61
SUDS3-204ENST00000543473 LAG3P18627 525 aa18.87■□□□□ 0.61
SUDS3-204ENST00000543473 LEPRP48357 1165 aaKnown RBP18.87■□□□□ 0.61
SUDS3-204ENST00000543473 DGKEP52429 567 aa18.87■□□□□ 0.61
SUDS3-204ENST00000543473 GK3PQ14409 553 aa18.87■□□□□ 0.61
SUDS3-204ENST00000543473 CLCA4Q14CN2 919 aa18.87■□□□□ 0.61
SUDS3-204ENST00000543473 ADNP2Q6IQ32 1131 aa18.87■□□□□ 0.61
SUDS3-204ENST00000543473 ZNF675Q8TD23 568 aa18.87■□□□□ 0.61
SUDS3-204ENST00000543473 GEMIN6Q8WXD5 167 aaKnown RBP18.87■□□□□ 0.61
SUDS3-204ENST00000543473 SYNDIG1Q9H7V2 258 aa18.87■□□□□ 0.61
SUDS3-204ENST00000543473 A0A1W2PQ67 120 aa18.86■□□□□ 0.61
SUDS3-204ENST00000543473 KRBA1A5PL33 1030 aa18.86■□□□□ 0.61
SUDS3-204ENST00000543473 MAPK9P45984 424 aa18.86■□□□□ 0.61
SUDS3-204ENST00000543473 FRG2Q64ET8 278 aa18.86■□□□□ 0.61
SUDS3-204ENST00000543473 GJD3Q8N144 294 aa18.86■□□□□ 0.61
SUDS3-204ENST00000543473 FRG2BQ96QU4 278 aa18.86■□□□□ 0.61
SUDS3-204ENST00000543473 SLC32A1Q9H598 525 aa18.86■□□□□ 0.61
SUDS3-204ENST00000543473 NSUN3Q9H649 340 aaKnown RBP18.86■□□□□ 0.61
SUDS3-204ENST00000543473 TPT1P8Q9HAU6 139 aa18.86■□□□□ 0.61
SUDS3-204ENST00000543473 TBC1D3BA6NDS4 549 aa18.86■□□□□ 0.61
SUDS3-204ENST00000543473 FAM72CH0Y354 149 aa18.86■□□□□ 0.61
SUDS3-204ENST00000543473 HIST1H2ABP04908 130 aa18.86■□□□□ 0.61
SUDS3-204ENST00000543473 ACSL1P33121 698 aa18.86■□□□□ 0.61
SUDS3-204ENST00000543473 GABARAPL2P60520 117 aa18.86■□□□□ 0.61
SUDS3-204ENST00000543473 RAPSNQ13702 412 aa18.86■□□□□ 0.61
SUDS3-204ENST00000543473 FAM72AQ5TYM5 149 aa18.86■□□□□ 0.61
SUDS3-204ENST00000543473 GDF6Q6KF10 455 aaPredicted RBP18.86■□□□□ 0.61
SUDS3-204ENST00000543473 FAM72DQ6L9T8 149 aa18.86■□□□□ 0.61
SUDS3-204ENST00000543473 FBXL22Q6P050 247 aa18.86■□□□□ 0.61
SUDS3-204ENST00000543473 BEND5Q7L4P6 421 aa18.86■□□□□ 0.61
SUDS3-204ENST00000543473 HIST3H2AQ7L7L0 130 aa18.86■□□□□ 0.61
SUDS3-204ENST00000543473 FAM72BQ86X60 149 aa18.86■□□□□ 0.61
SUDS3-204ENST00000543473 TFAP2CQ92754 450 aa18.86■□□□□ 0.61
SUDS3-204ENST00000543473 HIST1H2ACQ93077 130 aa18.86■□□□□ 0.61
SUDS3-204ENST00000543473 SCLYQ96I15 445 aa18.86■□□□□ 0.61
SUDS3-204ENST00000543473 PKP4Q99569 1192 aa18.86■□□□□ 0.61
SUDS3-204ENST00000543473 FAM83DQ9H4H8 585 aa18.86■□□□□ 0.61
SUDS3-204ENST00000543473 AIG1Q9NVV5 245 aa18.86■□□□□ 0.61
SUDS3-204ENST00000543473 PAQR5Q9NXK6 330 aaPredicted RBP18.86■□□□□ 0.61
SUDS3-204ENST00000543473 RIMS3Q9UJD0 308 aa18.86■□□□□ 0.61
SUDS3-204ENST00000543473 Q9Y3F1 56 aa18.86■□□□□ 0.61
SUDS3-204ENST00000543473 CPSF4LA6NMK7 179 aaKnown RBP18.86■□□□□ 0.61
SUDS3-204ENST00000543473 DLGAP1O14490 977 aa18.86■□□□□ 0.61
SUDS3-204ENST00000543473 NDUFB5O43674 189 aa18.86■□□□□ 0.61
SUDS3-204ENST00000543473 PRMT2P55345 433 aa18.86■□□□□ 0.61
SUDS3-204ENST00000543473 PITX1P78337 314 aaPredicted RBP18.86■□□□□ 0.61
SUDS3-204ENST00000543473 ST3GAL4Q11206 333 aa18.86■□□□□ 0.61
SUDS3-204ENST00000543473 VARS2Q5ST30 1063 aaKnown RBP18.86■□□□□ 0.61
SUDS3-204ENST00000543473 MARCH9Q86YJ5 346 aa18.86■□□□□ 0.61
SUDS3-204ENST00000543473 NPAS4Q8IUM7 802 aa18.86■□□□□ 0.61
SUDS3-204ENST00000543473 MND1Q9BWT6 205 aa18.86■□□□□ 0.61
SUDS3-204ENST00000543473 ASPNQ9BXN1 380 aa18.86■□□□□ 0.61
SUDS3-204ENST00000543473 SACM1LQ9NTJ5 587 aa18.86■□□□□ 0.61
SUDS3-204ENST00000543473 TAS2R9Q9NYW1 312 aa18.86■□□□□ 0.61
SUDS3-204ENST00000543473 FNIP2Q9P278 1114 aa18.86■□□□□ 0.61
SUDS3-204ENST00000543473 HAS3O00219 553 aa18.86■□□□□ 0.61
SUDS3-204ENST00000543473 SLC9A3R1O14745 358 aaPredicted RBP18.86■□□□□ 0.61
SUDS3-204ENST00000543473 PCDH7O60245 1069 aa18.86■□□□□ 0.61
SUDS3-204ENST00000543473 F2P00734 622 aa18.86■□□□□ 0.61
SUDS3-204ENST00000543473 WNT7BP56706 349 aa18.86■□□□□ 0.61
SUDS3-204ENST00000543473 NCS1P62166 190 aa18.86■□□□□ 0.61
SUDS3-204ENST00000543473 PTPRCAPQ14761 206 aa18.86■□□□□ 0.61
SUDS3-204ENST00000543473 SNX20Q7Z614 316 aa18.86■□□□□ 0.61
SUDS3-204ENST00000543473 CTU1Q7Z7A3 348 aaKnown RBP18.86■□□□□ 0.61
SUDS3-204ENST00000543473 IGFN1Q86VF2 1251 aa18.86■□□□□ 0.61
SUDS3-204ENST00000543473 DNAJC15Q9Y5T4 150 aa18.86■□□□□ 0.61
SUDS3-204ENST00000543473 MANBAO00462 879 aa18.85■□□□□ 0.61
SUDS3-204ENST00000543473 EOMESO95936 686 aa18.85■□□□□ 0.61
SUDS3-204ENST00000543473 SLC35G4P0C7Q5 338 aa18.85■□□□□ 0.61
SUDS3-204ENST00000543473 TNKS2Q9H2K2 1166 aa18.85■□□□□ 0.61
SUDS3-204ENST00000543473 VRTNQ9H8Y1 702 aa18.85■□□□□ 0.61
SUDS3-204ENST00000543473 HS3ST4Q9Y661 456 aa18.85■□□□□ 0.61
SUDS3-204ENST00000543473 IQCMA0A1B0GVH7 501 aa18.85■□□□□ 0.61
SUDS3-204ENST00000543473 A0A1W2PRB8 838 aa18.85■□□□□ 0.61
SUDS3-204ENST00000543473 LAMP2P13473 410 aa18.85■□□□□ 0.61
SUDS3-204ENST00000543473 PLA2G16P53816 162 aa18.85■□□□□ 0.61
SUDS3-204ENST00000543473 PTGR1Q14914 329 aa18.85■□□□□ 0.61
SUDS3-204ENST00000543473 PLPP4Q5VZY2 271 aa18.85■□□□□ 0.61
SUDS3-204ENST00000543473 RBM23Q86U06 439 aaKnown RBP18.85■□□□□ 0.61
SUDS3-204ENST00000543473 OAFQ86UD1 273 aa18.85■□□□□ 0.61
SUDS3-204ENST00000543473 SNX33Q8WV41 574 aa18.85■□□□□ 0.61
SUDS3-204ENST00000543473 SLC29A3Q9BZD2 475 aa18.85■□□□□ 0.61
SUDS3-204ENST00000543473 BCAS1O75363 584 aaPredicted RBP18.85■□□□□ 0.61
SUDS3-204ENST00000543473 EEDO75530 441 aaKnown RBP18.85■□□□□ 0.61
SUDS3-204ENST00000543473 TBX18O95935 607 aa18.85■□□□□ 0.61
SUDS3-204ENST00000543473 PNLIPRP1P54315 467 aa18.85■□□□□ 0.61
SUDS3-204ENST00000543473 GRIK2Q13002 908 aa18.85■□□□□ 0.61
SUDS3-204ENST00000543473 OR10H4Q8NGA5 316 aa18.85■□□□□ 0.61
SUDS3-204ENST00000543473 CXorf40AQ8TE69 158 aa18.85■□□□□ 0.61
SUDS3-204ENST00000543473 DSN1Q9H410 356 aa18.85■□□□□ 0.61
SUDS3-204ENST00000543473 C1QTNF8P60827 252 aa18.85■□□□□ 0.61
SUDS3-204ENST00000543473 ATXN7L2Q5T6C5 722 aaPredicted RBP18.85■□□□□ 0.61
SUDS3-204ENST00000543473 OXR1Q8N573 874 aa18.85■□□□□ 0.61
SUDS3-204ENST00000543473 OR13J1Q8NGT2 312 aa18.85■□□□□ 0.61
SUDS3-204ENST00000543473 ZNF431Q8TF32 576 aaPredicted RBP18.85■□□□□ 0.61
SUDS3-204ENST00000543473 PPP1R16AQ96I34 528 aa18.85■□□□□ 0.61
SUDS3-204ENST00000543473 SLC35A5Q9BS91 424 aa18.85■□□□□ 0.61
SUDS3-204ENST00000543473 CPNE5Q9HCH3 593 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms