RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 ATXN7O15265 892 aaPredicted RBP9.31□□□□□ -0.92
YBX3-212ENST00000542002 LCMT2O60294 686 aaKnown RBP9.31□□□□□ -0.92
YBX3-212ENST00000542002 CREG1O75629 220 aa9.31□□□□□ -0.92
YBX3-212ENST00000542002 KLF7O75840 302 aaPredicted RBP9.31□□□□□ -0.92
YBX3-212ENST00000542002 FKBP9O95302 570 aa9.31□□□□□ -0.92
YBX3-212ENST00000542002 ACSL3O95573 720 aa9.31□□□□□ -0.92
YBX3-212ENST00000542002 PRB1P04280 392 aa9.31□□□□□ -0.92
YBX3-212ENST00000542002 KLK3P07288 261 aaPredicted RBP9.31□□□□□ -0.92
YBX3-212ENST00000542002 CCDC166P0CW27 439 aa9.31□□□□□ -0.92
YBX3-212ENST00000542002 CD1DP15813 335 aa9.31□□□□□ -0.92
YBX3-212ENST00000542002 ALAS2P22557 587 aa9.31□□□□□ -0.92
YBX3-212ENST00000542002 PTPN4P29074 926 aa9.31□□□□□ -0.92
YBX3-212ENST00000542002 STX2P32856 288 aa9.31□□□□□ -0.92
YBX3-212ENST00000542002 SPRP35270 261 aaPredicted RBP9.31□□□□□ -0.92
YBX3-212ENST00000542002 CSRP3P50461 194 aa9.31□□□□□ -0.92
YBX3-212ENST00000542002 ARF3P61204 181 aaPredicted RBP9.31□□□□□ -0.92
YBX3-212ENST00000542002 TBPL1P62380 186 aa9.31□□□□□ -0.92
YBX3-212ENST00000542002 IL10RAQ13651 578 aa9.31□□□□□ -0.92
YBX3-212ENST00000542002 LY6DQ14210 128 aa9.31□□□□□ -0.92
YBX3-212ENST00000542002 OR4D1Q15615 310 aa9.31□□□□□ -0.92
YBX3-212ENST00000542002 TSNQ15631 228 aaKnown RBP9.31□□□□□ -0.92
YBX3-212ENST00000542002 ZC3H12BQ5HYM0 836 aaKnown RBP9.31□□□□□ -0.92
YBX3-212ENST00000542002 C16orf46Q6P387 395 aa9.31□□□□□ -0.92
YBX3-212ENST00000542002 TLDC1Q6P9B6 456 aa9.31□□□□□ -0.92
YBX3-212ENST00000542002 FAM198BQ6UWH4 519 aa9.31□□□□□ -0.92
YBX3-212ENST00000542002 TTLL10Q6ZVT0 673 aa9.31□□□□□ -0.92
YBX3-212ENST00000542002 RNF44Q7L0R7 432 aa9.31□□□□□ -0.92
YBX3-212ENST00000542002 CMC1Q7Z7K0 106 aa9.31□□□□□ -0.92
YBX3-212ENST00000542002 GPR135Q8IZ08 494 aa9.31□□□□□ -0.92
YBX3-212ENST00000542002 ARHGEF39Q8N4T4 335 aa9.31□□□□□ -0.92
YBX3-212ENST00000542002 NKAPQ8N5F7 415 aaKnown RBP9.31□□□□□ -0.92
YBX3-212ENST00000542002 ZSCAN1Q8NBB4 408 aa9.31□□□□□ -0.92
YBX3-212ENST00000542002 OR56A3Q8NH54 315 aa9.31□□□□□ -0.92
YBX3-212ENST00000542002 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.31□□□□□ -0.92
YBX3-212ENST00000542002 ANKRD7Q92527 254 aa9.31□□□□□ -0.92
YBX3-212ENST00000542002 CDKL2Q92772 493 aa9.31□□□□□ -0.92
YBX3-212ENST00000542002 N4BP2L2Q92802 583 aaPredicted RBP9.31□□□□□ -0.92
YBX3-212ENST00000542002 KIAA1143Q96AT1 154 aaPredicted RBP9.31□□□□□ -0.92
YBX3-212ENST00000542002 ALKBH8Q96BT7 664 aaKnown RBP9.31□□□□□ -0.92
YBX3-212ENST00000542002 PTERQ96BW5 349 aa9.31□□□□□ -0.92
YBX3-212ENST00000542002 MED8Q96G25 268 aa9.31□□□□□ -0.92
YBX3-212ENST00000542002 OR2A5Q96R48 311 aa9.31□□□□□ -0.92
YBX3-212ENST00000542002 UBL7Q96S82 380 aaPredicted RBP9.31□□□□□ -0.92
YBX3-212ENST00000542002 FMO2Q99518 471 aa9.31□□□□□ -0.92
YBX3-212ENST00000542002 MACROD1Q9BQ69 325 aa9.31□□□□□ -0.92
YBX3-212ENST00000542002 SELENOSQ9BQE4 189 aa9.31□□□□□ -0.92
YBX3-212ENST00000542002 GPR87Q9BY21 358 aa9.31□□□□□ -0.92
YBX3-212ENST00000542002 FUT8Q9BYC5 575 aa9.31□□□□□ -0.92
YBX3-212ENST00000542002 OCEL1Q9H607 264 aa9.31□□□□□ -0.92
YBX3-212ENST00000542002 POPDC3Q9HBV1 291 aa9.31□□□□□ -0.92
YBX3-212ENST00000542002 ARL15Q9NXU5 204 aa9.31□□□□□ -0.92
YBX3-212ENST00000542002 NOVA2Q9UNW9 492 aaKnown RBP9.31□□□□□ -0.92
YBX3-212ENST00000542002 AP1M2Q9Y6Q5 423 aa9.31□□□□□ -0.92
YBX3-212ENST00000542002 IGSF10Q6WRI0 2623 aa9.31□□□□□ -0.92
YBX3-212ENST00000542002 ZNF839A8K0R7 811 aa9.3□□□□□ -0.92
YBX3-212ENST00000542002 C21orf140B9A014 251 aa9.3□□□□□ -0.92
YBX3-212ENST00000542002 ERVH48-1M5A8F1 160 aa9.3□□□□□ -0.92
YBX3-212ENST00000542002 TAPBPO15533 448 aa9.3□□□□□ -0.92
YBX3-212ENST00000542002 P2RX6O15547 441 aa9.3□□□□□ -0.92
YBX3-212ENST00000542002 SRPX2O60687 465 aaPredicted RBP9.3□□□□□ -0.92
YBX3-212ENST00000542002 STATHP02808 62 aa9.3□□□□□ -0.92
YBX3-212ENST00000542002 EIF2S1P05198 315 aaKnown RBP9.3□□□□□ -0.92
YBX3-212ENST00000542002 HIST1H2AGP0C0S8 130 aaPredicted RBP9.3□□□□□ -0.92
YBX3-212ENST00000542002 SLC35E2BP0CK96 405 aa9.3□□□□□ -0.92
YBX3-212ENST00000542002 MYBL2P10244 700 aa9.3□□□□□ -0.92
YBX3-212ENST00000542002 STMN1P16949 149 aa9.3□□□□□ -0.92
YBX3-212ENST00000542002 HIST1H2ADP20671 130 aa9.3□□□□□ -0.92
YBX3-212ENST00000542002 GDF5P43026 501 aa9.3□□□□□ -0.92
YBX3-212ENST00000542002 RAB10P61026 200 aa9.3□□□□□ -0.92
YBX3-212ENST00000542002 CSNK1G2P78368 415 aa9.3□□□□□ -0.92
YBX3-212ENST00000542002 ABATP80404 500 aa9.3□□□□□ -0.92
YBX3-212ENST00000542002 DCDP81605 110 aaKnown RBP9.3□□□□□ -0.92
YBX3-212ENST00000542002 RHDQ02161 417 aa9.3□□□□□ -0.92
YBX3-212ENST00000542002 CDC20Q12834 499 aa9.3□□□□□ -0.92
YBX3-212ENST00000542002 BMPR2Q13873 1038 aa9.3□□□□□ -0.92
YBX3-212ENST00000542002 SLC9A5Q14940 896 aa9.3□□□□□ -0.92
YBX3-212ENST00000542002 HKDC1Q2TB90 917 aa9.3□□□□□ -0.92
YBX3-212ENST00000542002 PRTGQ2VWP7 1150 aa9.3□□□□□ -0.92
YBX3-212ENST00000542002 DEFB109BQ30KR1 87 aa9.3□□□□□ -0.92
YBX3-212ENST00000542002 FBXO48Q5FWF7 155 aa9.3□□□□□ -0.92
YBX3-212ENST00000542002 THEMIS2Q5TEJ8 643 aa9.3□□□□□ -0.92
YBX3-212ENST00000542002 MROH9Q5TGP6 573 aa9.3□□□□□ -0.92
YBX3-212ENST00000542002 PRAMEF13Q5VWM6 474 aa9.3□□□□□ -0.92
YBX3-212ENST00000542002 METTL27Q8N6F8 245 aaPredicted RBP9.3□□□□□ -0.92
YBX3-212ENST00000542002 ENDOVQ8N8Q3 282 aaKnown RBP9.3□□□□□ -0.92
YBX3-212ENST00000542002 UHMK1Q8TAS1 419 aaKnown RBP9.3□□□□□ -0.92
YBX3-212ENST00000542002 FBXL8Q96CD0 374 aa9.3□□□□□ -0.92
YBX3-212ENST00000542002 HIST1H2AHQ96KK5 128 aa9.3□□□□□ -0.92
YBX3-212ENST00000542002 HIST1H2AJQ99878 128 aa9.3□□□□□ -0.92
YBX3-212ENST00000542002 ZFYVE21Q9BQ24 234 aa9.3□□□□□ -0.92
YBX3-212ENST00000542002 H2AFJQ9BTM1 129 aa9.3□□□□□ -0.92
YBX3-212ENST00000542002 NDC1Q9BTX1 674 aa9.3□□□□□ -0.92
YBX3-212ENST00000542002 EFHD1Q9BUP0 239 aa9.3□□□□□ -0.92
YBX3-212ENST00000542002 NLNQ9BYT8 704 aa9.3□□□□□ -0.92
YBX3-212ENST00000542002 TXLNGYQ9BZA5 131 aa9.3□□□□□ -0.92
YBX3-212ENST00000542002 FAM129AQ9BZQ8 928 aa9.3□□□□□ -0.92
YBX3-212ENST00000542002 DERL2Q9GZP9 239 aa9.3□□□□□ -0.92
YBX3-212ENST00000542002 ACSS3Q9H6R3 686 aa9.3□□□□□ -0.92
YBX3-212ENST00000542002 CCDC177Q9NQR7 707 aaPredicted RBP9.3□□□□□ -0.92
YBX3-212ENST00000542002 IGSF5Q9NSI5 407 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms